Cyclopterus lumpus (lumpfish): 117738851
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Entry
117738851 CDS
T09199
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117738851 (snx13)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117738851 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
117738851
NCBI-ProteinID:
XP_034400859
Ensembl:
ENSCLMG00005004809
LinkDB
All DBs
Position
11:12040222..12062775
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AA seq
966 aa
AA seq
DB search
MSNVPQQRISSSQHTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEQSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKKRDITEELVDSFFEAEMEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQGQQTDGKKQSSATKGLLKAAALGVYEQYLSDKASPRVQVDEAPVTTL
GEKLQKDDPTPEIFDEIQKNVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDETMHLHAFISDTGVCNDHGKTYALYAITVFRR
SHDGSEDCWKTYRRYSDFHDFHMRVIEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLN
TYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNVSNAV
KGLPDSLAEGMTKVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSP
EQVADYVKKFRDSYWPNGILAETPPRRDKSIRMRTRIAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRVHRYGQKLK
SSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacagcgaatttcttcatcacaacatacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttccttgtcacctttggaccctttgcc
atattctacctggctttttatatattctgcttcattggagggggctttgcggtcactctg
ctttatggaaaaatcaactcagagaaacacctggaaaagtgcgagcaatcttacttgcca
cccacacaaattggtatactgaagacattggatgagatgaagctggagatgaagcccatc
aaaattgacagaagactgactggatccagtttcattgatgaaccactacaacaggtgatc
cagtttgctctgagagattatatccagtactggtactacactctgagcgaggatgagtcc
ttcttattggagatcagacagacgctgcagaatgccctcgtccagttctctacacggtcc
aaagaggtggactggcagccttactttaccactcgcctggtggatgactttgccacccat
ttgcgtgtctttagaaaagcccaggatcgcctcgctgacagagaggacaagaaaagggac
ataacggaggagctggtggactccttctttgaggccgagatggagatggaaagaaagatt
tgtcgagacgtagtatgcacttcacacaaagatgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctcagggaggtgctggcgcgtggtgtgctacttcctctgattaaccagcttagcgac
ccggactacatcaaccagtttgtcatctggatgatccgggactccagctgtaactatgaa
gccttcatgaacatcctgaagctcacagacaagcctgctgagctggaggctgtcaaggac
aaggtgctagaggagctgcagtacctccgctctctggacactgccggagatgatatcaat
gtgatcaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgagaccaggatc
cagagactacactctggcaaggaggtggatgccttgaagctggcagccaactttggcaag
ctgtgtgttatcccactggatcacatcctcatccacaacatagccctgcagttcttcatg
gacttcatgcaggcagctggggcccaggcagagctcttcttctggctcactgtggagggc
tacagggtgacggcgcagcagcagctggaggccatgcagggccaacagacagatggcaag
aagcagtccagcgccaccaaggggctgctgaaggccgctgcactgggtgtctacgaacaa
tacctctcagacaaggcgtcgcccagggtgcaggtggacgaagcacccgtcacaacacta
ggggagaagctacagaaagacgaccccacgccagagatatttgatgaaatccagaaaaat
gtgtatgacatgatgctacgtgatgagcgctactacccctccttcaagcagagtcctctc
tatgtccgcatgctagcagagttagacatgttgaaagagccgagctaccggggttctgat
gacggcgacggagaatccttcaatggctctccaacaggaagcataaacctatctttagac
gacttgtccaactcctgccatgatgaaactatgcacctccatgccttcatctctgacaca
ggggtgtgcaacgaccacggtaagacctacgcactgtacgccatcaccgtgttcagacgc
agccatgacggcagtgaggactgctggaagacctatcgccgctactctgacttccacgac
ttccatatgagggtcattgaacagtttgagaacttggcgtcgatcctcaagctgccaggg
aagaagactttcaacaacatggacagagacttcttggagaaaagaaaaaaagacctcaat
acgtacctacagttgctgctcaacccagagatggtgaaggcctgtccaacgctgattcct
tatgtatatgacttcctagagaacaaggcctacagcaagggcaagggagagtttgcacgc
aagatagacacatttgtaaatcctctgaggagttcgatgagaaatgtgtcaaacgcggtg
aaagggctgccagacagtctggctgaaggcatgaccaaggtctctgacaacatgggccgc
atgtcagaaagactgggtcaggacatcaaacagtccatactcaaggtgcctccactcctc
ccaaagtctgacatcgaccctgaacactgtcgggtttctgctcagcttgatgacaacgtg
gatgataacatcccgctaagggtaatgctgcttctcatggacgaagtatttgacctcaag
gagaaaaaccagtggctgcgcaggaacataaagaacctgctgcagcagctcattcgggcc
acgtacggagacaccatcaacaggaaaattgtggaccatgtggactacttgacctcacct
gagcaggttgcagactacgtcaagaagttcagggattcctactggcccaacggaattctg
gctgagacgccaccccgtcgggacaagagcatccgcatgaggacacgaatagctgccaag
accagtctgttgggcatcatgccagacgagctgaagcacatcatcggagcggacaccacg
agaaaaggcattctccgtgttttcgacatgtttcagtaccaacccatgaaccgtcggcta
gtctacgttttcctggagggcttcttggagacgatgttcccccagtacaaattccccgag
ctctttgtcaagttgcactcccgctcgccacgcgtccacagatatggccagaaactcaaa
tcctcctccctcaagaggtga
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