Cyclopterus lumpus (lumpfish): 117738938
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Entry
117738938 CDS
T09199
Symbol
dlc1
Name
(RefSeq) rho GTPase-activating protein 7 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117738938 (dlc1)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117738938 (dlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
Motif
Other DBs
NCBI-GeneID:
117738938
NCBI-ProteinID:
XP_034401021
Ensembl:
ENSCLMG00005007045
LinkDB
All DBs
Position
1:complement(15166578..15241606)
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AA seq
1892 aa
AA seq
DB search
MPVAIRKRSWEEHVTHASGLQYSYDDLDLVCCHGVGSEGPWMGAGSSKQGRRTRCASMPE
GCHQLPTQDLAQTLEVTASVVCDNTASEQLKLMDSDVKVPVDLSVHGPNELVDVNIAHRA
SESEHLHIANIGKSGDFHCNSNREIISCAICSSSHTKKTINGEIGGESSLSHNICNDDNV
FKSPHISREGQQCIFISSNNGPLLSRLAGEPPGKLPNHQETKESHTEGYSRPPEISEAAL
NQFSAELEPQTDLPDLEGEKISTFGHADTSVTLPVGVLHSSVNTMESGDVMSQANNTVET
VVTLVVEEVCDKGVSEHQSTEAAVKLDGLNDPETLNENTGLHSSEAQGVEQDHHDCPGGL
DPAHGCEISHQALLEPCNAGMTAMKGPQGEESAQEEGSQKAAAEVRYEPIISSDTCFNGQ
CCSVTVNSNMSSEKLDTGYLEENPMHTKMTQSSDQYVETTTSISQPIENTDVRELACCDD
ETIALQLDTIPEVSYVEPDDTPVLDPQKNIASDFNQNPHVQQSHMDVKHAGSEQQTENLP
PCPAEVNDELSPGGLHGNQALGCYLSESPASEVADGQREHQRPGATVSRMDVHAVIHNDT
QLASPALEGTNEAGDPKVDGVVQVRMRKREHARLDSMVLLLMKLDQLDQEIENALSATSS
MDSTPTLHRRPLQEFDLGSVPAASQNPPHPHLLAACTSGPTPALGAKPKSGSTSTIPETE
QAEIEAKEACTWLRAAGFPQYAQLYEDPLCLDALFPIDISSVTRDHDFLDRDAIEALCRR
LNTLNKCALMRLEISPQRKRSEDSDEDEPCAISGRWTFQRDSKRWSRMEELEVFSTLPTD
AAPPSFPKDQISQKGKLALLEGNSSESVLTDLSEQPEVGSIHSSGSRGRGEEKSHGREEP
ALTNEAVPTGATRASSVASMCSSSGTGGSGCVNEDSLSDGMPPSPLETLGQFTFDMKAGM
GGQGGSLDIGGDSGKSTRSRAKSFLKRMESLRLRSGTSSKRKKKVSASGGKIEISGPVIK
EGLDDDKLRRLNCVDISSINLNQNLNHQRNPTQTMTLNRNRSVSYSTQTSNGSTGSTGSS
QSEASSESAVSTPSPVTRARSHSTVAGSSKRGGMYLEGFDPFSIPQQDSDRQPTPPPKSA
PPIPCQASKGRTVDEQNNRNNCSVRDNSRQAEEEEEEEEGEDGMIFFFLPEGHKPGTFPK
ALQDGSSRNNNGNDNGNSVILRGRQSRRQRHCSSGSVDSRLSFYDNVPYNEREEEEGEEE
EGDERKLEQVLQHVSGLQRFVNAWSEVVACEEEEEEEEEEEEGDSDSALDSASPCPSSPL
QNRLEETENGSDQDSTGNPLGEGEEGMRERRDSGVGASLTRTSRPQKLRWPSFQNSHRPS
LASAQLQISCQSVLQMNLLQKFSLLQLTALLERHTPTNKHGFSWAVPKFMKRIKVRDYKD
RNVFGVPLQVIVQRTGQPLPQGIQQAMRYLRNQCLDQVGLFRKSGVKSRIQALRQMNEAS
GVDGGGVNYEGQSAYDVADMLKQYFRDLPEPLLTSKLSETFLQIYQYMPKELRLQAARAA
VLLLPDENREALRTLLCLLSDVTASVSENQMTPTNLAVCLAPSLFHLNTLRRKESSSPRV
MNRKQTLGKPDQRDLNENLAATHGLAHMIQECSKLFRMPEEMNRCRNSYVEQALLPRRLQ
ELAGEEAGPGGYRVCLQESLDALLKDAKDKFKGYDSCSTPEHAELACRKVHDGFPLRLWK
VTVEVPASPEEVLMRVLREQGYWDEDLLESRVVETLDERTEVYQYVRNTMAPHPTRDHLV
LRTWVTDLPKGACALVCTSVDHEGARVVGVRTNVLTSRYFIEPCGTNKSRLTHISRNDCR
GRFPEWYNKLYGHLCAAEVARIRDSFTVPMDK
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagccatacggaaaagaagttgggaggagcacgtgactcatgcttcaggatta
cagtacagctatgatgatctggacctggtctgctgtcatggggtgggcagcgaggggcct
tggatgggagcagggtcttcaaaacaaggtcgacggacgaggtgtgcctccatgcctgag
ggctgccaccaactgcccacacaggacctggctcagacacttgaggtgacggcctcggtt
