Cyclopterus lumpus (lumpfish): 117739172
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Entry
117739172 CDS
T09199
Symbol
ppp1r9a
Name
(RefSeq) LOW QUALITY PROTEIN: neurabin-1
KO
K17551
neurabin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117739172 (ppp1r9a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117739172 (ppp1r9a)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117739172 (ppp1r9a)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117739172 (ppp1r9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_5
SAM_2
PDZ
SAM_1
PDZ_6
SAM_PNT
PDZ_2
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
117739172
NCBI-ProteinID:
XP_034401359
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All DBs
Position
11:12421370..12469714
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AA seq
1136 aa
AA seq
DB search
MLKTEASGERTSLRSASPHRNAYRAEFQALKKAFDQPRLDGDSKPRDLERVKQPRGRQFG
GHVSRIKDMFMQMGSETVPEKAKGCDDSSPQKMVKPTNFINKADGSVIKLQHSVSADRVG
GAGAKFSETRKLFEQQSRDQSQSPVFPCGRDKRGSHEHLDDWRGARSNRGSTDSLDSLCS
RTEACSPTVSQLSAVFENVDHPNHGAHLKGVSRRALYSPDGCQRPGGDVSEDDSRQSPVR
GSYQSRTGGKFPTSSSSEDLLSASPGTETETELKPVPQEEEAQDKADKFELTGRDRRNLS
GVTTNGGQVNGSCEEEEKPSETRKQIEDLGVSKASKPTDGPVITDNAFEDTTPEPLPTPT
TPDGERQEDGDGSREEKSSESPKDQPEDPDEEYLGNERVIFNADGDACYQGWGESCTDPE
DDLYGDDEDIVYDPGSDLTEIPGLSHENKEDVPPKRKIRFSTAPITVFHTYSNEDYDRRN
EEVDPVASSAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTV
IEGGAAERDARIKVNDQIVEVDGTSLVGVTQSFAATVLRNTSGVVRFVIGRERPGQQSEV
ATLIQQTLEQERRQRELLEQQYAQYDADDDEQTGEYATDEEEEGAAVAGEDKNIEVFDLP
ESEEILSPSELDANKLFQKFRELQIKHTVTEAEIQKLKNKLASVEREKQRWEKEKNQLKA
SIEENKERMLKLESYWIEAQTLCHTVNEHLKEAQAQYQTLEKKYNKAKKLIKDFQQKEVE
FVQKEDAERRRLEEAEKAHLAEIQGLQVRVKHSVAELMQLMKQNGIQVNNNNSKXSAQQH
SPKRAAAQARGRPSPHSPSKSKSYGGISRDSISSTEGELPEGHGSPAHSRPGSIRSVASC
DGAATVLRAPAAKESSPRQTQHRPSTAGSQSPAMSSPSHCVEEHRQALDPGSSEPSAEDS
PEKLKVKGPSLSDDLSASSSSSVEISGLLSEAKMSGRSHTLVALLRLSLDMIDDEILDEG
QLQKQHHWQNRSITEWTSQQVARWLMGLNLEHHIPEFTAKNIDGEQLLQLESTELKALGV
SSSQDRALVKKKIKDLKVLMEKANRNREKVEKQREKLRKRELEQQQKEARKESTAE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagacggaggcctcaggggagaggaccagcctccggagtgcctccccccaccgt
aatgcctaccgggctgagtttcaggcactcaagaaggcctttgaccagcctcggctagat
ggagactccaagcccagggacctagaacgtgtaaaacagccaaggggtcgccagtttggc
ggccatgtcagtcgcattaaggacatgttcatgcagatgggctcagaaactgtgccagaa
aaggccaagggttgtgatgattcctcaccacaaaagatggtcaagcccaccaacttcatc
aacaaggccgatggatcagtgataaaactccagcattccgtatcagctgacagggttgga
ggtgctggagcaaagttctctgaaaccaggaagctgtttgagcagcagtcacgtgaccag
tcccaatcaccagtctttccgtgcggacgtgataaacgaggttcccacgagcatctagat
gactggcgaggtgctcggtctaatcgcggcagcacagactccttggactcactttgctca
agaacggaggcgtgctcgccaactgtcagtcaactgagtgctgtttttgaaaatgtcgac
caccccaaccatggtgcgcacctcaaaggagtcagcagacgggccctctactcaccagat
gggtgccaacgccctggaggtgatgtcagcgaagatgattcaagacaatctccagttcgt
