Cyclopterus lumpus (lumpfish): 117737927
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Entry
117737927 CDS
T09199
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117737927 (gabra6a)
04082 Neuroactive ligand signaling
117737927 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117737927 (gabra6a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117737927 (gabra6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117737927
NCBI-ProteinID:
XP_034400067
Ensembl:
ENSCLMG00005021137
LinkDB
All DBs
Position
10:10949466..10956602
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AA seq
445 aa
AA seq
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MAILIFTFVTFVCWITLGSVHGSEKIYSDNITLILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPSEILRLNNRMVDKIWTPDSFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTITSECPMRLMDFPMDGHACPLRFGSYAYTS
SEILFTWRKGPVASVDCPAESMSLLQYDLVGQTLSSEIFKSNTGHYSVMVVHFFLKRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARESLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQKARQDTLEVLATGNDDDNASSDC
SPQEGLKRRNHSTCRSEPGDVQPLPIFLQQGSAFPQIPQLAGTSPIDKYARILFPLAFAL
FNLFYWYIYLAKDTMESARDAVLKT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccattctgatatttacgtttgttacttttgtctgctggataactcttggtagtgta
catggaagtgagaaaatttactcggacaacataactctcattttggatcgacttttggat
ggttatgacaacagattgcgacctggatccggaggtggtattacagaagtgaaaacagac
atctttgtcaccagctttggaccagtatcagatgttgagatggagtacaccatggacatg
ttcttccgtcagatgtgggttgacgagcggctaaagtttgaaggcccctccgaaatcctg
cggctgaacaaccgcatggtggacaagatctggacgccagattcttttttccgaaactcc
aagaagtccatttctcataacatgaccacaccaaacaaactcttccgcatcatgcagaac
gggactgtcctctacaccatgagactgacaatcacttcagaatgtccaatgaggctcatg
gacttcccaatggacggccacgcctgtcctctcaggtttggaagttatgcctacacaagc
agtgaaatccttttcacttggaggaagggaccagtagcatccgtcgattgtcccgctgag
tccatgagtcttctgcagtatgacctggtgggacagactttgtctagtgagatattcaaa
tcaaacacaggtcactactctgtgatggtggtccatttcttcctcaagaggaagctgggc
tactacctcatacagacttacatccctcttataatggttgttgtgctgtcacaagtctct
ttttggatcaacaaagagtctgttcctgcacgcacagttgccggcatcaccacagtgctg
accatgaccaccttgagcatcagtgcccgtgagtcactacccaaagtagcctatgccacc
gccatggactggttcatcgctgtgtgttttgcctttgtggcgtcggctcttgtcgagttt
gcggcggtcaactattttgccaccctccaggccaaccgcctgaagaagcagaaagctcga
caagacacgctcgaggtgttggctaccggcaacgatgatgacaacgcttcgtcggactgc
agccctcaggaaggcttgaagaggagaaaccactcaacgtgtcgcagtgagccaggagat
gttcagccgctgccgattttcctccagcagggctcagcttttcctcaaatcccgcagctg
gccggcactagccccatcgacaagtatgcccgtatcctctttcccctggccttcgccctc
ttcaacctattctactggtacatctacttggccaaggacaccatggagagtgccagggac
gcggttcttaaaacctaa
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