Cyclopterus lumpus (lumpfish): 117738765
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Entry
117738765 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel gamma-4 subunit-like
KO
K04873
voltage-dependent calcium channel gamma-8
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117738765
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117738765
04261 Adrenergic signaling in cardiomyocytes
117738765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117738765
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117738765
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CD20
AA_permease_2
DUF2269
Motif
Other DBs
NCBI-GeneID:
117738765
NCBI-ProteinID:
XP_034400767
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Position
11:19484957..19493706
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AA seq
455 aa
AA seq
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MEAKGRNMPPDISFLPRPAMVWCERGIQVLLTTMGAFAAFALMTVAIGTDYWLYARAFIC
NSTANSSQDDSNNKDKKDPGALTHSGLWRICCLEGLKRGVCSQINHFPDDADYDQDSAEY
LLRVVRASSIFPILSAILLLLGGVCVASSSFYKSKRNIVLGGGILFVAAGLSNIIGVIVY
ISAALSDISPKKDEDKKWHYSYGWSFYFGGLSFILAEMVGVLAVNIYIEKNKELRCRSRA
DLFKSTTHAVLRLPSYRFRRRSRSSSRSTDPPHSQEASPIGTSKTFSLPPSAPPFSVATL
PNPHHGSSGGSGGGGGGGDISMYTLTRDSKLGSLGGGAPPLYGTVDRATLYQLHNYFPKE
SSGGSGGGGSGGAVINSGTLPSHSKSNLAAAAVAVAQNAAPLNTSASAAVPAQPAPISTA
TMERDRGNMGTLDRLTAKRDRDSNSDTLNRKTTPV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaaaggcagaaacatgccgccagatatcagtttccttcctcgcccggcgatg
gtgtggtgcgagcggggcatccaggtgctgctgaccaccatgggggcgttcgcggccttc
gccctcatgacggtggccatcggcacggactactggctgtacgcccgcgccttcatctgc
aacagcacggccaactcgtcccaggacgactccaacaacaaggacaagaaggaccccggg
gcgctcacccactccggcctctggaggatctgctgcctggaaggcttgaagcgaggtgtg
tgttcccagatcaatcatttcccagacgacgcagactacgaccaagattctgcagagtat
ctgctgcgtgtggtccgagcctccagcatcttccccatcctcagcgccatcctgctcctg
ctgggcggcgtgtgcgtcgcctccagcagcttctacaagagcaagaggaacatagttctc
ggcggagggattctcttcgtggctgcgggcctcagtaacatcatcggggtaatcgtgtac
atctcggcggccctgagcgacatctcccccaagaaggacgaggacaagaagtggcactac
tcctacggctggtcattctacttcggcggcctgtccttcatcctggccgagatggtgggc
gtcctcgccgtcaacatctacatcgagaagaacaaggagctgcgctgccgttctcgcgcc
gacctcttcaagagcaccacgcacgccgtgctgcggctgcccagctaccgcttccggcga
cgctcgcgctccagctcgcgctccaccgacccgccgcactcgcaggaggcctcacccatc
ggcacgtccaagacctttagcctgccgccgtccgctccacccttctccgtggccaccctg
cccaacccgcaccacggcagcagcggcgggagcggcggaggaggaggaggtggcgacatc
tccatgtacaccctgacgagggactccaagctgggcagcctcggaggcggcgccccgcct
ctctacggcaccgtggaccgcgccacgctgtaccagctccacaactacttcccaaaggag
tccagcggcggcagcggaggaggaggaagcgggggagcggtgataaacagcggcacactc
ccatctcactccaagtccaacttggcggcggcggcggtggccgtagcccagaatgcagcg
ccgttgaatacctccgcgtcagccgccgtgcctgcccagccggctccgatatctacagcc
accatggagagggaccgggggaacatgggaaccctggaccgcctgacggccaaaagggac
cgggacagcaactcagatactctgaacaggaaaactacgccagtttaa
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