gggagctaccagagcaggacaggtgggaagtttcccacatcgtcgtcttctgaggacctt
ctgagcgccagtcctgggacagagactgagacagagctgaaaccagtaccacaagaggaa
gaagcccaagacaaagcagacaaatttgagctcacgggcagagataggcggaatctttcc
ggggtcaccaccaacggaggccaggtgaatggttcatgtgaagaagaggagaaaccttcc
gaaacaagaaaacagattgaggatctaggggtgtccaaagcttcaaaacctacagatggt
cctgtgattaccgacaacgcttttgaagatacaacccctgagccattgccaaccccaact
actccagatggagaaagacaggaggatggggatggttcaagagaagagaagtcctctgag
tctcccaaagaccagccggaagaccctgatgaggaataccttgggaatgagcgggtgatt
tttaatgcagacggggacgcctgttaccagggttggggggagagctgcacagatcctgag
gatgacctctacggagacgatgaggatattgtctacgaccctggctccgatctgacagag
atccctggtctgtcacacgaaaacaaagaggacgtccccccaaagaggaagattcgtttc
agcactgcccccattacagtgttccacacctactccaacgaggactatgaccgtcgtaac
gaagaggtggatcctgtggcctcctccgcagagtacgagctggagaagagggtggagaaa
ctggagctctttcccgtggagctggagaaagatgaagatggcctggggatcagtatcatc
gggatgggtgtcggcgctgacgcaggactggagaaactgggtatcttcgtcaagaccgtc
atcgagggcggagccgctgagagagacgccaggatcaaggtgaacgaccagatcgtggag
gtggacgggaccagtctggtgggcgtcacccagagcttcgccgccaccgtcctcaggaac
acatcaggagtcgtcaggtttgtgattggacgggagcgtccgggccagcagagtgaggtg
gccacgctcatccagcagaccctggagcaagagaggagacagagagagctgctggagcag
cagtacgcccagtatgatgctgatgatgacgagcagacaggagagtacgccacagatgag
gaggaggagggggccgcggtcgcaggcgaggacaaaaacattgaggtgtttgatctgcca
gagtcagaggaaatcttgtctccttccgagttagacgccaacaaactcttccagaagttc
agagagctccagatcaagcacacagtgaccgaggccgagatacagaagctcaaaaacaag
ttggcgtcagtggagagggagaagcagcgctgggagaaggagaagaaccagttgaaggcc
agcatcgaggagaacaaggagaggatgctgaagctggaaagctactggatcgaagcgcag
accctctgccacacggtcaacgaacacctgaaggaggcgcaggcccagtaccaaactcta
gagaagaagtacaacaaggccaagaaactcatcaaagacttccaacagaaagaggtggag
tttgtccagaaggaggatgcagagaggaggcggctggaggaagctgagaaagctcacctg
gctgagatccagggactgcaagtcagggtaaaacactctgtagctgagctaatgcagctg
atgaagcagaacggcatccaggtcaacaacaacaacagcaaanncagcgctcagcagcac
agccccaagagggctgcagcacaagccagagggaggccctctcctcattcacccagcaaa
agcaagagctacggtggaatcagccgagacagcatcagctccacagagggagagctccca
gaaggacacggcagtccagcccacagtcggcctggttccattcgtagtgtggcctcttgt
gatggagccgctacagtcctcagagcccctgcagcgaaagaaagctcccccagacaaaca
cagcaccggccgtccactgcaggttctcagtctcctgcgatgtcgagcccctctcactgt
gtggaggaacacagacaagctctggatccgggctcctcagagccgtcagcagaggacagt
ccagagaaactcaaggtcaagggaccgtctctgagcgatgatctgagtgccagcagcagc
agctcagtggagatcagcggcctgctgagtgaagcaaagatgtcgggacgctctcacaca
ctggttgctctcctcagattgagtctggatatgatagatgatgagatcctagacgaggga
cagcttcagaagcagcatcactggcagaaccgcagcatcacagagtggacctcccagcaa
gtggctcgctggttaatggggctcaacttagaacaccacatcccagaatttactgccaaa
aacatagatggagaacagctgctacagctggagagcactgagctcaaggcccttggagtt
tcttcttcccaggaccgtgccctggtcaagaaaaaaatcaaagaccttaaagtcctgatg
gagaaggccaacaggaaccgagagaaagtggagaaacaacgtgagaagctacggaagcga
gagctcgagcagcagcagaaagaggcgcgcaaagaaagcacggcagagtga
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