Cyclopterus lumpus (lumpfish): 117739330
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Entry
117739330 CDS
T09199
Symbol
gabpb2a
Name
(RefSeq) GA-binding protein subunit beta-2a
KO
K09454
GA-binding protein transcription factor, beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117739330 (gabpb2a)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117739330 (gabpb2a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
117739330 (gabpb2a)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
117739330 (gabpb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
GrpE
KH_KRR1_1st
Motif
Other DBs
NCBI-GeneID:
117739330
NCBI-ProteinID:
XP_034401567
Ensembl:
ENSCLMG00005005184
UniProt:
A0A8C2WU80
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All DBs
Position
11:22114029..22124147
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AA seq
419 aa
AA seq
DB search
MSLVDLGKRLLEAARKGQDDEVRNLMANGAPFTTDWLGTSPLHLAAQHGHYSTADVLLRA
GVSRDARTKVDRTPLHMAAAEGHTVIVELLVRSGADINAKDMLKMTALHWAAQHAHHAVA
ETLIKHGADVHALSKFDKTPFDIAVDVQNTELMLMLQEGMQNQVNMNQVSMNVETSTATN
QPQFIIQGIPGIQGGVVNLAELLNKANAGDSEEAMAASALDSSIQHATVVNEGGQRVITI
VTDQHGNLQTTGGMAPPFFVTMQHGQQMLAVPANTVTEEVVTEEPQAPPTRKRKLEAINN
HSDVGETELLQRQLHEANRKAQEYRQQLLRKEQEAEEYRVRLEAMSQTQANAAAISAAAN
AASPEEVVGGEEDEEEAAAGMVEEEGEMVVLQEGGIIMEGEEGQVTLVETGGETTEVSS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggacctcgggaagcgtctgctggaggcggcacggaaaggccaagacgat
gaggtcaggaacctgatggccaacggagcgccgttcaccaccgactggctggggacgtcc
ccgctccacctggccgcccagcacggccattactccaccgccgacgtgctgctgcgagcc
ggcgtcagcagagacgcccgcaccaaagtggaccggacgccgctgcacatggcggccgcc
gagggccacacggtcatcgtggagctgctggtccggagcggcgccgacatcaacgccaaa
gacatgctgaagatgacggcgctgcactgggcggcgcagcacgctcaccacgccgtcgcc
gagacgctcatcaagcacggcgccgacgtgcacgcgctcagcaagtttgacaagacgccg
ttcgacatcgccgtcgacgtgcagaacaccgagctgatgctgatgctgcaggagggcatg
cagaaccaggtgaacatgaaccaggtgagcatgaacgtggagaccagcaccgccaccaac
cagccgcagttcatcatccaggggatccccggcatccaggggggcgtggtcaacctggct
gagctcctcaacaaagccaacgcaggcgactcggaggaggccatggccgccagcgccttg
gactccagcatccagcacgccaccgtggtcaacgaggggggtcagagggtcatcaccata
gtgacggaccagcatgggaacctgcagaccacggggggcatggccccgcccttcttcgtc
accatgcagcacgggcagcagatgctggcggtgccggccaacactgtgacggaggaggtg
gtgacggaggagcctcaggctccgcccaccaggaagaggaagctggaggccatcaacaac
cacagcgacgttggagagacggagctgctgcagagacagctgcatgaggcgaacaggaag
gcccaggagtaccggcagcagctgctgcgtaaggagcaggaggcggaggagtaccgcgtg
aggctggaggccatgtctcagactcaggccaacgccgccgccatcagcgccgccgccaac
gccgcgagccccgaggaggtcgtggggggggaggaggacgaggaggaggcggcggccggc
atggtggaggaggagggggagatggtggtgctgcaggaggggggcatcatcatggagggg
gaggagggtcaggtgaccctggtggagacgggaggggagacgacggaggtcagctcctaa
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