KEGG   Cyclopterus lumpus (lumpfish): 117738640
Entry
117738640         CDS       T09199                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117738640 (tdp2b)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117738640 (tdp2b)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos UBA_8 Exo_endo_phos2 TAP_C
Other DBs
NCBI-GeneID: 117738640
NCBI-ProteinID: XP_034400523
Ensembl: ENSCLMG00005004019
UniProt: A0A8C2WQY2
LinkDB
Position
11:9920512..9923292
AA seq 362 aa
MASNVVSDSDKPSVSNVEQSRSRLCDEFAAITGTDSAAAQCYLAVNEWEMERALNSFFEA
DLEKVFDEDFPESETSPKAKRQKVEEKPPEGCIDLTADSPASTRKPSEEDDNKLSLISWN
VDGLDTDNLGERARGLCSYLVLYTPDVVFLQELIPPYVQYLKKRAVSYLIIEGGEEGYFT
GMMLKKTRVKFLESEIVPYPTTQMMRNLLVVQVTFKGQKLCLMTSHFESCKAQAEERMKQ
LRVVIQRMRESPEDVTVLFGGDTNLRDTEVAKVGLPCSVCDVWERLGKQEHCRYTWDTKA
NNNKNVPYVSRCRFDRVYLRPAAKDGVPCLAPDHLALVGLEKLDCGRFTSDHWGIYCSFS
AA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcttctaatgttgtatcagactcggacaaaccatcggtttctaatgtggaacaaagc
agaagtcgcctctgcgatgagtttgctgcaataacaggaaccgatagcgctgcggctcag
tgctacctggctgtaaacgagtgggagatggagagagctttaaactcattctttgaggct
gatttggagaaagtatttgatgaagattttccagagagtgagaccagtcccaaagcaaag
aggcaaaaagttgaggaaaaacctccagaaggctgtatagatttgactgctgacagtcca
gcctccacacgcaaaccctcagaagaagacgacaataaactgtcactaatctcctggaac
gtggatggactcgatacagacaaccttggagagcgtgcaagaggcctgtgctcctactta
gtcttatacactcctgacgtggtgttcctccaggagcttattccaccttacgtccagtac
ttgaagaaacgggctgtcagctacctaatcattgaaggtggcgaggagggttactttacc
gggatgatgctgaagaagacacgggtcaaatttttggagagcgagatagtaccttacccg
acaactcaaatgatgaggaatctgcttgtagttcaggtaacattcaaaggccagaagctg
tgtctgatgacatcccactttgagagctgcaaagcccaagcagaggaacggatgaaacag
ctgcgagtggtgattcagaggatgagagagtcacctgaggatgttactgtcctgtttgga
ggggacacaaacctgagggacactgaggttgccaaagtgggtctgccctgcagtgtctgc
gatgtgtgggaacgactgggaaagcaggagcactgccgctacacatgggacactaaagcc
aacaacaacaagaatgttccttacgtcagtcgctgccgctttgaccgggtctacctccgc
ccggctgccaaggacggcgtcccatgcctggcccctgaccacttggccctggtggggctg
gagaagctggactgtggacgcttcactagtgatcactggggaatctactgtagcttctct
gctgcgtag

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