Cyclopterus lumpus (lumpfish): 117739188
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Entry
117739188 CDS
T09199
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117739188
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117739188
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117739188
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117739188
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
117739188
NCBI-ProteinID:
XP_034401375
Ensembl:
ENSCLMG00005009248
LinkDB
All DBs
Position
11:16321582..16366125
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AA seq
505 aa
AA seq
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MFDCMDVLAVSPGQMLDFYTSSPSSCMLQEKALKACISGLAHREWQHRRSAHSCRECAPS
CLTPGGRFSQRLRVQEPQIVLRLFLKPDSPCALVVTPPPRRSHEFQIGGGAESLALPPLN
VGLPSRHKCTQAISGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFGVGMSK
ESVRNDRNKKKKESPKLELAESYELTAELETIIEKIRKAHQETFPSLCQLGKYTTNSSAD
QRVRLDLGLWDKFSELATKCIIKIVEFAKRVPGFTLLTIADQITLLKAACLDILILRICT
RYTPDKDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPIEMDDTETGLLSAICLI
SGDRQDLEEPSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERV
ISLKMEIPGSMPPLIQEMLENSEGQDGSSSSSTRSSSSSSSSSSTSAEAGASPGSKDSPN
EDAAAESPESLDTEGATATPPSDEP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgcatggacgtgctggccgtgagtcccgggcagatgctggatttctacacg
tccagcccgtcctcctgcatgctgcaggagaaggctctgaaagcctgcatcagcggactg
gcgcacagagagtggcagcaccgccggagcgcgcactcttgcagggagtgcgcgccttcc
tgtttgacccccggcggcaggttcagccagaggctaagggttcaggagccacagattgtt
ctccggctgttcttaaagccagactcgccgtgtgcgcttgtggtcacaccgcctcccaga
cgcagccatgagtttcaaataggcggcggggctgaatcgttggcgctgcctccgctcaat
gtgggactacccagccgtcacaaatgcacccaagccatatcaggttttttccgccgaagc
atccagaagaacatggtgtacacgtgtcaccgggacaagaactgcatcatcaacaaggtg
acgaggaaccgctgccagtactgccgcctgcagaagtgcttcggagtgggaatgtccaaa
gagtctgttcgaaatgaccggaataaaaagaagaaggagagcccaaagctggagctggcg
gagagctatgagctgaccgccgagctggagaccatcattgaaaagattcgtaaggcccat
caagaaaccttcccctccctctgccagcttggcaaatacaccacgaactcgagtgcagac
caacgcgtgaggctggacctgggcctgtgggacaagttcagcgagctggccaccaagtgc
attatcaagatcgtggaatttgccaaacgagtgcctggcttcacactgctgaccatcgcg
gaccagatcacgctcctgaaagctgcctgcctggacattctgatcctgcgcatctgtacg
aggtacacccccgataaggacaccatgaccttttcagatgggctgaccctcaaccggacg
cagatgcacaacgctggcttcggcccgctcaccgacttggtgttcacttttgccaaccag
ctgctgcccatcgagatggatgacacggagacaggcctcctcagcgccatctgtctcatc
tccggagaccgtcaggacctggaggagccctcaaaggtggaccagctccaggaaccgctc
ctggaggctctgaagatctacgtgaggaagcggcggcccagcaaaccgcacatgttcccc
aaaaccctgatgaagatcaccgacctgcgcagcatcagcgctaaaggagcagagcgggtc
atctctctgaagatggagatcccaggttcaatgccgccactcatccaggagatgctggag
aactcggagggccaagatggcagcagcagtagcagcacgcggagcagcagcagcagcagc
agcagcagcagcacttcggcggaggcgggggccagccccggcagcaaggacagccccaac
gaggacgccgccgctgagtcgccggagtcgttggacaccgagggcgctacggcaacgccg
cccagcgacgagccctag
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