Cyclopterus lumpus (lumpfish): 117739255
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Entry
117739255 CDS
T09199
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117739255 (igf2bp3)
03041 Spliceosome [BR:
clum03041
]
117739255 (igf2bp3)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117739255 (igf2bp3)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117739255 (igf2bp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
RRM_1
KH_2
KH_KhpA-B
MOEP19
RRM_5
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
117739255
NCBI-ProteinID:
XP_034401445
Ensembl:
ENSCLMG00005019273
LinkDB
All DBs
Position
11:12713682..12732264
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AA seq
584 aa
AA seq
DB search
MNKLYIGNVSAEASEEDLETIFVQWKIPHNSPFLVKTGYAFVDCPDEKAAMKAIDVLSGK
VELHGKVLEVEHSVPKRQRSCKLQVRNIPPHMQWEVLDGMLAQYGGVESCEQVNTDTETA
VVNVRYAAKDQAKLAMEKLNGSMMENFALKVSFIPDETAAPEGPSAGGRRGYIARGTSRS
DSPSLGARPKLQSDIPLRILVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAE
KPITIHSTPEGCSNACTTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKK
IEQDTETKITISALQDLTVYNPERTITVKGTIEACARAEEELMKKIRESYESDMAAMNLQ
SNLIPGLNLNALGLFPSGAPGMGPSMSSIPPPGAHGGCSSFGQGHPESETVHLFIPALAV
GAIIGKQGQHIKQLSHFAGASIKIAPAEEVGSTPQRRVTIAGPPEAQFKAQCRIFGKLKE
ENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTPDENDQVI
VKISGHFFACQLAQRKIQEILAQVKRQQQPKPTSGAQPPQPRRK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctatacattggcaacgtgagcgctgaggcgagcgaggaggacctcgaaact
atctttgtgcagtggaagattccgcacaatagtccgtttcttgtcaaaactggctatgcg
tttgtggattgcccggacgagaaagctgcaatgaaggccatcgatgttctttcaggtaaa
gttgaacttcatgggaaagttctcgaagttgagcactctgtccctaaacgtcaaaggagc
tgtaagctgcaggtcaggaacatcccgcctcacatgcagtgggaggttttggatggtatg
cttgctcagtatggtggagtagagagctgtgaacaagtaaacactgacacagagactgcc
gtagtcaacgttcgatatgcagccaaggaccaggccaagctggcaatggagaagctgaat
ggatctatgatggagaactttgccttgaaagtgtcgtttatcccagatgagacggctgcg
ccagagggtccttcagcggggggcaggagaggctacatcgcccgtggaacctctcgttcc
gactctccaagtctgggcgcccggcccaaattgcagtcggacatcccgctgcgcatactg
gttcccacgcagtttgtaggggcaattatcggcaaggaaggtgccaccatccgcaacatc
accaaacagactcactcaaagattgacatccataggaaagaaaatgccggtgcagcagag
aagcccatcacgattcactccacccctgaaggttgttcgaacgcttgtacaacaatcatg
gagatcatgcagaaggaagccctcgacacaaagttcactgaggagatcccactgaagata
cttgcacacaacaacttcgtaggaaggttaattggaaaggaagggcgcaacctgaagaaa
atcgagcaggacacggagaccaagatcacaatctcagctctccaggacttgactgtgtac
aacccagagcggaccatcacagtgaagggcaccatcgaggcgtgtgcaagagccgaggag
gagctgatgaagaagattagggaatcgtatgagagtgacatggctgctatgaatctccag
tccaacctgattccaggcttgaatctgaacgctttgggtttgttccctagtggagcacca
ggcatgggtccctccatgtccagtatcccacctccaggagcccacggtggatgctcatca
tttgggcagggacacccagagtcggagacggttcacctgttcatccctgctctcgcggtt
ggcgccatcattggaaaacagggtcaacacatcaaacagctgtcacactttgccggagcc
tcaatcaagattgcccctgcagaagaagtgggttccacaccccagaggagggtcaccatc
gctggaccgccagaggctcagtttaaggctcagtgtcgcatctttggaaagctgaaggaa
gagaatttctttggacccaaggaagaggtgaagctagaggctcacatcaaggttccttcc
tttgccgctggacgagtcatcgggaaaggtggaaaaacggtaaacgagctgcagaacctg
acctgtgcagaggtggtggtgcccagggaccagacgcctgatgagaatgaccaggtcata
gtcaagatcagtggacacttctttgcatgccagctggctcagagaaagattcaggagatc
ctcgcccaggtgaagaggcagcagcagcctaaacccacatctggagcccaacctcctcag
ccccgcaggaagtaa
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