Cyclopterus lumpus (lumpfish): 117738693
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Entry
117738693 CDS
T09199
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117738693 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117738693 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clum00535
]
117738693 (sdc3)
Proteoglycans [BR:
clum00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117738693 (sdc3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
117738693
NCBI-ProteinID:
XP_034400617
Ensembl:
ENSCLMG00005019981
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All DBs
Position
11:11038416..11071922
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AA seq
455 aa
AA seq
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MKLPWLLALTALLAHTATGQTWSPSIDDEGSTRDEFYDDEDLYSGSGSGFPGISVRPTSA
GVSFTTEEPLLLSTTQANGPAPSASPAAEPSPNPEDPIITPMPTEADGESGTFWEKESEL
EKERERELEMEREKEQEQERQRELENEREREKQLERERERERERERVREMEREKEKERER
EREREREREREKERERQKERELEREKELERIRVAAQTTAAPRSPAAIPVVTTNPATSPAE
STTPSAGSDDLSTTEEEEDVYLSPEPSAFFPGFDMETTTEDDMSTTAETTPEPTTAAPAT
TTVKTRFPFRPRVPMTTGTQAVPTEGTSRPQQPTTTQEGNNEAGAAGPSGDFEIRDDHRN
DLGRGIMPVDPDLIGNTVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLL
VYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctgctggcgctcacggcgctgctcgcgcacaccgccacgggacag
acttggtccccatctatcgatgatgaaggctcgacgagagacgagttctacgacgatgag
gatctctactcgggctccggctctggctttcctggcatcagtgtgaggccgacatcggca
ggtgtgtccttcactacagaagagcccctcctcctctccaccacgcaggccaatggcccc
gccccctccgcctcacctgcagctgagccgagccccaacccggaggaccctatcatcacc
ccgatgcccactgaagctgatggagagagtggtacattctgggaaaaagagagtgagctg
gagaaggagagagaaagagagttagagatggagagagagaaggagcaagagcaagagagg
cagagggaactggagaatgagagagagagggagaaacagttggagagggagagagagagg
gaacgagagagggagcgggtccgagagatggagagagagaaggagaaggagagagagcgc
gagcgagagagggaacgtgagagagagcgagagaaagagagagagaggcagaaagagcgt
gagcttgaaagagagaaagagctggagcgaatcagggtcgccgcccagaccaccgccgcc
ccacgatcgcctgcagccatcccagtggtgaccaccaacccggcaaccagcccagcagaa
agtacgacgccctctgccggttcggacgacctgagcaccacagaagaagaagaggatgtc
tacctgtcgcctgaaccctcagcttttttcccaggctttgacatggaaaccactacagaa
gatgacatgtccactacagcagagaccacccccgagccaacgacagctgcacccgccacc
accactgtcaagaccaggttccccttcaggcccagggttcccatgacgacaggcactcag
gcggtgccaacagagggaacgagccgtccacagcagcccacaactacacaggagggcaac
aacgaggcgggtgctgcaggaccgagtggagatttcgagatccgcgatgatcatcgtaat
gatcttggtcgaggtataatgccagtggatcctgatctgatcggcaacacagtggacgga
ggaagctctgccgcccagctgccgcagaagaacatcctggagaggaaggaggtgttgata
gcggtgatagtgggaggagtagtgggcgccttgtttgcggccttcctagtgatgttgctg
gtgtacaggatgaagaagaaggacgagggaagctacacactagaggaacccaaacaggcc
accgtcacctaccagaaaccagacaagcaggaggagttttacgcataa
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