Cyclopterus lumpus (lumpfish): 117739205
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Entry
117739205 CDS
T09199
Symbol
gdf6b
Name
(RefSeq) growth/differentiation factor 6-B
KO
K20012
growth differentiation factor 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117739205 (gdf6b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117739205 (gdf6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117739205 (gdf6b)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Transforming growth factors (RSTK binding)
117739205 (gdf6b)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
117739205
NCBI-ProteinID:
XP_034401390
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Position
11:complement(3472427..3474114)
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AA seq
412 aa
AA seq
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MDLYHVASLCGALLFVWGIPRSHTLAISPPAAPKSSKVSRTFDGQQASKYFKEFYAPPHV
DRNYKATSKDSVEPHDYMLSIYKTFSTAERLGLNASFFRSSKAANTIASFVDNGQDDLPL
LPLRRQQYLFDVSTLSKKAEVLGAELRIYTKVSGNFRISETEPVDVQLLSCHDRQLLDSK
TLDLQDAQRPKWEVLDVWEIFKEQQYLSHGKHFCLELRAMLDNPERELDLHHLGLNRHGR
PQQKKAILVVFTRSKKRQTLFSERREGRALLGLERKAKERGPGAKASRRRRTAASKTRHG
KRHGKKSKSRCSKKPLHVNFRDLGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAII
QTLMNSMNPSNMPPSCCAPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatctctatcacgtcgcctccctctgcggggctctgctcttcgtgtggggaatcccc
cgctcgcacactctcgctatctcccctccggcggccccgaagagcagcaaggtgtcgagg
acctttgacggacaacaagcctctaaatacttcaaggagttttacgcgccgccgcacgtc
gacagaaactataaagcgacctctaaagactccgtggagccgcacgactacatgctgtct
atctacaagaccttctccacggcggagaggctgggactcaacgccagcttcttccgctcc
tccaaagctgccaacaccattgcgagttttgtagacaatggacaagatgacctcccactc
ctccctctgaggagacagcagtatctgttcgacgtctcaacactctccaaaaaggcggag
gtgctgggagctgagctcaggatatacaccaaagtgtctgggaatttcaggatttcggaa
acagagcccgtcgacgtccagctcctctcctgtcacgaccggcagctgctcgactccaaa
acgctggacttgcaggacgcccagaggccgaagtgggaagtgttggacgtgtgggaaata
ttcaaagagcagcagtacctgagccatgggaagcatttctgcctggaactcagggccatg
ctggacaacccggaaagggagctggacctgcaccatctgggcttgaacaggcacggcagg
ccccagcagaagaaggctatcttggtggtgttcaccaggtctaagaagaggcagaccctc
ttcagtgagaggagagaggggagagcgttgttgggtctggagaggaaggccaaagagagg
ggccctggtgccaaggccagcaggagacggaggacggcggcatccaagacccgccacggg
aagagacacggcaagaagtccaaatcccggtgcagcaagaagccgctgcatgttaacttc
agagacctgggctgggacgactggatcatcgccccactggactatgaagcgtaccactgc
gagggggtgtgcgacttccccctgcgctcccacctggagcccaccaaccacgccattatc
cagactctgatgaattcaatgaaccccagcaacatgccgcccagctgctgcgccccgtcc
aagctcagccccatcagcatcctctacatcgactcaggaaacaacgtggtctacaaacag
tacgaggacatggtggtggagtcttgtggctgtaggtag
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