Cyclopterus lumpus (lumpfish): 117738692
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Entry
117738692 CDS
T09199
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
117738692
NCBI-ProteinID:
XP_034400613
Ensembl:
ENSCLMG00005019565
UniProt:
A0A8C3AI75
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Position
11:11014136..11036367
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AA seq
1180 aa
AA seq
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MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQIPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRQGQGFHGGSEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEGKRDKPKATFEGE
KLKELTEVEADVINDVINPNGLPVQNGLDVDVKEFGRPQGHMPVPGPEGDLLGGPGGVGV
DGMTPMGGGGGPKPPEDFSGVEQGGVSMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYA
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAAPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQVANQGQQNQQQVMRA
GGNQRPLTPSQGQQGQQNDQMVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGARSGPVRLMAPGSVIISPSAAQAVAAAAASASGANGGLGGGANGSFRAMTSQQPQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQQASSSLGATLGAT
LGGFGTAGRTTPFPRSLLLESYQSVANSSGGSGSRRDSLTGNSELYKRTPSSLTPIGHGG
FYNGTLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAP
GAEAKYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRD
IAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEF
GSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVK
DQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPIL
EELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV
THASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRP
HISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaacagggcagatacctcaagccacaccccccagccagcagggtgtggcgggtgctgga
cgttcccaggatgatgccatggtagactacttcttccagcggcagcacggtgaacaacct
ggcaaacatcgctggcccactggagacaacatccatgacagccaggtgcgatccatggac
gagctgaaccatgactttcaggctctggctctggagggccgcgccatgggagagcagctg
ctaactggtaagaagttctgggagacggatgactctgggaaggacggaccaaaagggatc
tttctggaccagtggagggacagtgcatggggtgcctcagatcactccgtgtctcagcca
atcatggtgtcccgtcggcaagggcaaggttttcatggcggtagtgaagtcggggtgggc
tcggtgatgtcaccgcgctctgagagtggagggctgggagttagcatggtggagtatgtc
ctctcctcctcgcccgctgacaaactggattcctgcctccgaaaaggaccttatggacag
agggatggagaggtggaggaggggaagagggataagccaaaggcaacatttgaaggagag
aaactgaaagagttgacagaagttgaagctgatgtaatcaacgatgtcatcaaccccaat
gggctgcccgtgcagaacggccttgatgtcgatgtcaaagagtttggacgtccccaaggc
cacatgccggtccctggtcctgagggtgacctgcttggaggtcccggaggtgtaggggtt
gatggcatgacacccatgggaggtggtggaggccccaaacctcctgaagacttctctggc
gtggaacaaggtggtgtctctatggaccccatggagtctgtgatggagccgcttcagttt
gactacaactcccagatgcccatggactcagcacccaccgtgggcttatttgattacgcc
aaccagcagcagctgtttcagagaaacaacgccctagcagtgcagcagttaacagcagcc
cagcaacagcagtacgccttggcagcagcacagcagtctcacattggtctggccccagca
tttgtgcccaatccttacatcatcagtgctgctccaccagggaccgacccctacgcagct
ggactagcagcagccgctacactcggtccggcagtgatgcctccccagtactacggtgtg
accccctggggggtctaccctgccaaccttttccagcagcaggctgctgcagccaacaac
tcggccaatcagcaggtggccaaccagggccagcagaaccaacagcaggtgatgcgagcc
gggggcaaccaacgacctttgacccccagccagggtcagcagggtcagcagaatgaccag
atggttgcagcagcagcagtcaactcagcccttgcctttgggcagggattagcagcagga
gtcccgggctacccagtcctggctcctgcagcctactatgatcagacaggggcccttgtg
gtcaacactggagctcggagtggccctgtccgcctcatggccccaggctctgtcattata
tctccttccgcagcacaagcagttgcagcagcagcagcctccgcaagtggtgccaacggt
ggtctgggcggtggggccaacggttcctttcgtgccatgacgtcccagcagcctcagcag
cagggtggccccggtggggctctgggaggaagctccttttacggatcttcctccctcagc
tcctcctcccagagttcctcccttttctcacaaggctctggtcagccaggaccagggtct
gcctctttgggcttcagccagcaggcctcctcctccctcggtgccacactgggggccacg
cttggaggcttcggcactgcaggtaggactacacctttcccacggagtctactgctggag
tcttatcaaagcgtggccaactcaagtggtggcagcggttccaggcgggactccctgacg
ggcaacagtgagctgtacaaacgcacaccctccagcctcaccccgattggacatggaggc
ttctataatggcaccttgggttttagtccttcccctggtcctgtgggcatgcccctaccc
aaccagggcccctcccattccctcacacccccgccctccctatctaatcacagctcctcc
tccaacctgaatcttggaggcctgaccaatggcagtgggcgtttcatctctgcagctcca
ggagcagaggcaaagtaccgcagcgctgccagctcaggctcctccctcttttcgcccagc
agtcagctgttcccttcgtcacggctacgctacggcatgtctgacgtgatgccgtcaggc
cggagccgcctgctagaggacttcaggaacaaccgctaccccaacctgcagctcagagac
attgcaggtcacatcatggagttcagtcaggaccagcacggcagcaggtttatccagttg
aaattggaacgagccagttcagcggagcgccagctcgtcttcagtgagatattgcaggca
gcctaccagctaatggtggatgtctttggaaattacgtcatccagaagttctttgagttt
ggcagcctggaccagaagctggctctggcagagaggatccgaggtcatgtactgtctctg
gccctgcagatgtacggctgcagggtcattcagaaagctctggagtttatcccctctgat
cagcaggtcattagtgagatggttcgggagctggacggccatgttttgaagtgtgtgaag
gaccagaacggtaaccacgtggtgcagaaatgcatcgagtgcgttcagcctcatgcgctg
cacttcatcatagatgcctttaagggacaggtctttgccctctctactcacccttatggc
tgccgagtcattcagcgcattctcgaacactgccttcctgaacagacgctgcctatactg
gaggagctccatcaacacacggagcagctggtgcaggaccagtacggcaactatgtgatc
cagcacgttttggagcatggccgagctgaagataagagcaagatagtcgctgaaatcaga
ggcaatgtactgggactcagccagcacaagtttgccagtaatgtggtggagaagtgtgtg
acccatgcgtcacgggcagaacgggccgtgctgatagatgaggtgtgcagcctgactgag
ggcccccacagtgccttatacaccatgatgaaggaccagtacgccaactacgtggtgcag
aagatgatcgacgtggctgagcccactcagcgcaagatcgtaatgcacaagatccggcct
catatttccaccctgaggaagtacacgtatggaaaacacatcctggccaagctggagaaa
tactacatgaagaatggtgttgacctgggtcctctctgtggccctcccaatggcatcatg
taa
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