Cyclopterus lumpus (lumpfish): 117738636
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Entry
117738636 CDS
T09199
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
clum03012
]
117738636 (abcf1)
Translation factors [BR:
clum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117738636 (abcf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_28
AAA_29
AAA
AAA_14
AAA_22
NACHT
ABC_tran_Xtn
AAA_16
AAA_24
AAA_18
AAA_5
RsgA_GTPase
AAA_19
MMR_HSR1
NB-ARC
cobW
ATP-synt_ab
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
117738636
NCBI-ProteinID:
XP_034400512
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All DBs
Position
11:611574..632074
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AA seq
787 aa
AA seq
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MPKKMKEEAVWVDEEAAAPAAAEKTVKKGKKDKKGKKSFFEELATDGTPEVEEVAVKGTQ
GKQKKKKDRRKGKSGNADDEDEDEDVMLKLKKLSVQASDEEDEPVIARSKGNKKNKGGNI
FAALSQGQSDEDEDTHLDEEDTPAKKRGKPAEQSHSKEDDEDEDDSDGGDMMMSAEDVIA
EQAKQQEDDPLANLSKKEKKKKKKQMEYERQVASIRAQNALEGDFSISQAETSSRQAMLE
NASDIKLEKFSISAHGKELFINADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPN
IDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEERQLQSRLEKGEDSVAERLEKVYEEL
RAIGAAAAEPKARRILAGLSFTPEMQNRPTKRFSGGWRMRVSLARALFMEPTLLMLDEPT
NHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDEVCTDIIHLDNEKLYYYRGNYLTFKKM
YVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKEALTRKQQKGKKKGSQEEESQDA
TELLKRPKEYTVKFTFPNPPPLSPPILGLHCVDFGYGGQKLLFKNVDFGIDMDSRICIVG
PNGVGKSTLLLLLTGKLNPTKGEMRKNHRLKVGFFNQQYADQLNMEETATEYLMRNFNLP
YQDGRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELSCRQPDVLILDEPTNNLDIESI
DALSEAINEYKGAVIIVSHDARLITETQCQMWVVEDSTANQIDGDFDDYKREVLESLGET
MVNKVNP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaaatgaaagaagaagcggtgtgggtggacgaggaggccgcggccccggca
gctgcagaaaagactgtgaaaaaggggaagaaagataaaaagggcaaaaagagtttcttt
gaggaactcgccacagatggcacacctgaagtagaagaggtggctgtgaaaggcacacaa
ggaaaacagaaaaagaaaaaagaccgacggaaaggaaaaagtggaaatgcagatgatgag
gatgaggatgaggatgtcatgcttaagctgaaaaagctttcagtgcaagcaagtgacgag
gaagatgagccagtcattgcccgcagcaaagggaacaagaagaataagggcggaaacatc
tttgctgctctcagccagggccagagtgatgaggatgaggacactcatttagacgaagaa
gatacaccagcaaaaaagagagggaaacctgctgaacaatcacacagtaaggaggatgat
gaggatgaggatgacagtgacggaggtgacatgatgatgagtgctgaggatgtcattgct
gagcaggccaagcagcaggaagacgacccgttagctaaccttagtaaaaaggaaaagaag
aagaaaaagaaacagatggagtacgagcgtcaggtggccagtatccgtgctcagaatgct
ttggaaggagatttctccatttctcaggctgagacgtcctccagacaggccatgctagaa
aacgcctctgatatcaagctggagaagttcagcatctctgctcatggcaaggagcttttc
atcaatgctgacctactcattgtggcaggaagacgatatggtttggttggaccaaatggc
aaaggaaagaccacactactgaaacacatagccaacagagctctcagcattccacccaac
attgatgtgctgctgtgtgaacaggaggtggtagctgacgacacaccggcagtgcaggca
gtcctgaaggcggacacccgccgcctgaagctcctggaggaggagaggcagctccagtct
cgtctggagaagggagaggacagtgtggctgagaggctggagaaggtctatgaagaactc
cgggctattggagctgcagcagctgaacccaaagccaggaggatcctggctggtctgtca
tttacccctgagatgcagaacagacccacaaagcggttctctggagggtggagaatgagg
gtatcccttgccagagctctgttcatggagcccactctgctgatgctggacgaacccacc
aaccacctggatctgaacgccgtcatctggctcaacaactaccttcaaggctggaagaag
actctccttatcgtttcccacgaccagagtttccttgacgaagtgtgtacagatatcatc
cacttggataacgagaagctctactattacagagggaactacttgaccttcaaaaagatg
tatgtgcagaagcagaaagaactgcagaaacagtatgacaagcaggagaagaaactgaag
gatctgaaggctggtggcaagtccaccaaacaggctgagaagcaaactaaggaggccctg
accagaaagcagcagaaaggcaagaagaagggaagtcaggaggaggagagccaggatgcc
accgagctgctgaagaggcctaaagagtacaccgtcaagttcacctttcccaacccacct
cctctctcaccacccatactagggctacactgtgttgactttggctacgggggtcagaag
cttctcttcaaaaacgtggactttggaatcgacatggactccaggatttgtatagtcgga
cccaatggtgttggaaagagtacccttctgctgctgctcactgggaaactaaatcctacg
aagggtgagatgaggaagaatcatcgcttgaaagtgggcttctttaaccagcagtatgct
gaccagctgaacatggaggagaccgccacagagtacctgatgaggaactttaaccttccc
tatcaggacggcaggaagtgcctgggacgttttggactggagagccacgcccacaccatt
cagatctccaaactgtccggtgggcagaaggccagagtagtgtttgctgagctgtcctgt
cgtcaacctgatgtgctgatcctggatgagcccaccaacaatttggacattgagtcaatc
gatgctttatcagaggccatcaatgaatataaaggagctgtgatcatcgtgagtcacgac
gcccggcttatcacagagactcagtgccagatgtgggtcgtggaggacagtacggcaaac
cagatcgatggagacttcgacgattataagcgggaggtgctggagtctctgggagaaacc
atggtcaacaaggtcaacccctga
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