Cyclopterus lumpus (lumpfish): 117738584
Help
Entry
117738584 CDS
T09199
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117738584 (top2b)
03036 Chromosome and associated proteins [BR:
clum03036
]
117738584 (top2b)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117738584 (top2b)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Topoisomerases
117738584 (top2b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
117738584 (top2b)
Centrosome formation proteins
Centriole proteins
117738584 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
117738584
NCBI-ProteinID:
XP_034400383
Ensembl:
ENSCLMG00005009292
LinkDB
All DBs
Position
11:complement(16373467..16398244)
Genome browser
AA seq
1698 aa
AA seq
DB search
MSNGAAGSGGVPWMEAANGRDDAGKMEGAKKDKAASKLSVERVYQKKTQLEHILLRPDTY
IGSVEPITQQMWVFDEEIGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMTGIKITVD
PESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRHSFKQTWQNNMSKASEPKIKFFDGDDFTCVTFQPDLSKFQMEK
LDKDLVALITRRAYDVAGSCKGVKVTLNGKKLPVTGFRSYVDLYVKDKVDETGVALKVVN
ETVNDRWEVCLTLSEKGFQQIGFVNSIATTKGGRHVDYVVDQIVSKLIEVVKKKNKAGVT
VKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCVLSDKFVRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSGECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYEDPESLKS
LRYGRIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKSKQEFSFY
SIPEFDEWKKNTENFKTWHIKYYKGLGTSTSKEAKEYFADMEKHRITFRYSGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGNQERHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPSGDSNLLKFLY
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDTREIVNNINRMLNQQDPLPMLP
KYKNFKGTIHELGQNQYLVSGEVMVIDRNTIEITELPVRTWTQAYKESVLEPMLQGTDKT
PALILDYKEYHTDATVKFVVRMSEEKLAQAELIGLHKVFKLQSSLTCNSMVLFDNMGCLK
RYDSVQDMLREFFELRLHYYKLRKDWLQGSLGAEAAKLSNQARFVLEKIEGKVSIENKTK
RELIRMLVQKGYESDPVVAWSKSQEKAQEEEDRDGNESDGSVDSGSSAGPNFNYILNMPL
WCLSKEKVDDLLKQRDHKRAELSDLQKKLPDDLWKEDLALFVEELDKVERQEREDQSIGK
AVKLVKGKVGKPKAKKLNLEETLPSPFGRRVEPPTQAIRADAAKKLSRKKKSDIDPALKL
ELDEEGLPIEGAARDTSVVKPKPPRVKREKKEPGAPRVRKPPAPKGTPVKKAKKRNPWSS
DESKSDSDAEDSQPIVPRETKSQRASASKPKYTFDFSEEEEEADEEENGADDVASSPMAS
FKDEFPSSETKVRFDDHNEDEEEDDNEDPYSPPKIKTTAAAPAAKNKETASIFSSKSAFS
EKSNDSAAPRVRKPPAPKGTPVKKAKKRNSWSSDESKSDSDAEDSQPIVPRETKSQRASD
GSKSDSDADDAPVFATHSAFDQLLPAKKGPVAAKKPSDAAPKPKKPPAPKAKKPDKSIWD
SDSDTGSKKPAPALKGKGRGRKRKGSGSEDEYNPVKKAAKLVGRKPQKPASDDEDDSNSL
SAMDARAYGGPMAGAAFGGAMAGGATAGGGATGRGATAGGGATGGAASRDRPGRAKKEVK
YFAESDIGEIDEDDDLFY
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtgtgccgtggatggaggctgcgaatggccga
gatgatgctggcaagatggaaggtgccaagaaagacaaggcggcctccaagttgtctgtg
