Cyclopterus lumpus (lumpfish): 117738629
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Entry
117738629 CDS
T09199
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117738629 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117738629 (clasp2)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117738629 (clasp2)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117738629 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
TAN
Motif
Other DBs
NCBI-GeneID:
117738629
NCBI-ProteinID:
XP_034400480
Ensembl:
ENSCLMG00005004231
LinkDB
All DBs
Position
11:10849674..10904982
Genome browser
AA seq
1523 aa
AA seq
DB search
MEDHDNMDYFYQQVVQKDVTRRLQVGQDLIDYLNDPNRSPDVEQDKPRLDKTMDELTGWV
NSSNFKVALVGIDICGAFVERLGERFRGYLGTVLPALVDRLGDGKDQVRENSQAVILRCM
EQTASPMYVWERLLPGFKHKNFRSREGICLCLSATLSTYGAQPLSLSKLVPHLCSLTGDQ
NPQVREASIATLVDVYRHVGEKVRADLAKRGLSAARLQTLFARFDEALNSGNMALSPSHD
RSFEDDDSVDGNRSSSAQAAFKVPKVPKKPAESSAARRPSATGGKLVSKESAGGVDEEDF
IRAFTDVPSVQIYSARDLEDNLNKIREICSDDKHDWDQRAHAMKKVRSLLVAGATNYDCF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSSVLGNKFDHGAEAIVPVLFNLIPNCA
KVMATSGMLAIRIIIRHTHVPRLIPLITSNCTCKSVAVRRRCFDFLELLLQEWQTHSLER
HTAVLVESIKKGIRDADSEARVEARKAYWGLRNHFPAETDALYNSLEPSYQKTLQSCLKS
SGSVASLPQSDRSSSSSQESLNRPLTSKWTSTPGRVPAGSTGGLSSASLQRSRSDVDVNA
AAVAKHRHVGQTRVTGRLPPGSYSSLGTRSDNGRVRTKQPLSTASSVSSQVDSRGRSRTK
MVSQSQPGSRSGSPGRVLTSTALSTMSSGTHRVLAGSSGDKTRRSRIPRSQGCSRDSSPT
RLSVAPSSISSIYNGASKGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLATRSY
SRSTGALHTPDTFGAAGSSFGISQSSRLSSSVSAMRILNTGSDVEEALADALKKPARRRY
ENSSMYSDDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEG
LLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRDSGRVYGTAESGISSASFKRVFS
MFLETLVDFIHVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDVTRESFPNDLQ
FTILMRFTVDQTQTPNLKVKVAILKYIDTLTLQMEAPDFVNSSETRLAISRIITWTTEPK
SSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGATRLLQNHLKNTGNAAQAPMGSP
LTRHTPRSPASWSSPVTSPTNTSQNTPSPSAFDYDTENMNSEDIYSSLKGVTEAIQNFSV
RSQEDMNEPVHRREGEEGDSGTDGRLSDFVDGGRMALDNKTSLLNTPLLSSSPRGAREHF
SDSPFKHSRKDTSMDDSEHLTHDSSLDQSELVAELLKELSNHNERIEERKTALRDLLKLI
RENTLQVWDEHFKTILLLLLETMGDREHVIRTLALRVLREILSKQPWRFKNYAELTIMKA
LEAHKDPHKEVVRAAEETAAMLALSISPDQCVKVLCPIIQSADYPIDLAAIKMQTKVVER
VPREGLMSLLPEIVPGLIQGYDNSESSVRKASVFCLVAIYAVIGEDLKPHLNQLSGSKLK
LLNLYIKRAQSGSSGSEPPSEGL
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatgacaacatggactatttttaccagcaggtagtgcagaaagatgttacc
cgtaggttgcaggtcggccaggacctcattgactacctcaatgacccgaaccgctccccg
gacgtggagcaggacaaaccccgcctggataagaccatggacgagctgacgggatgggtg
aactccagcaatttcaaggtggctttggtggggatagacatctgtggtgcgtttgtggaa
cgcctgggagagcgtttcagaggatacctgggcacagttttgccagctttggtggacagg
ctgggcgatgggaaggaccaggtcagggagaacagccaagctgtcatccttcgctgtatg
gagcagactgcctcgcccatgtacgtttgggaaaggctacttcctggttttaaacacaag
aacttccgcagtcgagaaggaatctgcctctgtctcagtgccacgctcagcacgtacgga
gcccagccattgagcctcagtaaactagttcctcatctctgctctctgactggagaccag
aacccacaggtacgtgaggcctccatagcaacattggtggatgtttatcgtcacgttgga
gagaaagtccgagcagacctggcgaagagaggtctgtcagctgcacggttacagacgtta
ttcgctcgttttgatgaagccttgaattcaggcaacatggctctcagcccgagtcacgat
cgtagttttgaagatgatgacagtgtggatgggaatcgttcttcctcagcccaggctgcc
ttcaaggtcccaaaagttcccaagaagcctgcagagtcctctgccgcacgcaggcccagc
gctaccggtggcaagcttgtatccaaggaaagtgcagggggagttgatgaagaggacttc
attagagctttcacagatgttccctctgtccagatttactcagcgagggatcttgaagac
aacctgaataagatccgtgagatctgctctgatgacaaacatgactgggaccagagagcc
cacgctatgaagaaggtccgctcactgctggtggcgggcgcgacgaattacgactgtttc
taccagcatctacggctactggacggagccttcaaactgtccgctaaagacctgcgctca
