Cyclopterus lumpus (lumpfish): 117739419
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Entry
117739419 CDS
T09199
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117739419
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117739419
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117739419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_5
Ank_4
UBA_ARI1
zf-RING_2
zf-RING_UBOX
Rcat_RNF216
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117739419
NCBI-ProteinID:
XP_034401701
Ensembl:
ENSCLMG00005001446
UniProt:
A0A8C2WD45
LinkDB
All DBs
Position
11:10135526..10154115
Genome browser
AA seq
1317 aa
AA seq
DB search
MGNTATKFRKALVGGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTPLHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQSDADLFVEDEDK
LTPCDHAERHHHTELALSLESQMVFSSSSTQQSNTDTHVETNLLQYKEPYEGLKLQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVTMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEESLASCGICLCSISVFEDPVDMSC
GHEFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPAIRWCPAARCERAVRLTRPGPGDSNPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFFCREGTPPDTRFIEDGVSEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPCHKIISA
ARLVQQKRQEFLASVARGVAPNDSPDPPRRSYPGGSWDWEYLGFASPEMGSRHSVLGAGD
QRERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDNTENLERGEGRRRV
LGLLDEDDPNILLAIQLSLQESRRERSLEGGPEGGTEGRVELDRGLERMRRPSGDPGDVA
LQSLNTDGPSGARGSSFPTSLLDPPRPPNRTDSTSQPPMSNSLPLPPPPPSLSAELLELG
DSLMKLGSITTPYDLDTHTQEQLCSHHTYNHSTLTAPYTIEPAYSDFSHRPDQNALNTPY
VLDHITITDPSYSHSSSYLAEAEYTASCSLEHTQNPAHTSSCNREHAVTYDSTPKPDISY
NPCPEHSSSYTQERPAAYALERPPKSAPQPLVQLCLLSPELEPELLLSPVIPPGGPFTPS
DPQSLEPLDPTASAQLLDNIMAWFNNNINPQNNPQSLALIPSPPTTETDSSPDTHTETES
ESQTSRDMTHAPLWQPLEGEPEADRGSASPCLGAAGLKTSRPSTLELEKRENNEEGVDAE
CVSDLLLDEAHTHPCSHSQRGNSPAHTAPATERDLDLILQLEGDQSPDEWEEQVHLV
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacagccaccaagttccgcaaggccctggtgggtggtgacgaggccctggcc
tggcagctctatgaaggcaaccctcagttcagggacggcctggacccgaatgcatcgtac
ggagagcagtaccagcacaacacgcccctgcattatgtctgccgccatgcaatgacgcgt
ctgctcaggtccttcctgttcagtaaagagggaaaccccaacaagcgcaatgtgcacaac
gagacgtgcctccacgtgctgtgccaaggcccacagatcctgctgctgccagagggagca
ctgtcaccacgactggcccgaccccagagggacgagcagcgtcgtgccgactgtctgcag
atgatccttagctggaccggtgccaggctggagggaggccagtacgagaaggccaatgtc
aacgccaccgacaatcaccacagcacctgtctgcactacgctgccgctgcaggcatgaag
agctgtgtggagctgctaatccagagcgatgcagacctttttgtggaggatgaggacaag
ttgacgccatgtgaccatgccgagcggcatcaccacaccgagctggccctcagcctggag
tcccagatggttttctcctcctcttcaactcagcagtcaaacacagacacacatgttgaa
accaacctgctgcaatacaaggagccttatgagggactgaaacttcaggacctgcgcagg
ctgaaagacatgctgattgtggagacggcagacatgctgcaagcccccctcttcactgct
gaagcgctgctccgagcacatgactgggacagagaaaagcttctggaagcctggatgtcg
gacgctgagggttgctgccagcgctcaggtgtgaccatgcctaccccgccacccagcggg
tacaatgcctgggacaccctaccctcacctcgaacccccaggaccccacgctcaccactc
acactcaccctcacctctccgactgacagctgcctcacacctggagaggagagcctggct
tcgtgtggaatctgtctctgctctatctcagtgtttgaggatccagtggacatgtcctgt
