Cyclopterus lumpus (lumpfish): 117738669
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Entry
117738669 CDS
T09199
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117738669 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
117738669
NCBI-ProteinID:
XP_034400565
Ensembl:
ENSCLMG00005014591
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All DBs
Position
11:complement(12412031..12422068)
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AA seq
433 aa
AA seq
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MRGTMSAAAVALLLATVVTILSRAHADRNVYPSAGVLFVHVLEREHFKGEFPPYPKSGDA
SSDPITFNTNLMGYPDRPGWLRYIQRTQHSDGVLYGSPTAMHVGKASVIEITAYNRRTFE
TARHNLVINIMATEEFPLPYQAEFYIRNMNVEEMLASEVLGDFLGAVKNIWQPERLNAIN
ITSALDRGGRVPLPINNLKEGVYVMVGADVPFSSCLREVESPHNQLRCSQEMEPAISCDK
KFRAQFHIDWCKISLVDIKKVVPVYITRPDPGTGILPEFGEYNPPSETLMGRNYFSDFLI
TLAVPSAVALVLFFILGYTMCCRREGVEKRNMQTPDIQLVHHGSIQKSSKELRSMSKNRE
ISWPLSTLPVFNPVSGEVVPPLHPDNYETTSMPLMQTQTNLQNQITIPQQRPSGDNYVMS
TFRRLEVGAAVCF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcaccatgtccgctgcggcggtcgcgctgctcctcgctacggtggtcaccatc
ttgtccagagcacatgcggatcgtaacgtctacccatctgcaggagtgctgttcgtccat
gttctggagagagagcacttcaaaggagagtttcctccctaccccaaatccggtgatgcc
agcagtgacccgatcactttcaacaccaacctgatgggctaccccgacaggccaggctgg
ctgcgctacatccagaggacccagcacagcgacggagtgctctatggctcccccactgca
atgcatgtcggcaaggcctctgtcatagagattactgcctataacagacgcactttcgag
acggcacggcacaatttggtcataaacatcatggccacagaagagttccctctgccctac
caggcggagttttacatcaggaacatgaacgtggaagagatgttggccagcgaggtgctg
ggagatttcctgggagctgtgaagaacatatggcagcctgagcgcctcaacgccataaac
atcacctcggcgctggaccgtggcggccgtgtgcccctgcccatcaacaacctcaaggaa
ggagtgtatgtgatggttggcgctgatgttcccttctcgtcgtgcctgcgagaggtggaa
agcccacataaccagctgcgctgcagtcaggaaatggagcccgccatcagctgcgacaag
aagttcagagctcagtttcacatcgattggtgcaagatctctctggttgacatcaaaaaa
gtggtcccggtgtacattacccgtcccgacccgggaaccgggatcctgcctgaatttggg
gaatacaaccccccttccgagactctgatgggccggaactacttttcagatttcctaatc
acactggctgttccctccgctgtggcactcgtcctcttcttcatcctcggctacactatg
tgctgccgacgggaaggggtggaaaaaagaaacatgcaaacaccagacatccagctggtt
caccacggctccatccagaagtccagcaaggagctgcggagcatgtctaagaaccgcgag
atctcctggcccctctccaccctgcccgtcttcaaccccgtcagcggcgaggtggtgccg
ccccttcacccagacaactacgagaccaccagcatgcccctcatgcagacacagacgaat
ctacaaaaccagattacgataccacagcaacggccatcaggagataattatgtcatgtca
acatttcgaaggctggaggtaggtgctgcagtctgtttttaa
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