KEGG   Cyclopterus lumpus (lumpfish): 117738693
Entry
117738693         CDS       T09199                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117738693 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117738693 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:clum00535]
    117738693 (sdc3)
Proteoglycans [BR:clum00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   117738693 (sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 117738693
NCBI-ProteinID: XP_034400617
Ensembl: ENSCLMG00005019981
LinkDB
Position
11:11038416..11071922
AA seq 455 aa
MKLPWLLALTALLAHTATGQTWSPSIDDEGSTRDEFYDDEDLYSGSGSGFPGISVRPTSA
GVSFTTEEPLLLSTTQANGPAPSASPAAEPSPNPEDPIITPMPTEADGESGTFWEKESEL
EKERERELEMEREKEQEQERQRELENEREREKQLERERERERERERVREMEREKEKERER
EREREREREREKERERQKERELEREKELERIRVAAQTTAAPRSPAAIPVVTTNPATSPAE
STTPSAGSDDLSTTEEEEDVYLSPEPSAFFPGFDMETTTEDDMSTTAETTPEPTTAAPAT
TTVKTRFPFRPRVPMTTGTQAVPTEGTSRPQQPTTTQEGNNEAGAAGPSGDFEIRDDHRN
DLGRGIMPVDPDLIGNTVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLL
VYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaagctgccttggctgctggcgctcacggcgctgctcgcgcacaccgccacgggacag
acttggtccccatctatcgatgatgaaggctcgacgagagacgagttctacgacgatgag
gatctctactcgggctccggctctggctttcctggcatcagtgtgaggccgacatcggca
ggtgtgtccttcactacagaagagcccctcctcctctccaccacgcaggccaatggcccc
gccccctccgcctcacctgcagctgagccgagccccaacccggaggaccctatcatcacc
ccgatgcccactgaagctgatggagagagtggtacattctgggaaaaagagagtgagctg
gagaaggagagagaaagagagttagagatggagagagagaaggagcaagagcaagagagg
cagagggaactggagaatgagagagagagggagaaacagttggagagggagagagagagg
gaacgagagagggagcgggtccgagagatggagagagagaaggagaaggagagagagcgc
gagcgagagagggaacgtgagagagagcgagagaaagagagagagaggcagaaagagcgt
gagcttgaaagagagaaagagctggagcgaatcagggtcgccgcccagaccaccgccgcc
ccacgatcgcctgcagccatcccagtggtgaccaccaacccggcaaccagcccagcagaa
agtacgacgccctctgccggttcggacgacctgagcaccacagaagaagaagaggatgtc
tacctgtcgcctgaaccctcagcttttttcccaggctttgacatggaaaccactacagaa
gatgacatgtccactacagcagagaccacccccgagccaacgacagctgcacccgccacc
accactgtcaagaccaggttccccttcaggcccagggttcccatgacgacaggcactcag
gcggtgccaacagagggaacgagccgtccacagcagcccacaactacacaggagggcaac
aacgaggcgggtgctgcaggaccgagtggagatttcgagatccgcgatgatcatcgtaat
gatcttggtcgaggtataatgccagtggatcctgatctgatcggcaacacagtggacgga
ggaagctctgccgcccagctgccgcagaagaacatcctggagaggaaggaggtgttgata
gcggtgatagtgggaggagtagtgggcgccttgtttgcggccttcctagtgatgttgctg
gtgtacaggatgaagaagaaggacgagggaagctacacactagaggaacccaaacaggcc
accgtcacctaccagaaaccagacaagcaggaggagttttacgcataa

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