Cyclopterus lumpus (lumpfish): 117738558
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Entry
117738558 CDS
T09199
Symbol
pnpla6
Name
(RefSeq) LOW QUALITY PROTEIN: patatin-like phospholipase domain-containing protein 6
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117738558 (pnpla6)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
117738558 (pnpla6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
DUF4736
MscL
STE2
Motif
Other DBs
NCBI-GeneID:
117738558
NCBI-ProteinID:
XP_034400322
Ensembl:
ENSCLMG00005000515
LinkDB
All DBs
Position
1:9016649..9043541
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AA seq
1349 aa
AA seq
DB search
MGQSTSEQEVQGDVTSEDEFDNIKTLVEEELQTSMMVGMVIGAGIAIILIAILIFFTLRR
IQLRNIEAQEAPKYRFRKRDKVMFYGRKIMRKVSQSTSSLVGTSSSSRQRLKKKQKMLNI
AKKILRFKKEVPILQAKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKPLF
LELCKHMVFVQFQQGEYVFRPGQPDSSIYVVQDGKLELCLTGGDGKESVVKEVYPGDSVH
SLLSILDVITGHQKPYRTVSARAAEVSTVLRLPVEAFLAIFEKYPESLVRVVQIIMVRLQ
RVTVLALHNYLGLTNELFSHEMQPSRLPPPSPHPTRTSPIRHGKRFGSLTVTEEHREAAI
KGEAAGGEQGKDGSTVPTLSRTISMPVDIAGMQKSLRSDLTXGYERGRISVSAEDGNTPP
TFTRSVSQDQRERKVTVDEVPSGIYLYPEEEPGVDNIFTPVSCRSNAALFEEAQKEIXKL
MKIEDPSLLNGKVTLHNAKAGAVLARQGDQDVSLHFVLSGCLHVYQRMIDKQEAVCLFVT
HPGEMVGQLAVLTGEPLISPSRPSADCTYLKISKSDFYEIMREQPSVVLSAAHTVAIRMS
PFVRQMDFAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVIRKANGKKELVGEYGRGD
LIGVVEALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVTRLIHLLGQKILGNLQ
HGRGPFSGSALSLPQYTASADVTNPASNLSTVAVLXVCDEVPINAFNLELSHALSAIGPT
LLLTSEIIRERLGASALDSVHEYRLSGWLAQQEDINRIVLYQTDNTMTPWTQRCIRQADC
ILIVGLGDQEPALGELEQMLENTAVRALKQLVLLHKEDGPGPSRTVEWLNMRSWCXGHLH
LKCPRRVFSRRSPSKLREVYEKVFEKTADRHSDFSRXARVLTGNSIAVVLGGGGARGCSH
VGVIKAMEEAGIPIDIVGGTSIGSFIGALYAEERSGCENQTESQRVSKAMNSVFKTVLDL
TYPITSMFSGSAFNTSIYKVFQDKQVEDLWLPYFNVTTDITASAMRVHQDGSLWRYVRAS
MTLSGYLPPLCDPKDGNLLMDGGYINNLPADIARTMGARTVIAIDVGSQDETDLCNYGDS
LSGWWLLWKRINPWAEKVKVPDMAEIQSRLAYVSCVRQLEVVKKSAYCEYIRPPIDRFKT
MDFGKFDEIHDVGYQHGKLLFTGWARGDIIENMLKDHRSADYNDSKRTDSCTCPGADFTD
LAEIVSRIEPVQTYVAAEADESDCLTEYEEDGMDTVREEEGEEEEEEDLEDHSPGEWAXN
GVFQTDEEKSVRQRRKLASDSNTSEVSDC
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagtacctcggaacaagaggtccaaggagacgtcaccagcgaggacgagttt
gataacatcaagactcttgtggaggaggaactacagacgagcatgatggtggggatggtg
attggtgcgggcatcgccataatcctcattgccatcctcatcttcttcaccttgcggagg
atccagcttcgaaacattgaagctcaggaggcacccaaataccgctttcgcaagagggac
aaagtcatgttctatgggcgaaagatcatgcgcaaagtctcgcagtctacctcttccctg
gtgggtacatcctcttcctctcggcagcgcctgaagaagaagcagaagatgcttaacatt
gccaaaaagatcctgcgctttaagaaggaggtgcccatcctgcaggccaaggagccccca
ccctcagtgctggaggctgacctcaccgagtttgatgtggccaactcccacctcccctct
gaggtgctctacatgctcaaaaatgtccgtgtgctaggtcactttgagaagcccctcttc
ctggagctgtgtaaacacatggtgtttgtgcagttccaacaaggggagtacgtcttcagg
ccgggccagcctgacagcagcatctacgtggttcaggatggaaaactagaattgtgcctt
actggtggggacggcaaagaaagtgtggtgaaggaggtttaccccggagacagtgtccac
agcctcctcagcatcctggatgttatcacaggccaccagaagccttatagaactgtgtcg
gcacgggctgcagaggtttccactgtcctccgtttacctgtagaggccttcctcgctata
tttgagaagtacccggagagcctggtgcgggtagtacaaattatcatggttcgtctccaa
agagttacagtcctagccctgcacaactatctggggctcaccaatgagctctttagccat
gaaatgcagccctcgcgcctgccacctccgtctcctcacccaactcgcaccagtcccatc
