KEGG   Cyclopterus lumpus (lumpfish): 117738687
Entry
117738687         CDS       T09199                                 
Symbol
polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03020  RNA polymerase
clum03420  Nucleotide excision repair
clum04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117738687 (polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117738687 (polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117738687 (polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117738687 (polr2k)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117738687 (polr2k)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117738687 (polr2k)
  RNA polymerase III system
   RNA polymerase III
     117738687 (polr2k)
  RNA polymerase I system
   RNA polymerase I
     117738687 (polr2k)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117738687 (polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB DmmA-like_C DUF5816 Cytochrome_C7 HypA DZR Zn_ribbon_13
Other DBs
NCBI-GeneID: 117738687
NCBI-ProteinID: XP_034400597
Ensembl: ENSCLMG00005002367
UniProt: A0A8C2WLR8
LinkDB
Position
11:complement(9155191..9157068)
AA seq 58 aa
MDPQKDVQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggatccacaaaaagatgtgcaaccgcccaaacaacagcctatgatctacatatgtgga
gaatgtcacacagaaaatgaaattaaggcccgtgatccaatccgatgcagagagtgtggt
tacaggatcatgtacaagaagagaaccaagagattggttgtctttgatgcccgatga

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