Cyclopterus lumpus (lumpfish): 117738302
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Entry
117738302 CDS
T09199
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117738302 (arhgef38)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117738302 (arhgef38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
SHE3
Ovate
Motif
Other DBs
NCBI-GeneID:
117738302
NCBI-ProteinID:
XP_034400276
Ensembl:
ENSCLMG00005011127
LinkDB
All DBs
Position
1:17014280..17026741
Genome browser
AA seq
811 aa
AA seq
DB search
MDPNEASRVEKEKDKVIKRRNRPVFLRYLERRKTDTIVAEDSAKGDFNLGTLVRRSQSDK
TEYSDKLKEKMAPHDRSTPPSPALDPEEVRSRKMNRRAKVIQELVQTEKDYLTDLELCIR
EVVQPLRNLQVVDVDRLFTNTETVCEVSAGLLHRLHQAVAEPDPEAVVIGDIFIQAKAAI
EDVYKIYCYHHDDANMSLKSYEKEEEIKQHFTTCVLALKTIYDQEGKPNLLNMGSLLIKP
VQRIMKYPLLLGELWHATPEGHPDYQPLQEAFTAAKIINVNINEFKRRKDIVTKYKRLVE
DEGTLRGKLNKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEIFDREEKLFRSLEKAVRQL
AKNVQCYLQHTQEMVSVAVQNVQDMEDIIKDPNKNHTNGSSENNGNDPYKHFKDSMERLV
LAPLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSTSSTTSSSPSLVLEDPPG
PARRDYEALNALLVEELQRFNKAAYTVLTNCVVYLVALLRGLMDQILLLAPSIQQLPAPL
SNIAEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKLAMPEVQHQTEDQRAWLLA
AYPPSRLYQLKRKCNGCQEQDLSVLEGELVALVEDTDPSGSSSRWLVRTGGTQGYVYSTF
LKQYNPLRDSQRAGQMAKEQQPQQQPQQQPLAAMLDEDFDDLSLFVSGSGSSSLRSFSLN
TTDSGSTLSGLQGEQESPEDLEETQDAEAQQFYAVHAFQARCDQELTLQEYQHVRILQFC
DLGGNKDWWLAEANGQKGYVPANYLGRMSYA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatgaggcaagccgggttgagaaggagaaggacaaagtgataaagaggagg
aaccggcccgtgttcctgcgttacctggagaggagaaagacggacactattgtggctgag
gactcggccaagggggacttcaacctggggacgctggtgaggaggagtcagtctgacaag
acggagtacagcgataaacttaaagagaaaatggctccacacgaccggtccacacccccc
tctccagcactggacccggaggaggtccgttccaggaagatgaaccgcagggcaaaggtc
attcaggagctggtgcagactgaaaaggactacctcacagacctggagctgtgcatcaga
gaggtggtccagcctctacggaatctgcaggttgtggatgtagacaggttgttcaccaac
acagagacagtgtgtgaagtttctgcagggctccttcacagactgcaccaggccgtcgct
gagcctgatccagaggcagttgtcataggagatattttcatccaggcgaaggcagctata
gaagatgtatataagatttactgttaccatcacgatgatgccaacatgtcactcaaatcc
tatgagaaagaagaagaaataaagcaacatttcaccacatgtgtattagctctgaagaca
atctatgaccaagaagggaaacccaacttactgaacatgggttcactgctcatcaaaccg
gtgcagaggatcatgaagtacccgctgctgctcggggagctgtggcacgccacacctgaa
ggtcaccctgactatcagccgctgcaagaggcgttcactgctgccaagatcatcaacgtt
aacatcaacgagttcaagagacgcaaagatatagttacgaagtacaagaggttagtagag
gatgaaggcacactgaggggcaaacttaacaagttcaacatccactctatccggaagaaa
ggagacaggtttgctggctatctcaagatccttactggagttgaaccacaggtgagagat
gaaatatttgatagagaggagaagctgttcaggagtctggagaaggctgtgaggcagctg
gccaagaatgttcaatgttacctgcagcacactcaggagatggtgtcagtagctgttcag
aatgtccaggatatggaggacatcatcaaggatccaaacaaaaatcacacaaacggctct
tcagaaaacaatggaaatgacccatataagcactttaaagacagcatggagcgcttggtc
ctcgcccccctctcctccctgcaaggcatgttcaccgctccacagaagctcatccagaag
cgatatgacaagttgctcgattactgcagccgcctggagcgctcttcttctttttcatcc
tcgtccacgtcatccaccacttcttcctcaccttcactggtgttagaagacccacccggt
cccgccaggagggactatgaagctctcaatgccttgctagtggaggagttgcagaggttc
aacaaggccgcctatactgtcctgacaaactgtgtggtgtatctagtggccctgctccga
gggctaatggatcaaatactactgctggccccatccatacagcagctaccagctccattg
tcaaacattgctgaagtgcagaacagcatcatggacgagctgaacaatctgaccttcgtc
aaggacaacgcacagaagttgatggagcgaaaagtcagctttgagagacaacgggacaag
aaattagcgatgccggaggtgcagcatcaaaccgaggaccagcgagcctggctgctggca
gcatatccacccagccgtctgtaccagctgaagaggaagtgtaatggctgccaggagcag
gacctcagcgtgctggagggagagctggtagccctggtggaggacacagacccatcaggc
agcagcagccgctggctcgttcgcactggaggcacacagggctatgtctattccacattc
ctgaagcagtacaaccctctgagggactcgcagcgggccggccagatggcaaaagagcag
cagccgcagcagcagccgcagcagcagccgctggccgccatgctggatgaggacttcgac
gaccttagcctgtttgtgtcaggcagcggcagcagcagcctgcgcagcttcagcctcaac
accaccgacagtggctctaccctctctggactgcagggggagcaagagagccccgaagat
ctggaggaaacacaagacgcggaggctcagcagttctatgccgtgcatgcatttcaagcc
cgctgtgaccaggagctgaccttgcaggagtaccagcatgtccgcatccttcagttctgt
gacctcggaggcaataaggattggtggttagccgaggccaacggacagaagggatacgtt
cctgccaactaccttggcaggatgtcctacgcataa
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