Cyclopterus lumpus (lumpfish): 117738570
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Entry
117738570 CDS
T09199
Name
(RefSeq) double-strand-break repair protein rad21 homolog A-like
KO
K06670
cohesin complex subunit SCC1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117738570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117738570
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117738570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
117738570
NCBI-ProteinID:
XP_034400339
Ensembl:
ENSCLMG00005001929
LinkDB
All DBs
Position
11:5884235..5890506
Genome browser
AA seq
633 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDIAQQFNLNQSRVEEITMREEVGNLNLLQDNDFADFGMDDRELMREESAFAVD
MMGVSASNLLLEADGGANAMADKSNHLEYDDQYKDDFGDNPMESTEEGMLVDKLLSHEDG
DGIFDDPPADPPAIAESVMMPQDHGDDDDDFDALSAGAPDSPDSGPTKTLPAMADQAEQT
TLVHNEEETFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLA
PPTKKLMMWKETGGVEKLFSLPAQPLWNSRLLKMFTRCLTPLVPDELRKRRKGGEADSLD
EFLKDLENPEVPREETAGHQQGDIMDQTLMEEASVLQTSAVEGSRTTLDESVMPPPSPQR
GLKRKAQDTEPALPQQQGSMNVSQQLEASSVDLPPEETISQMIELDLLGDKDKKKNDGDD
SDDEEEVQGDQDQEERRWNKRTQQMLHGLQRVMAKTGAQSVGLLDLCRNNNKKQAAAKFY
SFLVLKKQQAVELVQEEPYSDIVATPGPRFHII
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccactttgtcctcagcaaacgtgggccgctggccaaaatctggctggcg
gcccactgggacaagaagctgaccaaggcacacgtgtttgagtgcaacctggagagcagc
gtggagagcatcatctcacccaaggtgaaaatggctttgcggacatcagggcatctgctg
ctgggggtggtgaggatctaccacaggaaggccaagtacctgctggcagattgtaacgag
gccttcatcaagatcaagatggcgtttcgaccaggcgtggtagatcttcccgaggagaac
cgagaagcagcctacaacgccatcacgctgcctgaggagttccacgactttgaccagcca
ctaccagacctcgatgatattgacattgctcagcagttcaacttgaaccaaagcagagtg
gaggaaatcactatgagggaggaggtgggcaacctcaacctgctgcaggacaatgacttc
gctgactttggtatggacgaccgggagctgatgcgggaggagagtgcgttcgcggtggac
atgatgggcgtgtcggcttccaacctgctgctggaggctgatggtggcgccaacgcgatg
gctgacaagtccaaccatctggagtacgatgaccagtacaaggacgacttcggagacaat
cccatggagagcactgaggaaggcatgcttgtggacaagctgctgagccacgaggatgga
gacggcatctttgacgaccctcctgccgaccctcctgccatcgcagagagtgtgatgatg
cctcaggaccacggagacgacgacgacgactttgatgctctctcagcgggagccccagat
agtccagactcaggcccaacaaagaccctaccagccatggcagaccaggccgaacagacc
accctggttcacaacgaggaagaaaccttcgctctggagccgatcgacatcacagtgaag
gagaccaaggcgaagcgtaagaggaagctgattgtggacagcgtgaaggagttggacagt
aaaaccatccgtgcacagctgtctgattactctgacattgtcaccaccctggacctggca
cctcccaccaagaagctgatgatgtggaaggagacggggggagtcgagaagcttttctct
ctccccgctcagcctctctggaacagcaggctgctgaagatgttcacaaggtgtctgaca
ccactggtgccagacgagcttaggaagaggaggaaaggtggagaggctgacagtctggat
gagttcctcaaggatctggagaacccggaggtgcccagagaggaaacagcaggacaccag
cagggagacatcatggaccagaccctcatggaagaggccagtgttctgcagacttccgct
gtggaaggcagcaggacgacgctggacgagtcagtcatgccccctccgtcgccccaacgt
ggcctcaaacgcaaagcccaggacacagaacccgccctgcctcagcagcagggatccatg
aatgtgtcccagcagctggaggcatccagcgtggatctgcccccagaggaaaccatcagc
cagatgatagagttggacctgctcggagacaaggacaagaagaagaacgacggcgacgac
tctgatgacgaggaggaggtgcagggagaccaggaccaggaggagaggcgatggaacaaa
aggacccagcagatgctccacggcctccagagggtgatggccaaaacaggtgcccagtcg
gtcggcctgctggatctgtgcaggaacaacaacaagaaacaggcggccgctaagttctac
agtttcctggttctgaagaagcagcaggcggtggagctcgtccaggaggagccttacagc
gacatcgtagctacgcccggacctcgcttccacatcatctag
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