Cyclopterus lumpus (lumpfish): 117738681
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Entry
117738681 CDS
T09199
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117738681 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117738681 (jarid2b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117738681 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
117738681 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
117738681
NCBI-ProteinID:
XP_034400590
LinkDB
All DBs
Position
11:9323846..9421989
Genome browser
AA seq
1467 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRSAQKRQLDGDGTPNANGSL
ANGQLNGSGLKGSHKEDGSLRSQGPGSREYCEDGPAKKRPRLQAQRKFAQSQPNSPSTTP
VKVAEPGSLNTALATVPSTSLSSLSSSSLFLSIQDLSRRKPKTEDFLTFLCLRGSSALPS
NMAYFGSSQEEDLEDDEEEVEVVRNGSGIHSQGGGSNSQVSAYSSCHSTPRKGKHPTRQP
LNGHVFNSHGKAGTRESPRPKAGAHGRDSPAPPLPPLPPPPPPLLRERRERAEAREHVRQ
QALASSRGSANGLPPRRAAEELRKQVSKVNGLTRAGSAQAVSGTKKSRDFRLPSKTVKKY
TATVSKGHVTYTKAKQRELGKKTKLSSSYKHNSAASATSSANNHNQHSQPAASNGLANSG
KAAAPAHHSNAKTRKQVLLSNGLHNVAAVARLNGRLNGQRYNTLAKEDGQRQCQQGECPG
REGLRYSKRRLEVVLNSVGTGVVEQKAKTTGIEAKKAKLQPTPLETRSSSKKAANQEKAA
TQTTTPTTPVSNGHESDTPPSPKHTPPVTPLPPPTPPPQQTPPPNTPAANAEPVNQRPKR
ASAGKLMLIRQAQQQQSRSHGRNSSSSSPSSGPNHPQNPSRANTTSDPQQTSTCSSNTSS
LLASTNNSGQLKPAAFRLADRDKEWEREKEMARQKEREQEKEWERQRSRPDGWAALGDAP
VFRPVPREFQDPLVYLDAVREPAEVAGMCRVVPPTDWRPECKLSEEMRFVTQVQRVHMLS
RRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDLKKWT
KLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLTLQAEVLQEKKNLESRRGPLE
GLSDSSAPSALVLPRYEPKNGLVGGIVGGATGNHRTNGVYHRLKELEAQVKAGRRRLFAQ
EKQDKEDRQHGEEQQQQQQQQQQEEDRGVLSDQHKCINKGKSVSLTNFFRIARNTMTMCF
NKEPGAAEVEEEYWRIVEQRDSHVAVHCGKVDTSTHGSGFPTGKSESFSKHGWNLTVLPN
NSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPFIDYLHTGADCIWYSVPAEEK
AKLDKVVHTLLQANGTPGLEMLEKNIMLSPEVLCHEGIKVYRTVQRSGQFVVCYPGAFVS
KVCCGYSVSETVHFATPHWMNLGYQAAKDLKCRRIAKPFSMEKLLYQIATAESKRDNGLL
LSTISALLKDLRNIEMRQRQELYKAGLLSSARYGTHDGSLGPGEGRKKPRGKWLALESSE
RRCQICQHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQV
CGRAMLKNGGGGGGGGGGGGGGGGGGVGGVGVVVVGGGVVVTAVGGDHGLSPSKASPAKR
GPRKRATVEVSLARLSSSHIPKAAAVS
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaaggcctaagaggaatatcattcaaaagaaatacgatgacagtgacggg
atcccgtggtcagaggagcgggttatgcgaaaggtgctttacctctccctcaaggagttt
aggagcgcacagaaacgacagctggatggtgatggaaccccaaacgccaatggttcacta
gccaatgggcagctgaacggctcggggttaaagggcagccacaaagaagatggatccctg
cgctctcagggccccgggagccgtgagtactgtgaggacggtcctgcaaagaaaagacct
cggctccaggcccagaggaagtttgcccagtcgcagcccaactcgcccagcactacgccc
gtcaaggtggccgaaccaggcagcctgaacaccgccctggccactgtgccctcaacgtcc
ctgtcatcgctctcctcttcatcccttttcttgtccattcaggacctgtccagacgcaag
cccaagacggaggactttctcaccttcctttgcctcagaggttcatcagccctgcccagc
aacatggcctacttcggaagctcccaggaggaggacctggaggacgatgaggaggaggtg
gaggtggtgaggaacggaagtgggatccactctcaaggtgggggaagcaacagccaggtg
tcggcctactcctcctgccactcgacaccccgcaagggcaagcaccccaccaggcagccg
ctcaacgggcatgttttcaacagccacggtaaggcagggaccagggagagtcccaggccc
aaggcgggagctcacggcagggattcgccagcccccccactgccacctctaccgcctcca
cctccgcccctactgagggagcgcagggagcgggcggaggcgcgggagcacgtgaggcag
caggccctggccagcagtagaggctcagccaacgggctgccaccgaggagagctgctgag
gagctacgcaaacaggtctctaaagtgaacgggctgacgcgggcgggctcggcacaagcg
gtcagtggtaccaagaagagccgcgacttccgactgccgtccaaaactgtgaagaagtac
acagccaccgtgtccaagggccacgtcacctacaccaaagccaaacagagagaactgggc
aagaaaaccaaactcagcagcagctacaaacacaacagcgccgcctcggcaacatcgtca
