Cyclopterus lumpus (lumpfish): 117738632
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Entry
117738632 CDS
T09199
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117738632 (samd1b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117738632 (samd1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117738632
NCBI-ProteinID:
XP_034400509
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Position
1:complement(9899416..9909022)
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AA seq
651 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGSGGAEAARERTKHDHLNNNGDSAHSFTDQEE
GEEDSEPSPDPHTQTPASTSDKKLEPASSPSSGNGRLICGATTGCAVGSGCKEEKASAPR
DKGLGQQGVGDCPSPGLGHTTNSHDGGDASGITPSSADAVPGEREPCLSRDVTQNKTSSG
SVCHLPQEQQRPKQAVPLKPKLRVGGGGTDTAGDHANSDLGDRLVASVRSLSEKNIRGGS
AAAATRGHMKPLGLKEILGYLSSQDRLSEQKLTRGKVKVVMEREVARGRLRRTRCGNITL
PLRGVVAAEEPMPKNASADRLAKSALQDEHTGEKSPSASLRENEPMETAREEEEEEEEEE
DPRSSDEEAGGLSPVAMTTEPELIEKPTEDVEVQTASEQESEGWAAGLTGMCRLDSLTKT
PHLPVQGASLSQCNSTHVEDKAVVSDQQHMEAQSQMQEDRINHTSSDFNNLESKAEVGVS
SCLLTPTASPRDSGMSEERGINGGGGCMKSEGASGGLVDWTVSDVVSYFTTAGFPEQAAA
FRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQKTHFEDDDC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaataagtaccgagagtggatcctggaaacaatcgactctctccgctcg
aggaaagcccgtccggatctggagaggatttgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagaactggaaaaactgattcaagagcagacggtgctcaaa
gttagctacaaggggtccatctcgtaccggaatgcggcgaaggtgcagcggaaaagcaga
aagaagagtgagtttacggccgctggcagcggcggcgcggaggcagcgagggagcggacc
aaacacgaccatctgaacaacaacggcgacagtgcgcacagcttcaccgaccaggaggag
ggcgaggaggactcggagcccagcccagacccccacactcaaacaccagcaagcaccagc
gacaagaagctggagcctgcctcaagcccgagtagcggaaacgggcgcctcatttgtggc
gcaacaacgggctgcgctgtcgggagcggctgcaaagaggagaaagcaagtgcaccgaga
gacaagggattaggacagcagggggtgggggactgcccgtcgcccggtctcggccacaca
acaaactcgcacgacggcggcgatgcgagcgggataacgccgagcagcgccgacgcggtt
cctggagaaagagagccgtgtttgtcaagagatgtcacccagaacaaaacttcctctggg
agcgtctgccacctcccgcaagagcagcagagaccgaagcaggcggtgcccctcaagccc
aaacttcgagtcggaggagggggcaccgacacagcgggggaccacgccaactccgacctg
ggcgacagactggtggcttctgttcgcagcctgtcggagaaaaacatccgagggggctcc
gccgccgcggcgacacgaggccacatgaagccgctcgggctgaaggagattctgggctat
ctgagcagccaggaccggctgtcggagcagaagctgacccggggcaaagtcaaagtggtc
atggagagagaggtggcgaggggcagactgcgcaggacacgctgcgggaacattactctt
cctctgaggggggtggtggcggcggaggagccgatgccgaagaatgcgtccgcggacaga
cttgcaaagagcgcactgcaggacgagcacaccggggaaaagtcgccctccgcttctctc
cgggagaatgagccgatggaaacagccagggaggaggaagaggaggaagaggaggaggag
gatccccggagttctgatgaggaggcgggaggactatccccggtagccatgacaaccgaa
ccagagctcattgagaaacccacagaagacgttgaggtccagaccgcgtcagagcaggag
agtgagggttgggctgctggtctcactgggatgtgcaggcttgattccctcaccaagacg
ccccacctacctgttcagggagcttccctgtcacaatgtaacagcacacacgtggaggac
aaagctgtcgtctctgatcagcaacacatggaggcacaaagccagatgcaggaggacaga
atcaaccacacctcctcagactttaacaacttggagtctaaagcggaagtcggcgtgtcg
tcctgcctgctcacgcccactgcgtctcccagagactccggcatgtctgaggaacgaggg
ataaacggaggaggagggtgtatgaagtcagagggggccagcgggggcctagtggactgg
acagtgtctgatgtggtcagttatttcacaacagcaggttttcctgaacaggctgctgcc
ttcaggacccaggaaatcgatggcaagtctcttctcctcatgcagcgcaacgatgttttg
actggcctgtcaatcagactcgggcccgccctcaagatctatgagcgtcatgtaaaggtt
ctgcagaaaacacactttgaggatgacgactgttaa
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