Cyclopterus lumpus (lumpfish): 117739295 Help Entry 117739295         CDS       T09199                                  Symbol col22a1 Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism clum  Cyclopterus lumpus (lumpfish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  117739295 NCBI-ProteinID:  XP_034401510 LinkDB All DBs Position 11:complement(17712264..17757949) Genome browser AA seq 1622 aa AA seqDB search MELRMGFRITLLSVILALTLSGERVEAQRAGCKNVHYDLAFILDTSSSVGKENFEKIRQW VANIVESFDVAPDKTRVAVVRYSDRPTIEFTLGKHGTLEDVKRAARNIRYLGGNTMTGDA IGYTTANIFTERNGARPTARGIQRVAILLTDGRSQDYVLEPSKAAAKAGIRLFAVGIGEA LKVELEEIAAEPKSAHVFHVTDFNAIDKIRGRLRRRLCENVLCPNMKVQPDRFKPNSTSY GLDEVPGFDLMEHFHVRDILGAREDEGQSSYVRLGAMPIVQQTEDVFPQGLPDEYAFVTT FKFRKTSKREDWYLWQVYDKYGIPQVSIRLDGENKGVEYNAVGLTKDAVRAVFKNPEVDN LFDRNWHKIALSVEAKSVSLYLDCKHIQTLPIGDREDIDIQGKTVIGKRLYDSVPIDFDL QRMMVYCDSKHAELETCCDIPNGPCPKKVVTEAPPVEIPAPTPKTVEQQRGPQVNCSCPA GDTGAMGAPGVAGPKGGKGDTGPKGAVGAPGIRAEKGEIGKVISVKGDRGAKGDTGSIGL TGAPGPKGEKGLGGVPGIDGLSGYKGDRGEAGLPGGSGLPGVAGQKGIQGDEGVSGTPGP KGVTGESGGKGEKGTSGDKGQAGFDGLPGKPGVHGKDGLRGLAGASGPSGIKGIKGERGL AGLPGDVFQKEGLRGDKGDAGPPGPSGPEGPQGPQGAPGHQGLPGEPGEFGQRGKKGESG LHGVDGLPGPPGLLGPSGSPGKQGHTGPPGLPGEIGFSGKHGEAGKPGLPGKDGLDGLPG NDGALGPRGERGAEGFSGKPGTKGDDGPPGPRGPPGDRGEPGSSGQTGGDGVRGDRGVPG ERGQDGSLGPKGEKGDKGEVGVRGLPGIPGNVANVIPEPGEPGMPGEKGAKGDQGNQGEI GQRGLPGEQGFKGPAGLAGPKGDAGLTGETGRVGHPGPPGIAGSQGARGLPGNVGIPGII GPPAPPGQRGDTGEAGKPGQSGPPGPPGYGGLTGPPGPPGKGKDGQTGDQGPQGIQGPPG LKGQTGARGEKGSPGERGPAGDGKVGQPGPSGNNGDPGPSGIRGLPGVAGLQGPAGHNGL TGRPGDKGSPGDPGKNADLSDLNLKDVCSDCPAGPPGLPGLPGVPGDKGPLGPQGKNGQD GYQGPSGTAGAQGPPGADGAKGIKGDRGPPGGPGDKGEKGHTGPPGHPGTAGLMGTPGND GQPGPIGPPGSPGEKGKEGLKGIQGPPGLPGLIGQPGKMGKDGGPGEPGESGKQGEPGPL GNPGLRGLPGFKGHRGESGAPGPKGEDGKPGSSGRDGKPGKEGSMGPPGREGLSGPRGES GKQGEPGPSGKAGLPGTPGLRGDKGEAGNPGLPGFSGPKGPAGPFGPIGPEGKQGMPGRV GDRGLRGDKGDSGVKGDKGQSGDPGMPGNPGPSGRKGHTGMMGMSGPTGEVGAPGPQGPS GNPGIPGQRGESVSLEQMRRLIQEELAKQLDAKMAYLMAQIQPAHVKSTAGRPGPPGSSG KDGNSGRPGPPGEPGMPGQNGGEGSRGPLGPKGDKGTRGEKGEPGVGDRGEQGPSGPIGP AGLPGYGKDGGPGQAGAQGEPGNPGPHGQTGPPGPTGQCDPTQCAYYASLAQRPHTKNFK GT NT seq 4869 nt NT seq  +upstreamnt  +downstreamnt atggaattacgcatgggattcaggatcactttgctctcggtcatcctggcgttgactctt tccggcgagagggtggaagctcagagagcaggatgtaaaaatgtccactacgacttggcg tttatcctggatacatcttccagtgttggaaaggagaattttgagaagatcaggcaatgg gtggccaacattgtcgagtctttcgacgtggcaccggacaagacaagagtcgccgtggtt