Cyclopterus lumpus (lumpfish): 117738783
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Entry
117738783 CDS
T09199
Symbol
khdrbs1b
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1b
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117738783 (khdrbs1b)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117738783 (khdrbs1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Qua1
Sam68-YY
KH-I_KHDC4-BBP
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
117738783
NCBI-ProteinID:
XP_034400801
Ensembl:
ENSCLMG00005007671
LinkDB
All DBs
Position
11:18569469..18574956
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AA seq
362 aa
AA seq
DB search
MENDDKYLPELLAEKDSLDASFTHAMKLLNAEVDRIQKGETKKEADPYLDLFTTKNIKLK
ERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKSKEEGLRKGGE
PKYAHLSMELHVFVEVFAPVPEAYLRMAHAMEEVKKFLFPDMMDDICQEQFMEMSYLNGG
QEHCTRGRGGPPVRGREAPPGGAHRGRGMPPRGAPARGGAARGGPPRGGALRGAPSCRGG
PPGAPARGASAPRARPPASGPPQRMAHPPHHQHTPAAAGDGYEDYGYDESYTDTAYESYD
SYYSQPQAEPEYYDYGHGESAESYESYDQDDWNGTQRTVSGKAPPPSRGAKTPYREHPYR
QY
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgacgacaaatatctgcccgagctgctggcggagaaggacagcctggacgcg
tcgtttacgcacgccatgaaacttttaaacgcagaagtcgatagaatccagaaaggcgag
accaagaaggaggcggacccgtacctggacctcttcaccaccaagaacatcaagctcaag
gagcgcgtgctcatacccgtcaaacagtaccccaagttcaatttcgtggggaagattttg
gggcctcagggcaacacaatcaaacgtctgcaggaggagaccggagccaagatctccgtg
ctgggcaaaggatccatgagagacaaatccaaggaggaggggctgaggaagggcggcgag
cccaagtacgcccacctgtccatggagctgcacgtgttcgtcgaggtgttcgcccccgtg
cccgaggcctacctgcgcatggcgcacgccatggaggaggtcaagaagttcctgtttcca
gatatgatggatgatatctgccaagagcagttcatggagatgagctacctgaacggaggc
caggagcactgcaccagaggccgagggggtcctccggtcaggggccgcgaagcgcctcct
ggtggagcacacagggggaggggcatgccgccccgtggcgcccccgccaggggaggcgcg
gcccgaggcggcccgcccagaggcggcgcgttgaggggcgcgccgtcgtgccgaggaggg
ccgccgggggcgcccgccaggggggcctcggcgccacgagcccggcccccggcgtccgga
cccccgcagaggatggcgcacccgccccaccaccagcacacccccgccgcggccggcgac
ggctacgaggactatggctacgatgagagctacacagacacagcctacgagtcatacgac
agctattacagtcagccacaggcagagccagaatactacgactacggacacggagagagc
gccgagtcctacgagtcctacgaccaggatgactggaacgggacccagcgaacagtttca
gggaaggccccgcccccctccagaggcgccaagacgccataccgggagcacccgtaccga
cagtactga
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