gagcgagtgtaccagaagaagacccaactggagcacattcttctccgtccggacacgtac
atcggctccgtggagccgatcactcagcaaatgtgggtttttgatgaagaaataggaatg
aaccagagggaaatcacctacgttcctggactgtacaaaatctttgatgaaattcttgtc
aacgcagcagacaacaaacaaagggacaagaacatgaccggaataaagatcaccgttgat
cctgagtccaacaccatttctatctggaacaacggtaaaggaatacctgtggtggagcac
aaggacgagaagatgtacgtgccggctctcattttcggccacctgctcacctccagcaac
tacgacgacgatgagaaaaaggtcacgggtggaaggaacgggtacggtgctaaactctgc
aacatcttcagtaccaagttcacggtagaaaccgcctgcaaggaatacagacacagtttc
aagcagacgtggcagaacaacatgagcaaagcttctgagcccaagatcaagttcttcgac
ggggacgacttcacctgcgtgaccttccagccggacctgtccaagttccagatggagaag
ctggacaaggatcttgtagcgctcatcacccgcagagcatacgatgtagccggttcctgc
aagggagttaaagtcacgctgaacgggaagaaattacctgtgaccggcttccgcagctat
gtggatctgtacgtgaaggacaaagtggacgagacgggcgtcgctctgaaggtggtgaac
gagactgtgaatgaccgctgggaggtttgcctcaccctgagcgagaagggcttccaacag
atcggcttcgtcaacagcatcgccaccaccaagggtggcagacacgtagactatgtggtg
gaccagatcgtgtccaaactcattgaagtagtgaagaagaagaacaaggctggagtgaca
gtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaacgcactgatcgagaac
cccaccttcgactcccagaccaaggagaacatgacactccagaccaagagcttcgggtcc
aagtgcgttctgtcggacaagttcgtcagagctgcaaccaactgcgggatcgttgagagt
atactcaactgggtgaagttcaaagctcagacacagctcaataagaagtgctcatctgtg
aagtacagcaagatcaaaggcatccccaagctggacgacgccaatgatgccggtggaaaa
cactccggcgaatgcacactcatcctcaccgagggagactcggccaagtctctggccgtc
tccggactcggggtcatcgggcgtgatcgctacggagttttccccctgagaggaaagatc
cttaatgtgcgagaggcgacgcacaagcagatcatggaaaatgctgaaattaacaatatc
atcaagatcgttggcctccagtacaagaagagctacgaagaccccgagtccctgaagagc
ttgcgctacggcaggatcatgatcatgaccgatcaggatcaagatggctcccatatcaaa
ggtctgcttatcaacttcttccaccacaactggccgtctctactgaaacacacattcctg
gaggagtttatcacgcccattgtcaaagtcaccaagagcaagcaggagttttccttctac
agcattccagagtttgacgagtggaagaaaaacacagagaactttaaaacctggcatata
aagtactacaaaggtttgggtacaagtacaagcaaagaggcaaaggagtactttgctgac
atggagaagcatcgcattacgttcagatacagcggcgccgaggacgacgctgccatcacg
ctggccttcagtaagaagaagacggacgacaggaaggagtggctgactaacttcatggaa
gacagacgccagaggaggatgcacggcctgccggagcaatacctgtatggcaatcaggag
aggcacctttcctacaacgacttcatcaacaaagagctgattctgttctccaactccgac
aatgagagatccatcccatccttggttgacggtttaaagccaggccagaggaaggtgctt
ttcacctgcttgaagaggaacgacaagagggaagtgaaggtagcacagctggccggttca
gttgcagagatgtctgcctaccatcatggagagcaagctctcatgatgaccatcgtgaac
ttggcccagaacttcgtgggcagtaacaacgtgaacatcctgcagccgctgggtcagttc
ggtactcgcatcaatggaggaaaagacgctgccagcccccgttacatctttaccatgctt
agtccacttgccaaactgctgttcccgtctggggattccaacctgctcaagttcctgtac
gacgacaaccagaaggtggagcccgagtggtacattcccatcatcccaatggtgctcgtc
aacggcgccgagggcatcgggaccggctgggcgtgcaagatccccaactacgacacgcgg