gtgtgtgataacactgcatcagaacagctgaagctaatggacagtgatgtaaaagttcca
gtggatttgtcagttcatggtcctaatgagctggtggatgttaatattgcccatagggcc
tctgaatcagagcatctccatatcgcaaacattgggaagtctggagattttcactgtaac
tcaaacagggaaattatttcttgtgcaatttgtagcagcagtcatacgaagaagactatc
aatggtgaaattggcggtgagagtagcctgagtcacaacatctgcaatgacgataatgtc
tttaaaagtccacatatctcacgtgaagggcaacaatgcatctttatctcttccaacaat
gggcctctactgtctagattggctggtgaaccgcctggcaaacttccaaatcatcaggaa
acaaaggagagccatacagagggttacagcagacctcctgaaatctctgaggccgcacta
aaccagttctctgctgaactggaacctcaaactgaccttccagatctcgagggagagaag
atttccacttttggccatgctgatacaagtgtaaccttaccggtcggtgtgctacacagt
tcagttaatacgatggagagtggtgatgtgatgtcacaggctaacaacactgtggaaaca
gttgtgactttagtggtagaggaagtatgtgacaaaggagtatctgaacaccagagcaca
gaggctgctgtcaagctggatggattaaatgacccagaaactctaaatgaaaatacagga
cttcactcaagcgaggcacaaggagtcgagcaggatcatcacgactgtcctgggggtttg
gatccggctcatggttgtgaaatatcccaccaggcattgttggagccgtgtaatgctggg
atgacagcgatgaaggggcctcagggagaggaaagtgcacaagaagaaggcagccagaaa
gcagcagcagaggtcaggtatgagccaatcatatcatccgatacatgtttcaatgggcag
tgttgctctgtgacagttaacagcaacatgtcatctgaaaaactggatactggatattta
gaagaaaaccccatgcatacgaaaatgacccagtcttcagaccagtatgtggaaacgacg
acctccattagtcaaccaatagaaaacactgatgtaagagagttggcttgttgtgacgat
gaaaccatagccctgcagttggatactatcccagaagttagctatgtggagccagatgac
acccctgtactggatcctcaaaagaacatcgcctcagattttaaccaaaatccacatgtt
cagcagtctcatatggatgttaaacatgcaggatccgaacagcaaactgaaaacttgcca
ccgtgccctgctgaggtcaacgatgagctctcaccagggggactccatggcaaccaagcc
cttggttgttacctcagtgagtcacctgcctccgaggtggcagatggtcagagggaacac
cagaggccgggagccacagtctcgagaatggacgtgcacgccgttattcacaatgacaca
caacttgccagtccagctttagaaggaacgaatgaagctggagatccaaaagtggacggc
gtggtccaagtgcgtatgagaaagcgtgagcatgctcgtctggactcaatggtgttgctg
ttgatgaagctggaccagttggaccaggaaatagagaatgccctcagtgccacctcctcc
atggacagcacgccaacccttcatcgacgaccactccaggagtttgatttaggatctgtg
ccagcagcatcacaaaatcctccacatccacatcttcttgctgcctgcacctcaggacct
acaccagcccttggagcgaaacctaagagtgggagcacatctaccattcctgagacagaa
caagctgagatcgaagccaaagaggcctgtacctggctccgagcagcagggttcccacag
tacgcccagctttatgaagaccctctctgtttagatgccctattccccatcgacatctct
tcagtcaccagagaccatgacttccttgaccgggacgctattgaggctctctgcaggaga
ctgaacaccctcaacaagtgtgctctaatgagactggagatatcaccgcaaagaaaaaga
agcgaggactctgatgaggacgagccttgtgccatcagtggccgctggaccttccagagg
gacagcaagcgctggtcccgtatggaggagctggaggttttttccacattgcccacggac
gctgccccaccctcattccccaaggatcagatatcccagaaaggcaagctcgccctgctt
gaaggcaatagttcagagagtgtgctgaccgacctcagtgagcagccggaagtgggctcc
atccacagcagtggaagtagaggaagaggagaagagaagagccacggaagagaagaacct
gctctgacaaatgaagccgtacccaccggtgccactcgtgccagctctgtagctagcatg
tgttcgtcctcgggcacgggcgggtcgggatgtgttaatgaggactctctgtctgatggg
atgcctccatcacccctggagacactcggacagttcacctttgatatgaaagcagggatg
ggggggcagggaggaagtctggacattggaggtgacagcggcaaaagcacacgatcaaga
gctaagagcttcctcaagaggatggagagtctacggctgcgcagcggcacctcctccaag
