KEGG   Cyclopterus lumpus (lumpfish): 117739019
Entry
117739019         CDS       T09199                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117739019 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117739019 (exosc7)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117739019 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     117739019 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 117739019
NCBI-ProteinID: XP_034401153
Ensembl: ENSCLMG00005014251
UniProt: A0A8C2ZLQ9
LinkDB
Position
11:complement(6128207..6131080)
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GIKADIGKPRPGVPNEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPKVHISADEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKVGHRHVVDVTLQEKACSVASLIISVTHTGTVTCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMKLLQQEESLGKTRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagtcagcgaggccgaaaaagtgtacatcttacacggtatacgggat
gacttacgagtggacgggagaggctgtgaggactacagacacatggagatagagaccgac
gtggtgtccaacacagacggctccgccaaagtcactctgggccacacagcggttctggtt
gggattaaggccgacattggaaaaccgaggcccggggtgccaaatgaaggctacttggaa
ttctttgtagactgttcggccaatgcaacccccgagtttgagggcagaggaggggaggag
ctggggacggagctgagtaacacactctacaaagtcttcaacaacaaacacagcgtggac
ctgaagagcctctgcatcagtgcaggagaacactgctgggtcctctatgtggatgtgctg
ctcctgcagtgtgatggaaacctctacgatgccatctcagtagctattaaggcagctctc
ttcaacacaaaaattcccaaagtgcacatatcagctgacgaggaaggagggaaggaaatc
gagctgtcggatgacccgtatgattgcatgagactcgatgtagaaaatgttccttgcata
gtgacgttgtgcaaggtgggccacaggcacgtagtggacgtgactctgcaggagaaggcc
tgctccgtggcgagcctgatcatctctgtcacacacacgggcacggtcacctgcaccagg
aaggtgggcggaggcagcctggatccagagagtatctttgaaatgacagaggcagggaaa
cgggtcgggaaggcccttcatgctccgctcatgaagctgctgcagcaggaggagagtttg
ggaaagacacgacagaaagttggcttccttggttga

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