ggacatgagttctgcagagcatgctgggaagggttcctcaatgtaaagattcaggagggt
gatgcacacaatatcttctgcccggcctatgagtgctaccagttggtgccagtgcatgtg
attgaaagtgtagtttccagggagatggaccagcgatatctacagtttgacatcaaggcc
tttgtggagaacaatcctgccatccgatggtgtcctgcagcacgttgtgagcgggcggtt
cggctcacccgaccaggcccaggggacagtaacccacacagtttccctctgctgccctct
cccgccgttgattgtggcaagggtcacctattctgctgggagtgccttggtgaggcccat
gagccatgtgactgtcagatgtggaggaactggctccagaaagttacagagatgaagcct
gaggagttggcaggtgtgagtgaggcctatgaagatgctgctaactgcctgtggctgttg
accaactcaaaaccgtgtgccaactgcaaatcgcccattcagaagaatgagggatgcaac
catatgcagtgtgccaagtgcaagtatgacttctgttggatatgtctggaggagtggaag
aagcacagctcatcaacaggaggctactatcgctgtactcgctatgaggtcatccaacag
ctagaggagcagtccaaggagatgactgtggaggcagaaaagaagcacaaaagttttcag
gagttggatcgttttatgcactattatactcgcttcaagaaccatgaacacagttataag
ttggagcagaaattgctaaaaacagccaaagagaagatggagcagctaagcagagctttc
ttttgccgtgaaggaactcctccagacacgcgtttcattgaggacggtgtgagtgagctg
ctcaagacgcggcgcgtcctaaagtgctcttacccatacggcttcttcctgcagcaaggc
agcacccagaaagagatatttgagctaatgcagactgacctggagatggttgtggaggat
ctggcacagaaggtcaaccgaccgtacttgaggactccttgccacaagataatcagtgca
gcacgtctggtgcagcagaagaggcaggaattcctggcatcagtggcccgaggtgtcgcg
cccaacgattctcctgatcctccccgcagaagttaccctggaggatcatgggactgggag
taccttggctttgcctcccccgagatggggagtcgtcactctgtactgggagcaggagat
caaagagagagacagtctcaggattatgctgacatccagtaccgtcgtagacacagacca
cggcgcagaggagacatgctgagtctgcacaaccttagaagcagcagcaacacaccagaa
acgagtaggaggagtgacaacacagaaaatctagagagaggtgagggccgcagaagagtg
ctgggcttgctggatgaagatgatccaaacatcctgctggccatccagctgtcccttcag
gagtctcgcagagagcgaagcctggagggaggcccagagggagggacagaggggagagtg
gagctggatagaggactggagaggatgcggcgaccctcaggggacccgggtgatgttgct
ttgcagtctctcaacacagacggcccttcaggagccagaggctcctccttccccacttct
ctcctggatcctcctcgcccccctaacaggacagactccacctctcagcctcccatgtca
aactccctccccctcccaccccctcctccctccctcagtgcagagctgctggagctggga
gacagccttatgaaactcgggagcataaccactccttatgacctagacacacacacgcag
gagcagctctgctctcaccacacatacaaccacagtacactcaccgctccctacaccatt
gaacctgcttacagcgacttcagccatagaccagaccagaatgcactgaacactccatat
gtgcttgaccatatcaccattacagatcccagttacagccactccagtagttatttagct
gaggctgaatacactgcttcttgctcacttgaacacacccaaaaccctgcccatactagt
tcatgtaaccgggaacatgcagtcacgtatgacagcaccccaaaaccagacatctcttac
aacccctgccccgaacacagtagctcttacactcaggagcgtcctgccgcctatgctctc
gaacgtccacccaaatcagccccccagccccttgtccagttgtgcctcctgtctccagag
cttgagccagagctgctgctttcaccggtgatccccccagggggccctttcacccccagt
gaccctcagagtctggagcccctagacccaacagccagtgcccagctgctggacaacatc
atggcctggtttaacaacaacattaacccccagaacaacccccagagcctggccctcatc
ccctccccacccaccacagaaactgactcctcccctgacacacacactgagactgagtca
gagagccagacctccagggacatgacccacgcccctctctggcagcccctggagggcgag
ccagaagcagacagagggtcggcgagtccctgtctaggtgcagcgggcttgaagacgtcg
aggcccagcactctggagctagaaaaaagagagaacaacgaggagggtgtggacgcagag
tgtgtgtctgatctgttgctggacgaagcgcacacacacccgtgttcacactcccaacgt
ggaaacagtcctgcacacactgccccagccacagagagagacttggacctcatccttcag
ttagagggagaccaatcacctgatgagtgggaggaacaagtacacctggtgtga
DBGET
integrated database retrieval system
