Cyclopterus lumpus (lumpfish): 117738714
Help
Entry
117738714 CDS
T09199
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117738714 (srsf4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117738714 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117738714 (srsf4)
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
SR proteins
117738714 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117738714
NCBI-ProteinID:
XP_034400669
LinkDB
All DBs
Position
11:complement(4072021..4077783)
Genome browser
AA seq
444 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGSGGGGGGERGGGGGGGDRGDRGGGGDRGGGDRGGGSDRG
GGSGGGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHK
GRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRKRSYSRSRSHSRSRSR
SRRSRKSRSRSESSSRSRSRSRAASNSRSRSRSKKNKIKSKKEEEERSNGAPKNKERSRS
RSPKSRSPKSRSPKSRSPKSRSPKSKKIKKDEKKNKKDDSRSRSRSRSRSRSRSEIKDRS
RKSGSKGREQPKSDDEGGEVERGSRSRSHSPAESKSRARSKSKSKSRSPTPAKARSRSAS
RSESRSKSRSKSRSQSRSRSRSRS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtgtacatcggaagactgagctacagggccagagaaaaggacgtggagaga
ttcttcaaaggctacgggaagatactcgaagtcgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccacgtgatgcagatgatgctgtgtatgacttgaacggcaaggagttg
tgtggggagagggtcattgtggagcacaccaagggaccccgtcgggatggaggttatggt
ggtagtggtggaggcggcggcggcgaaagaggaggaggaggcggcggcggcgatagagga
gacagaggaggaggaggcgacagaggaggtggcgacagaggaggtggaagcgatagagga
ggtggtagcggcggcggtggaagaagtggatatgggcgctggggaagagacagatatggt
ccacctataaggacagattatcggctcattgttgagaatctttccagccgctgcagctgg
caggacttgaaggactacatgaggcaggcaggggaagtgacttacgctgacacccataag
ggccggaggaacgagggggtgatcgagttcaggctctactctgacatgaagagggctctg
gagaagcttgatggcactgaggtgaacggcagaaagattcggctaattgaggaccgcccc
ggagcccgacgcaagcgctcttattctcgcagccgcagccattccaggtcccgctccagg
agccgcaggtctcgcaagagccgcagccgcagtgagagcagcagtcgcagccgctcccgc
tccagggcggcatccaactcccgcagccgatctcgtagcaagaagaacaagatcaagagc
aagaaagaggaggaagagcgcagcaacggcgctccgaagaacaaggagcggagcaggagt
cgcagccccaaaagtcgcagccccaaaagtcgcagccccaagagtcgcagccccaagagt
cgtagccccaaaagtaaaaagattaagaaagacgagaagaagaacaagaaggacgattcc
cggtccaggtctcgctctcgctccaggtcccgctctagatcggagattaaggatcgctcc
aggaaatccggctccaagggccgcgagcagcccaagagcgacgacgagggaggcgaggtc
gagcggggctcccgctctcgttcacactcccccgccgaatctaaatccagagccaggtct
aaatcaaagtccaaatcccgctcccccacccctgccaaagcccgctcccgctccgcctcg
cgctcagagtctcgctccaaatctcgctccaaatcccgctcccaatctcgttctcgctcc
cgttcccgctcgtag
DBGET
integrated database retrieval system
