Cyclopterus lumpus (lumpfish): 117738735
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Entry
117738735 CDS
T09199
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
clum03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117738735 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117738735 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117738735 (nup153)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117738735 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
117738735
NCBI-ProteinID:
XP_034400712
Ensembl:
ENSCLMG00005004053
LinkDB
All DBs
Position
11:10017299..10032109
Genome browser
AA seq
1501 aa
AA seq
DB search
MTAIRRRNTDRHSDEKAMAATGGGKIRSRRYHIASKPYAKNKQQQSGLISRVTDTVKSIV
PSWLQKYFKSEDAPEEGGSVLETDQNCQPPPPPNGSEEEGPSPLGCDSPEPSTSYTEPST
SRASLNFQDYVLSRPPLSRSHHHFPPLEASSPTLGASSSLFSQPSTSSAPGPFSTGFSLV
KEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTQSGPQPAQSSL
RKPSFNLSVFGTSNSSLNSTVLNSSQLGDSPYYPGKTMYGGAAAVRTSRARPGTPYQAPP
VRRQIKAKPAGAQPCGVTSALARRILQSLERMSSPLADARRIPAAASSPLSASMDGTNLD
VSHFQAKKKRMDSSLPPVQKLVVPVAALVSGNRSVSFRPTLTPGGVSRTLDRTPKETPTR
QSPQLPEVTPGPSRSTMISSGPAYPLSSTPAASSVSSGGGKMKRERTSTRPSSKRPEEEE
VAQVLDLPTISLPISSSALPTFSFSSPLPPLTTSTTNSTAPNLTHVTPAKETVTNKEPPT
ASTPPSVPFTFSSPIVKATASSPPSFSPSAGFTFSAPVAKLGPSMSNGKLAYPIVAAVKF
ATSKSTEDFEGPFKPAKALKQGSVLDLLKAPGFASPVAQTSPGPVGNLLQTSTLSTAPSS
ITITTSSSSSTRFGDVFKAPPGWGCDVCLVQNKPSDTKCVCCMAPQPSSAKSMDSKPSTA
TSVGRESSGKNTTTTTTAGFGIMFSNPAGTWDCDTCLVLNKPDAVKCVACETAKPGTGLK
PSLTLPSAFSAISPPTAPVSTGFIGFGDKFKKPADAWECDTCLVENKAEDTKCVACTSTK
PGASAGASSSASNAQVFGLAFKMPEGAWDCDVCLVQNKAADVQCVACQAVKPGAKVEPKA
FGSSAAVTSGSNSGNFKFGTSDSTSGNESVGFKFGGSLTESSSSSSSGGFKFGVPFGSSS
SETSSKDTTASTGFKFGNSSEGFKFGTASSDDKKSDQSAAGSGFKFGASGGILFGTGSSS
TESNSSKGGFTFGLSKPEEKTPDTTTNPSSRSCTPPAPSQEKSEVAASSNDTTSTSTTRS
VFGSLATTTPQGGSTFGTLQTDKEPAAPTFTFGKPEEKKEAATSSTPSAFLFGAASKETD
AAAPAAATSGGFSFSKPSAPTEQPPPAYNFGKPADKSETAEAPKPSFSFGQSAADSSTAP
KQAFSFMVGNPTNLVNSTTSSSTTPTPSLFGTTTSTSSSGNSSTQAPAPAAAPSTFMFGQ
TAATSNEAPPAKAFVFGQSQDSQPPAPSAAPLNSTPVPAQPFIFGAPASAAAAPASAAAA
PPTFGFGAAASTAASTTAPSAAPSPFAFSSAPSGGFGANQTSSFGSSFGSPFPSTPSQPP
AFGAKPNATPVFGQQTNSTPVFGTAANSAQAGGFQFGGASAFGATNNTSGGVFTFGAGSA
ASPGPPANPSIAPQSGPPGGGFTFSQPPPFNIGSAKSFTAPPAGPQAIAGRKIKTAVRRR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgatagacactcagacgaaaaagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcatatcgcctctaaaccttacgccaag
aataaacagcaacagtcaggcctcatcagtcgagtgacagacacagtaaagagcatcgtt
ccttcctggctgcagaaatacttcaagagtgaagatgctcctgaagaaggaggatctgta
ctggagacagaccagaactgccagccaccacctcctcctaatggcagcgaagaagaagga
ccttctccccttggatgcgactccccggagccaagcaccagttacacagagccctcaacc
agcagggcatccctaaactttcaggactatgtgctttctcgtcctccactgagtcgttcg
caccatcactttcctccgctggaggcctcctccccaaccctgggggcctccagcagcctt
ttctcccaaccctccacctcctctgcccctggacccttttccacaggcttctccttggtc
aaagaaatcaaggacaacctctcgcagcatgaagatgacaacatctcgaccactagcggc
ttctcctcacgagcctcagacaaagatgtccccacttccaaaacggcatcacttcctcaa
ctttggtccccagagatggacagaacacagtctgggcctcaacctgcccagtccagtctt
agaaagccttctttcaacctttctgtatttggaacttccaattcatcattaaacagcaca
gtactaaactccagccagctcggagattcaccctactatcctgggaagaccatgtatggt
ggggcagctgcagtcaggacctcccgtgctcgtcctggaaccccatatcaggccccccca
gtgaggagacagatcaaggccaagcctgctggtgctcaaccctgtggggtgaccagcgcc
ttagcgagacgcatccttcagtccttggagcgaatgtcgagccccctggctgatgctcgg
agaatcccagcagcagcctcgtcccccttgtcagcatcaatggatggcacaaatctagat
gtttcacatttccaagcaaaaaagaaacgtatggattcctccctcccaccggtgcagaag
ctggtggttcctgttgcagcgttggtgtcaggaaaccgttctgtgtcctttaggccaact
