Cyclopterus lumpus (lumpfish): 117738559
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Entry
117738559 CDS
T09199
Symbol
efna1a
Name
(RefSeq) ephrin-A1a isoform X1
KO
K05462
ephrin-A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117738559 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117738559 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117738559 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117738559 (efna1a)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117738559 (efna1a)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117738559 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Others
117738559 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117738559
NCBI-ProteinID:
XP_034400320
Ensembl:
ENSCLMG00005016866
UniProt:
A0A8C2ZZD7
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All DBs
Position
11:complement(7079024..7092831)
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AA seq
229 aa
AA seq
DB search
MDLVWIVGFVVSVCAWFTSAERHSVYWNSTNPKFLWDDYTVEVKLNDYLDIVCPHYPQGE
VPLLDAERYVLYMVEREDYDSCKPQSYDQMRWECGHPFAPHAPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLRVDVVAADGSQEARVAKGGTGGAVVGAGAGGGVHN
PSNRLPAADDPVVILPDVQKSARSNSVATAASLSVLSLLVPSSLLLLLH
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtctggattgtgggcttcgttgtgagcgtctgcgcctggttcacttcagcg
gagcggcacagcgtctactggaacagcacgaaccccaagtttctatgggacgactacacc
gtggaggtgaagctcaacgactacctggacatcgtctgcccccactaccctcagggggag
gtgccactgctggatgctgagcgatacgtgctctacatggtggagcgcgaggactacgac
tcctgcaagccccaatcgtacgaccagatgcgttgggagtgtggtcatccgtttgccccc
cacgcccctgagaagttctctgagaagttccagcggtttaccccgttcactctgggaaag
gagtttcgtcaaggagaaagctactattatatctccaaaccgttgcaccatcatggacag
gagtgcctcaggctcagggtggacgtcgtagctgctgatggctctcaagaggccagagtg
gctaaaggaggcacgggtggggctgtagttggagctggagctgggggtggggttcacaac
ccgtccaacagactgcctgcagcagatgacccagtggtaatcctgccggacgtccagaag
agcgcgcggtcaaactctgtggcgacggctgcgtccctctcggttctctccctgctcgtc
ccatcttcattactgctattgttgcactga
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