Cyclopterus lumpus (lumpfish): 117739320
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Entry
117739320 CDS
T09199
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117739320 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117739320 (vps45)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117739320 (vps45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
117739320
NCBI-ProteinID:
XP_034401551
Ensembl:
ENSCLMG00005005197
UniProt:
A0A8C2WZ38
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All DBs
Position
11:complement(22159739..22175966)
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AA seq
566 aa
AA seq
DB search
MNVTLAVKQYVSKMIESSGPGMKVLLMDRETTSIVSVVYTQSEILQKEVYLFERMDSQNR
DSMKHLKAICFLRPTKENVDYLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EIQEFYGDFIAVNPHFFSLNLQGVARGRSWEPSMLSRCTQGLTSVLLALKKCPMIRYQLS
SDVSKRLAESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELSCQ
NDHSNAQQSVRRLLQNPRLSELDAVRLVMLYALRYERHSSSALPALMDELSRRGVSERHR
KMVKSVVEYGGKRVRGSDLVTPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGASSLRDRPQDIMVFLIGGATYEEALTVYNLNRSTPGVRIVLGGSSIHNT
KSFLEEVMASAGHSGDRAQGSGRSRR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgctcgcggtgaagcagtacgtctccaagatgatcgagagcagcgggccc
gggatgaaggttctgctgatggaccgggagacgaccagcattgtgagtgtggtctacact
cagtcagagatcctccagaaagaagtttacctgtttgaaagaatggattctcagaacaga
gacagcatgaagcacctgaaggccatctgcttcctgaggcccaccaaggagaacgtggat
tatctgatccaggagctgcggaggcccaagtacagcgtctacttcatctacttcagtaac
gtgatcagtaagagtgagatcaaagctctggctgaggccgacgaacaggaagtggtggct
gagatccaggagttttatggagacttcatcgcggtgaatcctcactttttctctctcaac
ctgcagggagtcgccagggggcggagctgggagccctccatgttgtcccggtgcactcag
ggtttgacctccgtcctgctcgctctgaagaaatgtcccatgattcgataccagctgtcc
tccgatgtgtccaagcgcctcgccgaaagcgtcaagcaaatcatcacgaaggaatacgag
ctgtttgacttcaggaagacggaggttcctcctctgctgctgatcctggaccgcagcgac
gacgccatcacaccgctgctcaaccagtggacttaccaggctatggtccatgagctgctg
ggtctcaacaacaacaggatcgacctctccagggttcctgggataagcaaagacctgaag
gaggtggttctgtctgcagagaacgacgagttctacgccaataacttgtacctgaacttc
ggagaaatcggcaccaacattaaaaacctgatggaagatttccagaagaagaaaccaaaa
gaacaacagaagctggagtccatcagcgacatgaaggcctttgtagataactacccccag
tttaagaagatgtctggcaccgtgtccaaacatgtgacggtggtgggggagctgtcccgg
ctggtgtcggagcgtcagctgatggaggtgtcagaggtggagcaggagctgtcctgtcag
aacgaccactccaacgcccagcagagcgtccgccgcctgctgcagaacccgcgtctgtcc
gagctggacgccgtgcggctggtgatgctctacgctctgaggtacgagcgccacagcagc
agcgcgctgccggcgctcatggacgagctgagccggagaggcgtgtcggagcggcaccgc
aagatggtgaagtcggtggtggagtatggcgggaagagagtcagaggaagtgacctcgtc
acaccgacagacgccgttgccatcaccaaacagttcttcaaaggcctcaagggggtagag
aacgtgtacacgcagcatcagcctctgcttcatgacactctggatcagctgatcaaaggt
cgactgaaggacagtcagttcccttacctgggggccagcagcctgagagacaggcctcag
gacatcatggtgtttctgattggtggagccacgtatgaagaagctctgactgtttacaac
ctgaaccgcagcacacctggagtccgcatcgtccttggaggaagcagcatccacaacacc
aagagcttcctggaggaggtcatggcgtcggcgggtcacagcggcgaccgagctcaagga
agcggtcgcagccggcgctga
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