Cyclopterus lumpus (lumpfish): 117738870
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Entry
117738870 CDS
T09199
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117738870 (thrb)
04081 Hormone signaling
117738870 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117738870 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117738870 (thrb)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117738870 (thrb)
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117738870 (thrb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117738870
NCBI-ProteinID:
XP_034400886
Ensembl:
ENSCLMG00005008927
LinkDB
All DBs
Position
11:complement(16150955..16225469)
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AA seq
508 aa
AA seq
DB search
MNYCIPDMYEMPHSGMGGYAVQGGGEHCMYSGEGPGYGPCEPQPLHHAPCMDQAWPPGQH
YSCSYAGGSPGFKSDFCNMEIPLSHFHHQPEYFPEIKPDFSHLQWMQEVHKKGYIPSYLD
KDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQ
ECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKEELQKTVLDRQEPTQEEWDLI
RMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAAGVKETKPEDIGQA
SMVNTPEGNKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIM
SLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALL
QAVILLSSDRPGLSSVERIERCQEEFLLAFEHYINYRKHKVAHFWPKLLMKVTDLRMIGA
CHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcataccagacatgtacgagatgcctcactcggggatgggaggctacgcg
gtgcagggcggtggggaacactgcatgtactcgggcgagggacccgggtacggaccttgt
gaaccccagcctctgcaccatgcgccttgcatggaccaggcgtggccgcccggccagcac
tactcttgctcctacgccggcggctcgcccggtttcaagagcgacttttgcaacatggag
atccctctcagtcatttccaccatcagcctgaatatttccctgagatcaaacctgacttc
tcacacctgcagtggatgcaggaggtgcacaagaaagggtacattccaagttacctagac
aaggatgagctatgtgtggtgtgcggggacaaagccacgggctatcactatcgctgcatt
acctgcgaaggttgcaagggtttcttcaggcggacgatccagaagaacctcaacccgacc
tacgcttgtaagtacgaggggaagtgcgtcatcgacaaagtgacgagaaaccagtgccag
gaatgtcgcttcaagaagtgcattgcagtgggaatggccaccgacctggtgttggacgac
agcaagaggctagccaagcggaagctaattgaggagaaccgggagcgtcgtcggaaggag
gaactgcagaagacggtgttggaccgacaggagcccacccaggaggagtgggacctcatc
cgtatggtgactgaggcccatatggccacgaacgcgcaaggcaaccactggaagcagaag
cggaaatttctggtcgaggaagctatgcttcttaatgaaataacatgtaatttattctat
acttctgaccagagtgcagcgggggtgaaggaaactaagcccgaggatattggtcaagcg
tccatggtcaatacgcctgaaggaaacaaagtggatatagaagccttcagtcagtttaca
aaaattatcacccctgccataacccgagtggtggactttgccaaaaaactgccaatgttc
tgtgagctgccttgtgaagaccagatcatcctgttgaaaggctgctgcatggagatcatg
tcactgcgagctgctgttcgctatgatccggagagcgagaccctcacgctcaacggcgag
atggcagtcacgcggggtcagcttaagaacggcggcttgggcgtagtgtcggatgccatc
tttgaccttggcgtgtcgctatcctccttcaacttggatgactcggaggtggctcttcta
caggctgtcatcctgctttcatctgatcgtccgggcctgagcagcgtggagcgaatagag
cgctgccaggaggagttcctgctggccttcgaacattacatcaactaccgcaaacacaaa
gtggctcatttctggcccaagctgctaatgaaggtgacggacctgcggatgatcggcgcc
tgccacgccagccgattccttcacatgaaagtggagtgtcccaccgagctattccctcct
ctcttcctggaggtcttcgaagactga
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