ttaactccaggaggagtgagcagaactcttgacaggaccccaaaagagacgcctacaaga
caatcaccacaactacctgaagtaaccccaggtccatctcgaagcacaatgatttccagt
ggcccagcctatcctctgtccagcacgcctgcagccagcagcgtgagctctggagggggc
aagatgaagagagagaggaccagtacacggccttcctctaaacgccctgaagaggaagag
gtggctcaagtactggacctaccaaccatttcacttcccatcagctcctctgccttgcct
accttcagcttctcctcccctcttccccctctcaccacctccaccaccaacagcacggct
cccaacctcacgcatgtgactcccgctaaggaaactgtcacaaataaggaaccaccaacg
gcctcgacacctccctctgtaccttttacattttcctcccctattgtcaaagcgactgct
tctagtcctccttctttttccccctcagctggattcacttttagtgcacctgtagcaaag
ttaggaccctccatgtctaatgggaagcttgcctatcccatagttgcagcagtgaagttt
gcaacaagcaaaagcactgaagattttgaagggcctttcaagccagccaaggccctgaag
cagggcagtgttttggatcttcttaaggcacctggctttgcttctcctgttgctcagact
tccccaggcccagtcggcaatctgctgcagacctccacactatccacagccccttcctcc
attaccatcaccacctcctcctcctcctcaacaagatttggcgatgtgttcaaagcccca
ccaggctggggctgtgatgtctgcttggtgcagaacaagccatcagacaccaaatgcgtt
tgctgtatggccccacagccgtcctcagccaaatctatggacagtaaaccttcaacggcc
acctcggttgggcgagagagcagcggcaagaacaccaccactacaactactgcaggtttt
ggcataatgttctccaacccggcaggaacttgggactgtgacacatgcctggttctaaac
aaacctgatgcagtaaagtgtgtggcctgtgaaacagccaaacctgggacagggcttaaa
ccctcactgactcttccgtctgccttctcagctatatccccacctacagcccctgtttct
acagggttcatcggatttggagacaagttcaaaaaacctgcggatgcatgggaatgtgat
acatgtttggtagaaaacaaggctgaggacacaaagtgtgtggcttgcaccagcactaaa
ccaggagcttcagcgggagcctcttcttcagccagcaatgctcaggtgtttgggttggcg
ttcaagatgccagaaggtgcctgggattgtgatgtctgtcttgtacagaataaggctgca
gatgtccagtgtgttgcctgtcaggcagtcaaacctggagctaaagtggagcccaaagct
tttggttcatcagctgccgtgacttcaggctctaattctggaaattttaagtttggtaca
tcagacagtacttcgggaaatgaatctgtaggtttcaagtttggaggctcattgacagaa
tcctcctcttcatcttcatcaggtggattcaaatttggagtcccatttggaagctcctca
tcagaaacctcttctaaagacactactgcctcaacggggttcaaatttggcaactcatct
gagggctttaaatttgggactgcctctagtgatgacaaaaagtcagaccaatctgctgca
ggttctgggtttaagtttggagcaagcggtgggatactatttggaactggctcatctagc
acagaaagtaactcctccaagggcggcttcacatttggactctcaaaaccagaggagaaa
acaccagacactaccaccaacccatcctctcgtagttgtactcctcctgcaccctctcag
gagaaaagtgaggttgctgcatcgtcaaatgacaccacatccacatccaccactaggtcg
gtatttgggagtttggcgaccaccacaccacaagggggctctacttttggaaccttacaa
acagacaaagagccagctgcgcccacgtttacttttggaaagccagaggaaaagaaggaa
gccgctacctcctcgactccatctgccttcctcttcggtgctgctagtaaagagacagat
gctgctgcaccagcagcggccacctcaggaggcttttcctttagcaagcccagtgctcca
acagaacaacctccacccgcctataattttggcaagccagcagacaagagtgaaactgca
gaggccccaaagccgtcttttagctttggacaaagtgctgcagattcttcaactgctcca
aaacaagcattttcctttatggttggcaatcctaccaacctagtcaactccaccacttcg
tcatccaccaccccgacgcccagtctgttcggcaccaccaccagcaccagcagcagcggc
aacagttccactcaagctcctgctcctgctgcagctcctagcactttcatgttcggtcaa
actgctgcaacatccaatgaagctccaccagctaaggcctttgtctttggccagagtcag
gacagccagccacctgccccgtcagctgcccctctgaactctactcccgttccagctcag
ccctttatctttggtgctcctgccagtgctgctgctgctcctgccagtgctgctgctgct
cctccaaccttcggctttggagcagcagcatccactgctgcctcaactacagctccatct
gcagctccctcaccatttgcattcagctcggccccctctggtggatttggggccaatcag
acttcttcattcggttcctcctttggatcccccttcccatccacaccgtcccagccccca
gccttcggagccaaacccaacgccacacctgtctttggacagcagaccaactccacacct
gtatttgggacagctgctaattctgcacaagctggaggctttcagtttggaggagccagt
gcattcggagccacaaacaacacctcaggaggagtgtttacttttggagcaggatcagca
gcttctcctggcccccctgcaaacccctctatcgcaccccagtcaggaccccctggaggt
ggatttactttttcacaacccccaccattcaatattgggtcagcgaaatccttcaccgcc
cctcctgctggaccgcaagcgattgctgggcgcaagatcaagacagcggtgcggcgcaga
aagtag
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integrated database retrieval system