cgctacagcgacagacccaccatcgagttcaccctggggaaacacgggaccctggaggat gtgaaacgagctgcccgcaacatacgctacctggggggaaatacaatgaccggggatgct atcggctacaccaccgccaacatcttcaccgagcgcaacggagcccggccgacggcccga ggcattcagagggtggccatcctcctcacggatggccgaagccaggattatgttctggag ccctccaaggcggccgccaaagccggcatcaggttgtttgccgtgggcatcggggaggcg ctgaaggtggagctggaggagatcgcggccgagccaaagagtgcccacgtcttccacgtg acggacttcaacgccattgacaagatcagaggcaggctgaggaggaggctgtgcgagaat gtcttgtgtccgaacatgaaggtccaacctgatcggtttaagcccaacagcaccagctat ggtcttgacgaggttccagggttcgacctgatggagcacttccacgtgagagatattctg ggagccagagaggacgaaggccaaagttcctacgttcgcctcggcgccatgcccatcgta cagcaaacggaggatgtgtttcctcaagggttgccagacgaatacgccttcgtgacgacg ttcaaattcaggaagacctcaaaacgcgaagattggtacctctggcaggtttatgacaaa tatggaatcccgcaggtgtccatccgattggacggcgagaacaagggggtggagtacaac gccgtcggcctgacgaaagacgccgtccgagccgtgttcaagaaccccgaagtcgacaac ctgtttgaccgcaactggcacaagatcgccctcagcgtggaggccaagtccgtgtctctg tacctggactgcaagcacatccagactctgcccatcggagaccgggaggacatcgacatc caggggaagacggtgatcgggaagcgactgtacgatagcgtgccaatcgattttgacctc cagaggatgatggtgtactgcgattccaagcatgcggagctggaaacctgctgtgacata cccaatggaccttgccccaagaaggtcgttacggaggccccgcctgtggaaatccccgct ccgacaccgaagaccgtggagcaacaacgaggccctcaagtgaactgttcctgccctgca ggagatacgggagcgatgggtgcgcccggtgtcgcaggtcctaagggtggaaagggtgac accggccctaagggcgccgtcggagcgccgggaatcagagcggaaaaaggagaaattggc aaagtaatctctgtcaaaggtgacagaggtgcgaagggtgacacgggcagcatagggttg acaggtgctcctggaccaaaaggagagaagggactcggaggcgtgccgggcatcgacggc ttatccggatacaaaggagacagaggggaagcaggactgcctggtggttcagggctgcca ggtgtagctggacagaagggaattcaaggggacgaaggcgtttctggcaccccgggtccg aaaggtgtcaccggtgaatcaggtgggaaaggtgaaaagggaacttcgggagacaagggc caggcgggttttgatggattacctggcaaacccggagttcatgggaaagatggtttgaga ggactggctggtgcatccgggcccagcggaatcaaaggcatcaagggggagagaggcctc gccggattacctggggatgtgtttcaaaaggaaggcttgcggggtgataagggagacgct ggacctcctgggccttcggggcccgagggcccccaggggcctcaaggtgctccgggtcat cagggtctacccggggaaccgggagagttcggccagaggggtaaaaaaggtgaaagtgga ttacacggagtggacggccttcctggaccccctggtcttctaggtccatctgggtcacct ggaaaacaaggacacaccggacctcctggtctgcctggtgaaattggattttcaggcaaa cacggagaggctggaaagcctggtctccccggcaaagacggtctggacggccttcctgga aacgacggcgctttggggccccgaggagagcgcggagcggagggcttttcaggcaagccc ggaactaagggtgacgatgggcctcccggaccaagagggcctccaggggatagaggcgag cccggttcctccggtcaaactggtggggacggagtgcgcggggacaggggggtcccggga gaaagaggacaggatggatcacttggaccaaaaggggagaagggagacaagggcgaagtg