agaaagaagaaggtgagcgccagtggagggaagatagaaatcagtggccctgtcatcaaa
gagggtctggatgatgacaagttgcggaggctcaactgtgtggacatctccagtatcaac
ctcaaccagaacctcaatcaccaacgcaatcccactcagacgatgacgcttaaccggaat
cgctctgtatcctactccactcagaccagcaacggcagcactggaagtactgggagcagc
cagtctgaagctagcagtgaaagtgcagtgagcacaccgagcccagtgactcgcgctcgc
agccacagcacagtggcgggctctagtaagaggggaggaatgtatttggagggttttgat
cctttcagcattccccaacaagattcagatcgacagccaacacccccacccaaatctgcc
ccacccatcccctgccaagctagtaaagggagaacagttgatgagcaaaataacaggaac
aactgcagtgttcgagacaatagcagacaagcggaagaagaagaagaagaagaggaggga
gaggacggcatgatcttcttcttcttaccagaaggtcacaagcctggaaccttccccaag
gccctgcaggatgggagttcacgcaataacaatgggaatgataacgggaactcagtgatc
ctcagggggcggcaaagtagacgccagcgccattgctcttcaggctctgtcgacagtcgg
ctcagtttttatgacaacgtcccctacaatgagagggaggaggaggagggagaggaggaa
gagggggatgaacggaaactggagcaagtgctacaacacgtcagtggtttgcagcggttt
gttaatgcctggtcagaggttgtggcctgcgaagaggaggaagaggaggaggaggaagag
gaggaaggagactcagattcggcactggactcagcctccccgtgcccgtcctctcctctg
cagaaccgactggaggagacagagaatggaagtgaccaagacagcacaggaaacccgctg
ggagagggagaggaagggatgagagagagaagagactctggtgtcggggcatctctaacc
agaaccagcagaccacagaaactccgctggccgagcttccagaactcccaccggcccagc
ttggcctcggcccagctccagattagctgccaatctgttctacagatgaatctgctccag
aagttctccctgctgcagctcactgctctgctggagagacacacccctacaaacaaacat
ggtttcagctgggctgtgccaaagtttatgaagcgcatcaaggttcgggactacaaagac
aggaatgtgttcggtgtgccactacaagtcatcgtccagcgaacaggccagcccctccct
cagggaattcagcaagccatgcgctatttacgcaaccaatgtcttgaccaggtgggactt
ttcaggaaatcaggcgttaaatctcgtatccaagctctccgtcagatgaatgaggcgagc
ggcgtagatgggggaggcgtcaactacgagggccaatcggcttatgacgttgcagacatg
ctgaagcagtacttcagagatttaccagaacccctgctcacgagcaagctgtctgagacc
ttcctccagatttatcaatacatgccgaaggagctccgtctgcaggcagcgcgtgctgcc
gtgctgctgctgcccgatgagaaccgcgaggcgctgcggacgctgctgtgtctgctgagc
gatgtgacggccagcgtgtctgagaaccagatgactcccaccaacctggctgtttgtctg
gccccgtccctcttccacctcaacaccctgcgccgcaaggagagctcctcgccacgggtg
atgaacaggaagcagacactgggaaagccggaccagagagacctgaatgagaacctggct
gccactcatggcctggcacacatgattcaggagtgcagcaaactcttccggatgccagag
gagatgaatcgctgcaggaactcctatgtggagcaggcgttgctcccgcgccgcttgcag
gaactcgccggtgaggaggccgggccgggaggttacagggtctgcctgcaggaaagccta
gacgccctcctcaaagacgccaaggacaagtttaaaggttacgacagctgctccacacct
gagcatgcagaacttgcctgtaggaaggtgcatgatggttttccactgcggctgtggaag
gtgaccgtggaggtgcctgcgagtcctgaggaggttctcatgcgagtgctgcgggagcag
ggctactgggatgaggacctgctggagagccgggtggtggagaccctggatgagaggaca
gaggtctaccagtatgtcaggaataccatggcaccacatcccaccagagaccacctggtg
ctcagaacgtgggtaacggacctgccgaagggagcgtgtgcactggtgtgtacatctgtg
gaccatgaaggcgcacgtgttgtgggcgtccggaccaatgtcctcacctctcgctacttc
atcgagccctgtggaaccaacaaatccagactcacacatatttccaggaacgactgcagg
ggtcgtttcccagagtggtacaataaactatatggacacttgtgcgctgctgaggtggcg
cggatacgtgactcattcacagtgcccatggacaaataa
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