KEGG   Cyclopterus lumpus (lumpfish): 117738851
Entry
117738851         CDS       T09199                                 
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
  KO
K17925  sorting nexin-13
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:clum04990]
    117738851 (snx13)
Domain-containing proteins not elsewhere classified [BR:clum04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   117738851 (snx13)
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C NCH1
Other DBs
NCBI-GeneID: 117738851
NCBI-ProteinID: XP_034400859
Ensembl: ENSCLMG00005004809
LinkDB
Position
11:12040222..12062775
AA seq 966 aa
MSNVPQQRISSSQHTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEQSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKKRDITEELVDSFFEAEMEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQGQQTDGKKQSSATKGLLKAAALGVYEQYLSDKASPRVQVDEAPVTTL
GEKLQKDDPTPEIFDEIQKNVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDETMHLHAFISDTGVCNDHGKTYALYAITVFRR
SHDGSEDCWKTYRRYSDFHDFHMRVIEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLN
TYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNVSNAV
KGLPDSLAEGMTKVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSP
EQVADYVKKFRDSYWPNGILAETPPRRDKSIRMRTRIAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRVHRYGQKLK
SSSLKR
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgagtaacgtccctcaacagcgaatttcttcatcacaacatacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttccttgtcacctttggaccctttgcc
atattctacctggctttttatatattctgcttcattggagggggctttgcggtcactctg
ctttatggaaaaatcaactcagagaaacacctggaaaagtgcgagcaatcttacttgcca
cccacacaaattggtatactgaagacattggatgagatgaagctggagatgaagcccatc
aaaattgacagaagactgactggatccagtttcattgatgaaccactacaacaggtgatc
cagtttgctctgagagattatatccagtactggtactacactctgagcgaggatgagtcc
ttcttattggagatcagacagacgctgcagaatgccctcgtccagttctctacacggtcc
aaagaggtggactggcagccttactttaccactcgcctggtggatgactttgccacccat
ttgcgtgtctttagaaaagcccaggatcgcctcgctgacagagaggacaagaaaagggac
ataacggaggagctggtggactccttctttgaggccgagatggagatggaaagaaagatt
tgtcgagacgtagtatgcacttcacacaaagatgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctcagggaggtgctggcgcgtggtgtgctacttcctctgattaaccagcttagcgac
ccggactacatcaaccagtttgtcatctggatgatccgggactccagctgtaactatgaa
gccttcatgaacatcctgaagctcacagacaagcctgctgagctggaggctgtcaaggac
aaggtgctagaggagctgcagtacctccgctctctggacactgccggagatgatatcaat
gtgatcaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgagaccaggatc
cagagactacactctggcaaggaggtggatgccttgaagctggcagccaactttggcaag
ctgtgtgttatcccactggatcacatcctcatccacaacatagccctgcagttcttcatg
gacttcatgcaggcagctggggcccaggcagagctcttcttctggctcactgtggagggc
tacagggtgacggcgcagcagcagctggaggccatgcagggccaacagacagatggcaag
aagcagtccagcgccaccaaggggctgctgaaggccgctgcactgggtgtctacgaacaa
tacctctcagacaaggcgtcgcccagggtgcaggtggacgaagcacccgtcacaacacta
ggggagaagctacagaaagacgaccccacgccagagatatttgatgaaatccagaaaaat
gtgtatgacatgatgctacgtgatgagcgctactacccctccttcaagcagagtcctctc
tatgtccgcatgctagcagagttagacatgttgaaagagccgagctaccggggttctgat
gacggcgacggagaatccttcaatggctctccaacaggaagcataaacctatctttagac
gacttgtccaactcctgccatgatgaaactatgcacctccatgccttcatctctgacaca
ggggtgtgcaacgaccacggtaagacctacgcactgtacgccatcaccgtgttcagacgc
agccatgacggcagtgaggactgctggaagacctatcgccgctactctgacttccacgac
ttccatatgagggtcattgaacagtttgagaacttggcgtcgatcctcaagctgccaggg
aagaagactttcaacaacatggacagagacttcttggagaaaagaaaaaaagacctcaat
acgtacctacagttgctgctcaacccagagatggtgaaggcctgtccaacgctgattcct
tatgtatatgacttcctagagaacaaggcctacagcaagggcaagggagagtttgcacgc
aagatagacacatttgtaaatcctctgaggagttcgatgagaaatgtgtcaaacgcggtg
aaagggctgccagacagtctggctgaaggcatgaccaaggtctctgacaacatgggccgc
atgtcagaaagactgggtcaggacatcaaacagtccatactcaaggtgcctccactcctc
ccaaagtctgacatcgaccctgaacactgtcgggtttctgctcagcttgatgacaacgtg
gatgataacatcccgctaagggtaatgctgcttctcatggacgaagtatttgacctcaag
gagaaaaaccagtggctgcgcaggaacataaagaacctgctgcagcagctcattcgggcc
acgtacggagacaccatcaacaggaaaattgtggaccatgtggactacttgacctcacct
gagcaggttgcagactacgtcaagaagttcagggattcctactggcccaacggaattctg
gctgagacgccaccccgtcgggacaagagcatccgcatgaggacacgaatagctgccaag
accagtctgttgggcatcatgccagacgagctgaagcacatcatcggagcggacaccacg
agaaaaggcattctccgtgttttcgacatgtttcagtaccaacccatgaaccgtcggcta
gtctacgttttcctggagggcttcttggagacgatgttcccccagtacaaattccccgag
ctctttgtcaagttgcactcccgctcgccacgcgtccacagatatggccagaaactcaaa
tcctcctccctcaagaggtga

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