ggagtcaggggactacctggcattccaggaaatgtggccaatgtcatccccgagcccggt gaacccggaatgcccggagagaaaggagcaaagggggatcaagggaaccaaggagagatt ggtcaaagagggttacctggtgaacaaggcttcaagggaccagccggactagcgggtccg aaaggtgacgctggactaacgggagagacgggacgtgttggacaccccggtccacccggc atagccggttctcaaggtgctcgcggattaccggggaacgtgggcatcccggggatcatt gggcctcccgctccgcccggacagagaggagacacgggcgaagcaggtaaaccaggacaa tcgggacccccgggcccacccggatatggcggtttgactggaccccccggaccaccggga aagggcaaagatgggcaaactggggatcaaggacctcaaggaatccaaggacccccagga ctaaagggccaaacgggtgctcggggagaaaaagggtcacccggagaacggggccccgca ggagacggcaaagtgggacaaccgggaccttcgggaaataacggagacccgggaccttcg ggcatcaggggtctgccgggagtcgccggtcttcagggcccagcaggccacaacggttta acgggaaggccgggagacaaggggtcgccaggagatcctggaaagaacgccgacctctct gacctcaacctgaaggatgtttgctccgactgcccagcgggtccacccggactgcccggt ctcccgggagtccccggggataaaggacccctgggacctcaggggaagaacggtcaagac ggttaccaaggcccgtcgggaacagccggagctcaagggccccctggagccgacggagca aagggtattaaaggggatcgaggacccccaggaggcccgggagacaaaggagaaaagggt cacacaggaccccctggccatccgggtaccgctggcttaatgggcacgcctggtaacgac ggacagcctggccccatcggccccccggggtcccctggagaaaagggcaaagagggtctc aagggaatccagggaccaccgggtcttcccggcttgatcggtcaacccgggaaaatggga aaagatggcggtccaggtgaaccaggagagtctggcaagcaaggtgagccaggaccacta ggaaacccggggctgaggggactcccgggcttcaagggccacagaggagaatctggtgct ccgggacctaagggagaagatggaaagcctggatcgtccgggcgagatgggaaacctggg aaagagggctctatgggacctccaggcagagaagggctgagtggaccaagaggagagtcg ggaaagcaaggtgaaccggggccatcgggaaaagcaggcctccctggaacgccaggtctt agaggagacaagggagaggccggcaacccaggattaccaggctttagtgggcctaagggc cccgcgggtccgtttggtccaatcggcccagaaggtaaacaggggatgccaggcagagtg ggtgatcgtggcctcagaggagacaagggagattcgggcgtgaagggagataaaggacaa tcaggagatccaggtatgcctggaaaccctggaccctctggccggaagggccacacgggg atgatgggcatgtctggaccaacaggagaggtcggagctccgggccctcaaggaccttcg gggaatcctggtattccaggccaaagaggagagtcggtgtcactggagcagatgaggcga ctcatccaggaggagctggccaaacaattagatgccaaaatggcttacctcatggctcag atccagccggcccacgtgaagagtacagcaggccgcccgggacctccaggctcttcgggt aaggacggcaattctggacgacccggaccccccggagagcctggtatgcccggacaaaat ggcggagaaggatccaggggacccttgggccctaaaggcgacaaaggaacgagaggagaa aagggagaacccggtgtcggcgacagaggagagcaaggaccctctggcccgataggtcca gccggtctgcccggatacggtaaagacggaggcccggggcaagctggagcccagggagaa ccgggaaaccccggcccccacggtcaaaccggacctccgggccccactgggcaatgcgac cccacccagtgcgcctactacgccagcctggcgcaaagaccccacaccaaaaatttcaag gggacctaa

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