caagttgtccgagaggcctgcatcactgtggcctacctttcatcagtgctggggaataaa
tttgaccatggagcggaagctattgttcccgtcctgttcaacctcatccccaactgtgcc
aaagtcatggccacctccggtatgttggctattcgcatcatcatacggcacacccacgtc
cccaggctcatccccctgatcaccagcaactgcacatgcaagtctgtggctgttcgaagg
cgctgttttgatttcctggaacttctgctacaggaatggcaaacccactctctggagagg
cacacggcagttctggttgagagcatcaagaagggaattcgagatgcagactcagaggct
agagtggaggctcgcaaggcctactggggtctgaggaaccactttccagcggagaccgac
gctctctacaactccctggagccatcgtaccagaagacccttcagtcctgcttgaagagc
tctggcagtgtggcctctcttccccagagtgaccgctcctcgtcctcctctcaagagagc
ctcaatcggcctctgacttctaaatggacatcaactccaggccgagtccctgcgggttca
acgggtgggttgtcgtcggcctccctacagcgatcccgtagtgacgtggatgttaacgca
gctgcggtcgctaagcaccgacacgttggacagaccagggtaacagggcgcctgccccct
ggctcctactcctcactggggaccaggtcagacaatggccgtgtacgtaccaagcagccc
ctgtccactgccagcagcgtgtccagccaggtggactcaagaggtcgaagccgcactaag
atggtctcccagtcccaacctggcagtcgcagtggctctccgggtcgtgtgctgacgagt
acggccctgagcaccatgagctcagggacccaccgggtgctggctgggtccagcggggac
aaaaccagacgcagccgtatcccccgtagccagggctgctccagagactcttcccccacc
cgcctgtcagttgctccttccagcattagttccatctacaacggagcaagcaaaggagct
cggggcagtcgtatccctcggcccagtatgagtcagggctgcagcagagaggccagcagg
gagagcagccgcgacacgagccctgttcgctccttcacaccccttgcaacgcggagctac
tctcgctccaccggagctctccacacacctgacacttttggggctgcaggatcaagtttt
ggcatcagccagtccagtcgtctctcttcttcagtcagtgccatgaggatcctcaacaca
ggctcagacgtagaagaggctctggcagatgctctgaagaagccagcacggcggcgatac
gaaaactccagcatgtactctgacgatgacgccaacagcgatgcatccagcgcctgttcg
gagaggtcctacagctccaggaacggaggagccatccccacctacatgagacagacagaa
gacgtagctgaggtgctgaaccgctgtgccagtgccaactggtcagagaggaaggaaggg
cttttgggtctccaggcgctgctgaagaaccaacgcaccctcagtcgggtagagctgaag
aggctctgtgaaatcttcaccaggatgtttgcagaccctcacagtaagcgagattccggc
agagtgtacggcacggcagaatccggtataagctcagcctccttcaagagagtgttcagt
atgttcctggagacactggtagatttcatccacgtccataaggaagatctgcaggactgg
ttgttcgtcctactcacacagctcctgaagaagatgggagctgacctgctgggctccgta
caggccaaagttcagagagccctggatgtcacacgagagtctttccccaatgaccttcag
ttcactattctcatgaggtttactgtggaccagacacagacacccaacctcaaggtgaaa
gtggccattttgaagtatatcgacaccctgacgttacagatggaagctccagactttgtg
aactccagtgagactcggctcgccatctcccgcatcatcacctggacgactgaacccaag
agctctgacgtcagaaaggcggcccagtcggtgttaatctcactgttccagctcaacact
ccagagttcactatgctgctggcagctctgcccaaaaccttccaggacggagccaccagg
ctgcttcaaaaccatctgaagaacactggcaacgctgcacaggcaccaatgggcagccct
ctgacacgccacaccccccgatctccagcaagctggtccagcccggtcacatcccccacc
aacacttcccagaacaccccctcaccaagtgcatttgactacgacacagagaacatgaac
tcagaggacatctacagctcactgaaaggtgtcactgaggcgatccagaactttagcgtc
cgcagccaagaggacatgaatgaaccggtccaccggcgggagggagaggagggggacagc
gggacagacggcagactgtcagactttgtggatggaggccgcatggctctggacaacaag
acgtctctcctcaacacccccctgctctcctccagcccccgaggggcccgcgagcacttc
tcagactctcccttcaaacacagccgcaaagacaccagcatggacgactctgagcatctc
actcatgacagcagcctggaccaatcggagctagtggccgagttgctgaaagaactgtct
aatcacaacgagcgcattgaggagaggaagacagcgctgcgcgacctgctgaagctgatt
cgcgagaacaccctgcaggtgtgggacgaacatttcaagaccatcctgctgctcctgcta
gaaacaatgggagacagagagcatgtgatccgaacgctagctctgcgggtgctgagagag
attctcagcaagcagccatggaggttcaaaaactacgcagagctcaccatcatgaaggcc
ctggaggctcacaaagacccccacaaggaggtggtacgagcagcagaggagacggcagcc
atgttggccttgtccatcagtccagaccagtgtgtcaaggtgttgtgtcccattatccag
tcagccgactaccccatcgacctggctgccatcaagatgcagaccaaagtagtggagagg
gttccccgcgagggcctgatgagcctcttgcctgagatcgtaccaggactcatacagggt
tacgacaactctgagagcagtgtaaggaaagccagtgtgttctgcttggtggccatttat
gcagttatcggagaggacctcaaaccgcacctcaaccaactctccggcagcaagctgaag
ctgttgaatctgtacatcaagcgcgcccagtctggctcgagcggcagtgaacctccgtct
gagggcctatag
DBGET
integrated database retrieval system