gagatcgtcaacaacatcaaccgcatgctcaaccaacaggaccccttgccgatgcttccc
aagtacaaaaacttcaaagggacgatccatgagctgggtcagaaccagtacctggtcagt
ggagaggtgatggtcattgacagaaacaccatcgagatcacagagcttcccgttcgaacg
tggacacaggcgtataaggagtctgtgctggagcccatgctgcagggcactgacaaaacg
ccagctctcatccttgattataaggagtaccacacagatgccacagtcaagtttgtggtt
cgcatgtccgaggagaaactggcccaggccgagttaatcgggcttcacaaggtcttcaag
ctgcagtccagccttacctgcaactcgatggtgctgtttgacaacatgggctgtctcaag
aggtatgattcggtccaagacatgctcagggagttctttgagctccgcctgcactactac
aaactgaggaaggactggttacagggcagcctgggagccgaggccgccaagctgagcaac
caggctcgcttcgtactggagaagatcgaaggaaaagtttcaatcgagaacaaaaccaaa
cgtgaactgatccgcatgctcgtgcagaaaggctatgagtccgatccggtggttgcctgg
tccaagtctcaggaaaaggcgcaggaagaagaggaccgtgacggaaacgagagcgacggc
tcggtggactcgggctcctcggcaggcccaaacttcaactacatcctcaacatgcctctg
tggtgcctgtctaaagagaaggtggacgacctgctcaaacagagggaccacaagagagca
gagctgagtgatctccagaagaagcttccagatgatctgtggaaggaggacctggctttg
ttcgttgaggaactggacaaagtggagcgccaggagcgagaggaccagagtataggaaag
gccgtcaaactggtgaaggggaaggtgggcaaacctaaagccaagaagttgaacctggag
gagaccttgccctcgccgtttggtcgcagggtggagcctccgactcaggccatcagagcc
gacgcagccaagaaactgtccagaaagaagaagagtgacatagatcctgcgctgaagttg
gagcttgatgaggagggtttgcccattgagggagcagcaagagatacctctgtagtgaaa
ccaaaacctccacgagtcaagagagagaagaaagagcccggagcaccaagagtgagaaaa
cctccagcacccaaaggtacccccgttaagaaggcgaagaagaggaacccctggtcctcg
gacgagtccaagtcagacagcgacgcggaggacagtcagcccatcgtcccccgagagacc
aagtcccagagggcatcagcttccaagccgaaatacacgtttgacttctcggaggaggag
gaagaggcggacgaggaggagaacggcgccgacgacgtggcttcttctccgatggcgtcc
tttaaagatgagttcccttcctctgagaccaaggtgcgcttcgacgaccataacgaggat
gaagaggaggacgacaacgaagacccctactcgcctcccaaaataaagaccacggctgct
gcacctgcagctaaaaataaagagacagccagcatcttctcgtccaagtcagccttctct
gaaaaaagcaatgacagtgcagcaccaagagtgagaaaacctccagcacccaaaggtacc
cccgttaagaaggcgaagaagaggaactcctggtcctcggacgagtccaagtcagacagc
gacgcggaggacagtcagcccatcgtcccccgagagaccaagtcccagagggcatcagat
gggtccaagtccgacagcgacgccgacgacgcccccgtgttcgccactcactctgcattc
gaccaactactgccagcaaagaaaggccctgtagcagctaagaagccctcggatgcagct
cccaaaccaaaaaagccaccagcaccaaaagcgaagaaaccagataaatccatctgggac
tctgactccgacaccggctccaagaagcctgcaccagctcttaaaggtaaaggccgaggg
aggaagaggaagggctccggctctgaagacgagtacaatccagtgaaaaaagcagcaaaa
cttgtcggcagaaaacctcagaaaccggcatcagacgacgaggacgacagcaacagcctt
agtgcgatggacgccagagcatacggtggtccaatggccggcgctgcgttcgggggtgcg
atggccggcggcgcgacggccggtggcggcgcaacgggccgcggtgcgacggccggtggc
ggcgcaacaggcggcgccgcatcccgcgaccggccgggccgggccaagaaggaggtgaag
tactttgccgagtcagacatcggggaaatagacgaagacgacgacttgttctattaa
DBGET
integrated database retrieval system