gcgaacaatcacaatcagcacagccagccagcagccagcaatgggctggctaactcagga
aaagcagcggcaccagcccaccacagcaatgcaaaaacccgcaaacaggtgctactatcc
aatgggctgcacaatgtggctgccgtcgcccgcctcaacggcaggctaaatgggcagcgg
tacaacaccctggccaaggaggacgggcagagacagtgccagcaaggggagtgcccaggt
cgagagggactgcgttactccaagcggcgtctggaggtggtcctcaattctgtggggacc
ggggttgtggagcaaaaagccaaaaccactggcattgaggccaagaaggccaagcttcaa
ccgacacctctggagacgcgcagcagcagcaagaaggcggccaatcaagagaaagctgcc
acacaaaccaccacccctaccactccagtttctaacggacatgaatcagacacaccccct
tctcccaaacacactccacccgttactccacttccacctcccactcctcctcctcaacaa
accccgcctcctaatacaccagcagccaatgcggagccggtgaaccagcgacccaagcgg
gcatcggccggcaagctgatgttgattcgacaagcacagcagcagcagagcaggtctcat
ggtcggaactcctcctcttcctccccctcatcaggcccgaatcacccacagaaccccagt
cgtgccaacactacctcagacccccaacaaacctctacgtgttcctccaacacctcctct
ctgcttgcttccaccaacaactccgggcagctcaaaccagcagcttttcgccttgctgac
cgagacaaggagtgggagcgtgagaaagagatggcacgccagaaggagcgcgagcaagag
aaggagtgggagcgccagcggagcaggccagatgggtgggcagctctgggtgacgccccg
gtcttccggccggttccgcgggagttccaggaccccctggtgtacttggatgcggtgagg
gaaccggccgaggtggctggaatgtgtcgcgtggtcccaccaacagactggaggccagag
tgcaagctgagcgaggagatgcgttttgttacacaggtgcagagggtccacatgctgagc
cggcgctggggccccaacgtgcagcggctagcctgcattcgcaagcacctcaaatctcag
ggcattaccatggatgagccacctgtcattggtggctgtgaagtggacctgtcacgtttt
ttccagctcatcaatgacatgggcggcatgcagcaggtgatggatctgaagaagtggacc
aagctagccgaccttctgcgcatccctaagtcagcgcaggaccggctggccaagctgcag
gaggcgtatctccagtacatcctctcctatgactcgctgagcgctgaggagcgcctgacg
ctgcaggccgaagtgctgcaggagaaaaagaatctggagtcgcgccggggccctctggag
ggcctctcggactcctcagcacctagtgcactggtgctgccacgctatgagcccaagaat
gggcttgtaggtggaatagtgggaggggcgacggggaaccaccgcaccaatggagtgtat
catcgtctgaaggagctcgaggctcaggtcaaagcgggccggcgccggctcttcgctcag
gaaaaacaagacaaagaggacaggcagcatggagaggagcagcagcagcagcagcagcag
cagcagcaggaggaggacaggggcgttctcagtgaccagcacaaatgtattaacaagggg
aaatcggtgtctttgactaacttcttcaggatagcccggaacaccatgaccatgtgcttt
aacaaggaaccaggggctgctgaggttgaggaagagtactggaggattgtggagcagaga
gacagccatgtggcagtgcattgtgggaaggtggacactagcacacatggcagtggattc
cctacaggaaagtcagagtcattttcaaaacatggatggaacctcactgtccttcccaat
aactctggatctattctgaggcatctgggtgctgtgcctggggtgaccattccctggctt
aacattggcatggtcttttctacctcatgctggtctcgagaccaaaatcgccttccattt
attgattacttacacactggtgctgattgcatttggtattctgtccctgctgaggagaag
gctaagctggacaaggtggtccatacactgcttcaggccaatggcaccccaggactagaa
atgctggagaagaacatcatgctctctccagaggtgctgtgccacgaaggcatcaaggtt
taccggacggtccagcggagtggccagtttgtggtctgctaccccggtgcctttgtctct
aaagtgtgctgtggctacagcgtgtcagagacggtgcactttgccacgccgcactggatg
aacctgggttaccaggccgcaaaggacctgaaatgtcgtcgtatagccaaacccttttcc
atggagaagctactgtaccagatcgctacagccgagtccaagagggacaatggcctcctc
ctctccaccatctccgctctactcaaagacctcaggaacatagagatgcgccaacgacag
gaactttacaaggcaggtttgctctcctcagcccgctacggcacccacgacggcagcctg
ggccccggggaaggacgcaagaagccccgtgggaaatggctggcactcgagtcctcagag
agacgctgccagatctgtcagcatctctgctacctgtccatggtggttcaggagactgac
aatgtggtcttctgtctggagtgtgccctgcgttatgtggagaagcacaagtcttgcaga
ggcctgaagatgatgtaccgatacgatgaggagcaaatcaacagtttggtgaaccaggtg
tgtggccgggccatgttaaagaacggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggcggcggcgttggcggcgttggcgttgttgttgttggtggtggagttgtt
gtcactgcagtagggggggaccatggcctcagcccttccaaagcatcgccagccaagcga
ggaccccgaaagcgcgcaaccgtggaggtgtccctggcacgcctgtcctccagccacata
cccaaggctgctgctgtgtcctga
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