KEGG   Cyclopterus lumpus (lumpfish): 117738632
Entry
117738632         CDS       T09199                                 
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117738632 (samd1b)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     117738632 (samd1b)
SSDB
Motif
Pfam: SAMD1_SHD SAMD1_WH SAM_1 SAM_2
Other DBs
NCBI-GeneID: 117738632
NCBI-ProteinID: XP_034400509
LinkDB
Position
1:complement(9899416..9909022)
AA seq 651 aa
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGSGGAEAARERTKHDHLNNNGDSAHSFTDQEE
GEEDSEPSPDPHTQTPASTSDKKLEPASSPSSGNGRLICGATTGCAVGSGCKEEKASAPR
DKGLGQQGVGDCPSPGLGHTTNSHDGGDASGITPSSADAVPGEREPCLSRDVTQNKTSSG
SVCHLPQEQQRPKQAVPLKPKLRVGGGGTDTAGDHANSDLGDRLVASVRSLSEKNIRGGS
AAAATRGHMKPLGLKEILGYLSSQDRLSEQKLTRGKVKVVMEREVARGRLRRTRCGNITL
PLRGVVAAEEPMPKNASADRLAKSALQDEHTGEKSPSASLRENEPMETAREEEEEEEEEE
DPRSSDEEAGGLSPVAMTTEPELIEKPTEDVEVQTASEQESEGWAAGLTGMCRLDSLTKT
PHLPVQGASLSQCNSTHVEDKAVVSDQQHMEAQSQMQEDRINHTSSDFNNLESKAEVGVS
SCLLTPTASPRDSGMSEERGINGGGGCMKSEGASGGLVDWTVSDVVSYFTTAGFPEQAAA
FRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQKTHFEDDDC
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgtccgaacccaataagtaccgagagtggatcctggaaacaatcgactctctccgctcg
aggaaagcccgtccggatctggagaggatttgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagaactggaaaaactgattcaagagcagacggtgctcaaa
gttagctacaaggggtccatctcgtaccggaatgcggcgaaggtgcagcggaaaagcaga
aagaagagtgagtttacggccgctggcagcggcggcgcggaggcagcgagggagcggacc
aaacacgaccatctgaacaacaacggcgacagtgcgcacagcttcaccgaccaggaggag
ggcgaggaggactcggagcccagcccagacccccacactcaaacaccagcaagcaccagc
gacaagaagctggagcctgcctcaagcccgagtagcggaaacgggcgcctcatttgtggc
gcaacaacgggctgcgctgtcgggagcggctgcaaagaggagaaagcaagtgcaccgaga
gacaagggattaggacagcagggggtgggggactgcccgtcgcccggtctcggccacaca
acaaactcgcacgacggcggcgatgcgagcgggataacgccgagcagcgccgacgcggtt
cctggagaaagagagccgtgtttgtcaagagatgtcacccagaacaaaacttcctctggg
agcgtctgccacctcccgcaagagcagcagagaccgaagcaggcggtgcccctcaagccc
aaacttcgagtcggaggagggggcaccgacacagcgggggaccacgccaactccgacctg
ggcgacagactggtggcttctgttcgcagcctgtcggagaaaaacatccgagggggctcc
gccgccgcggcgacacgaggccacatgaagccgctcgggctgaaggagattctgggctat
ctgagcagccaggaccggctgtcggagcagaagctgacccggggcaaagtcaaagtggtc
atggagagagaggtggcgaggggcagactgcgcaggacacgctgcgggaacattactctt
cctctgaggggggtggtggcggcggaggagccgatgccgaagaatgcgtccgcggacaga
cttgcaaagagcgcactgcaggacgagcacaccggggaaaagtcgccctccgcttctctc
cgggagaatgagccgatggaaacagccagggaggaggaagaggaggaagaggaggaggag
gatccccggagttctgatgaggaggcgggaggactatccccggtagccatgacaaccgaa
ccagagctcattgagaaacccacagaagacgttgaggtccagaccgcgtcagagcaggag
agtgagggttgggctgctggtctcactgggatgtgcaggcttgattccctcaccaagacg
ccccacctacctgttcagggagcttccctgtcacaatgtaacagcacacacgtggaggac
aaagctgtcgtctctgatcagcaacacatggaggcacaaagccagatgcaggaggacaga
atcaaccacacctcctcagactttaacaacttggagtctaaagcggaagtcggcgtgtcg
tcctgcctgctcacgcccactgcgtctcccagagactccggcatgtctgaggaacgaggg
ataaacggaggaggagggtgtatgaagtcagagggggccagcgggggcctagtggactgg
acagtgtctgatgtggtcagttatttcacaacagcaggttttcctgaacaggctgctgcc
ttcaggacccaggaaatcgatggcaagtctcttctcctcatgcagcgcaacgatgttttg
actggcctgtcaatcagactcgggcccgccctcaagatctatgagcgtcatgtaaaggtt
ctgcagaaaacacactttgaggatgacgactgttaa

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