KEGG   Cyclopterus lumpus (lumpfish): 117738692
Entry
117738692         CDS       T09199                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
clum  Cyclopterus lumpus (lumpfish)
SSDB
Motif
Pfam: PUF PUF_NOP9 CFAP61_N
Other DBs
NCBI-GeneID: 117738692
NCBI-ProteinID: XP_034400613
Ensembl: ENSCLMG00005019565
UniProt: A0A8C3AI75
LinkDB
Position
11:11014136..11036367
AA seq 1180 aa
MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQIPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRQGQGFHGGSEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEGKRDKPKATFEGE
KLKELTEVEADVINDVINPNGLPVQNGLDVDVKEFGRPQGHMPVPGPEGDLLGGPGGVGV
DGMTPMGGGGGPKPPEDFSGVEQGGVSMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYA
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAAPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQVANQGQQNQQQVMRA
GGNQRPLTPSQGQQGQQNDQMVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGARSGPVRLMAPGSVIISPSAAQAVAAAAASASGANGGLGGGANGSFRAMTSQQPQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQQASSSLGATLGAT
LGGFGTAGRTTPFPRSLLLESYQSVANSSGGSGSRRDSLTGNSELYKRTPSSLTPIGHGG
FYNGTLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAP
GAEAKYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRD
IAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEF
GSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVK
DQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPIL
EELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV
THASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRP
HISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaacagggcagatacctcaagccacaccccccagccagcagggtgtggcgggtgctgga
cgttcccaggatgatgccatggtagactacttcttccagcggcagcacggtgaacaacct
ggcaaacatcgctggcccactggagacaacatccatgacagccaggtgcgatccatggac
gagctgaaccatgactttcaggctctggctctggagggccgcgccatgggagagcagctg
ctaactggtaagaagttctgggagacggatgactctgggaaggacggaccaaaagggatc
tttctggaccagtggagggacagtgcatggggtgcctcagatcactccgtgtctcagcca
atcatggtgtcccgtcggcaagggcaaggttttcatggcggtagtgaagtcggggtgggc
tcggtgatgtcaccgcgctctgagagtggagggctgggagttagcatggtggagtatgtc
ctctcctcctcgcccgctgacaaactggattcctgcctccgaaaaggaccttatggacag
agggatggagaggtggaggaggggaagagggataagccaaaggcaacatttgaaggagag
aaactgaaagagttgacagaagttgaagctgatgtaatcaacgatgtcatcaaccccaat
gggctgcccgtgcagaacggccttgatgtcgatgtcaaagagtttggacgtccccaaggc
cacatgccggtccctggtcctgagggtgacctgcttggaggtcccggaggtgtaggggtt
gatggcatgacacccatgggaggtggtggaggccccaaacctcctgaagacttctctggc
gtggaacaaggtggtgtctctatggaccccatggagtctgtgatggagccgcttcagttt
gactacaactcccagatgcccatggactcagcacccaccgtgggcttatttgattacgcc
aaccagcagcagctgtttcagagaaacaacgccctagcagtgcagcagttaacagcagcc
cagcaacagcagtacgccttggcagcagcacagcagtctcacattggtctggccccagca
tttgtgcccaatccttacatcatcagtgctgctccaccagggaccgacccctacgcagct
ggactagcagcagccgctacactcggtccggcagtgatgcctccccagtactacggtgtg
accccctggggggtctaccctgccaaccttttccagcagcaggctgctgcagccaacaac
tcggccaatcagcaggtggccaaccagggccagcagaaccaacagcaggtgatgcgagcc
gggggcaaccaacgacctttgacccccagccagggtcagcagggtcagcagaatgaccag
atggttgcagcagcagcagtcaactcagcccttgcctttgggcagggattagcagcagga
gtcccgggctacccagtcctggctcctgcagcctactatgatcagacaggggcccttgtg
gtcaacactggagctcggagtggccctgtccgcctcatggccccaggctctgtcattata
tctccttccgcagcacaagcagttgcagcagcagcagcctccgcaagtggtgccaacggt
ggtctgggcggtggggccaacggttcctttcgtgccatgacgtcccagcagcctcagcag
cagggtggccccggtggggctctgggaggaagctccttttacggatcttcctccctcagc
tcctcctcccagagttcctcccttttctcacaaggctctggtcagccaggaccagggtct
gcctctttgggcttcagccagcaggcctcctcctccctcggtgccacactgggggccacg
cttggaggcttcggcactgcaggtaggactacacctttcccacggagtctactgctggag
tcttatcaaagcgtggccaactcaagtggtggcagcggttccaggcgggactccctgacg
ggcaacagtgagctgtacaaacgcacaccctccagcctcaccccgattggacatggaggc
ttctataatggcaccttgggttttagtccttcccctggtcctgtgggcatgcccctaccc
aaccagggcccctcccattccctcacacccccgccctccctatctaatcacagctcctcc
tccaacctgaatcttggaggcctgaccaatggcagtgggcgtttcatctctgcagctcca
ggagcagaggcaaagtaccgcagcgctgccagctcaggctcctccctcttttcgcccagc
agtcagctgttcccttcgtcacggctacgctacggcatgtctgacgtgatgccgtcaggc
cggagccgcctgctagaggacttcaggaacaaccgctaccccaacctgcagctcagagac
attgcaggtcacatcatggagttcagtcaggaccagcacggcagcaggtttatccagttg
aaattggaacgagccagttcagcggagcgccagctcgtcttcagtgagatattgcaggca
gcctaccagctaatggtggatgtctttggaaattacgtcatccagaagttctttgagttt
ggcagcctggaccagaagctggctctggcagagaggatccgaggtcatgtactgtctctg
gccctgcagatgtacggctgcagggtcattcagaaagctctggagtttatcccctctgat
cagcaggtcattagtgagatggttcgggagctggacggccatgttttgaagtgtgtgaag
gaccagaacggtaaccacgtggtgcagaaatgcatcgagtgcgttcagcctcatgcgctg
cacttcatcatagatgcctttaagggacaggtctttgccctctctactcacccttatggc
tgccgagtcattcagcgcattctcgaacactgccttcctgaacagacgctgcctatactg
gaggagctccatcaacacacggagcagctggtgcaggaccagtacggcaactatgtgatc
cagcacgttttggagcatggccgagctgaagataagagcaagatagtcgctgaaatcaga
ggcaatgtactgggactcagccagcacaagtttgccagtaatgtggtggagaagtgtgtg
acccatgcgtcacgggcagaacgggccgtgctgatagatgaggtgtgcagcctgactgag
ggcccccacagtgccttatacaccatgatgaaggaccagtacgccaactacgtggtgcag
aagatgatcgacgtggctgagcccactcagcgcaagatcgtaatgcacaagatccggcct
catatttccaccctgaggaagtacacgtatggaaaacacatcctggccaagctggagaaa
tactacatgaagaatggtgttgacctgggtcctctctgtggccctcccaatggcatcatg
taa

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