cggcatggtaagcgctttggcagcctgaccgtaactgaggagcatcgggaagccgccatt
aagggagaagctgcaggaggggaacaagggaaggatggctcaacagtgccaactctgagc
aggaccatctcaatgcctgtggacattgctggtatgcagaaaagtctgcgatcggacttg
acanntggctacgaaagggggcggatatctgtctctgcagaggatggcaacacaccacct
acgtttactcggtctgtgtcccaggaccagcgggagaggaaggtgacagtagacgaggtt
ccctcagggatctatctgtacccagaggaagagccgggagtggacaatatttttacacct
gtatcctgtcgatccaatgctgctttgtttgaggaagctcagaaagagatcntcaaactc
atgaagattgaggacccatccttgttaaatgggaaagtgactctacacaacgcgaaagca
ggagctgtcttagccagacagggagaccaggacgtgagtctgcactttgtcctttctggt
tgtcttcatgtctaccagcggatgattgacaagcaggaagccgtctgcttgtttgtgacc
cacccgggggagatggtgggccagctcgctgtgctcactggagagcccctcatctcacca
tcaaggccatccgcggactgtacttacctgaagatctcaaagtcggatttctatgagatc
atgagggagcagcccagtgtggtgctgagtgcggctcacacagtggccatccgcatgtcc
cctttcgtcaggcagatggacttcgctattgactggatggccgtggaggccggcagagcc
ctctaccgacaggacgaccagtcagactgcacatacattgttctgaatggacgtctacgt
tcagtcatccgcaaggcaaatggcaagaaagaactcgttggggaatacggcagaggagac
ctcattggagtggtggaggccttgaccagacagccaagagccaccaccgtccacgctgtg
agggacacagagctggtcaaactgcccgagggaacgctcaacaacatcaaaagacgatat
ccccaggtggtgaccaggttgatccacctgttgggccagaagattctggggaatctgcag
cacggtcgagggcccttttcaggttcagccttgagtctgccccaatataccgccagtgct
gatgtcaccaaccctgccagcaacctctccactgtggctgtcctgnctgtatgtgatgag
gtgccgatcaacgcattcaacctggagctcagccatgccctcagtgccattggccccact
ctgctattgaccagcgaaataatcagagagcgactgggtgcctctgctttggacagtgtc
catgagtaccgtctctccggctggctggcccagcaagaggacatcaatcggattgtcttg
taccagactgacaacaccatgaccccctggactcagcgctgcatccgccaggctgactgc
atcctcattgtcggcctgggcgaccaggaacctgccctgggagagttggagcagatgctg
gagaacacagcggttcgggcgctgaagcagctggtccttctgcacaaagaggatgggccg
ggcccctccaggacggttgagtggctcaacatgcgaagctggtgcntcggtcatctgcac
ctcaagtgtccccgcagggtcttctccagacgcagccctagtaaactaagggaggtatat
gagaaggtgtttgagaaaacggcagacaggcacagtgatttctctcggncggcccgagtc
ctgactggaaacagcatcgccgtggtgttgggaggagggggagccagaggctgctctcat
gtgggtgtgatcaaagctatggaggaagcggggattcctattgacatagtaggcgggacg
tcaattggctcatttattggagcgttgtacgctgaggagaggagtggctgtgagaaccaa
acagagagccagagagtgtccaaggcaatgaactctgtattcaaaacagtcctggacctg
acttatcccatcacctcaatgttctctggttctgccttcaacaccagcatctacaaagtg
ttccaggacaagcaagtcgaggacctgtggctgccatacttcaacgtcaccactgacatc
acggcctcagccatgcgtgttcaccaggatggctctctgtggcgctatgtacgggcgagc
atgaccctctctgggtacctgccgcctctctgcgaccccaaagatggaaacttgctaatg
gacggtggctacatcaacaacctgccagcggacattgcaaggaccatgggggccagaaca
gtcattgccattgatgtgggtagccaagacgagaccgacctctgtaactatggcgacagc
ctgtctggctggtggttgctgtggaaacggatcaatccctgggcagagaaagtaaaggtg
ccagacatggcagagatccagtcccggttggcctacgtgtcttgtgtgcggcagttggag
gtggtgaagaagagtgcctactgcgagtacatccgaccgcccatcgaccgcttcaagacc
atggacttcggcaagtttgacgagatccatgatgtgggctaccagcacggcaagctgctg
tttactggctgggcccgaggcgacattatcgagaacatgctaaaggaccaccgctcagcc
gactacaacgacagcaagagaactgactcctgcacgtgtccaggagctgacttcactgac
cttgcagagattgtatcgaggatagagccggtccaaacctacgtagctgcagaagcggat
gaatcagactgtctgacagagtatgaggaagacgggatggacacggtgagagaggaggag
ggggaggaagaagaggaagaggaccttgaggaccactcccctggagagtgggccnagaat
ggagtctttcagactgatgaggagaaatcagtgagacaacgcaggaaactcgccagtgac
tccaacacctctgaagtctctgactgctga
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