Cyclopterus lumpus (lumpfish): 117739438
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Entry
117739438 CDS
T09199
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117739438
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117739438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CREPT
CTK3
Motif
Other DBs
NCBI-GeneID:
117739438
NCBI-ProteinID:
XP_034401733
Ensembl:
ENSCLMG00005003296
LinkDB
All DBs
Position
11:complement(10746454..10754804)
Genome browser
AA seq
346 aa
AA seq
DB search
MSAFSEAALEKKLTELSNSQQSVQTLSLWLIHHRKHSRTIVNVWINELKKAQVSRKLTFL
YLANDVIQNSKKKGPEFTQDFAPVIVDAFKHVSRDGEEGCKKQLGRVLSIWQERAVYEIN
LLDQLSQVLYGEKKAKKRPYEEIRPDDEDFASQSSPAEPPQTAELIRALQELENAASGDS
VLRQRISSLPAEVQDTSLLHRITDKESGERLSRLVEEACMLLADYSGRLAAEIDDRRQLT
RTLTVFLQSQKDGLTQNEQKLEVRKSIFFQLLYVSSTSPLCHHYCFSCSSVLCICVLRHL
LNKHFFSCISACCILLLSACHVAELDSRFQTVDLNFIDRPSGEYPD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttttctgaggcagctttagagaagaaactgaccgagctcagcaactcgcag
caaagtgtgcagacgttgtcgttgtggctcattcatcacagaaaacactcgaggactatt
gtcaatgtttggatcaacgaactgaaaaaagctcaggtatcacgcaagctgaccttcctt
tacttggccaatgacgtcattcagaacagcaagaagaaaggaccagaattcacacaggac
tttgcaccggtcatcgttgatgcattcaaacatgtatccagagatggcgaggagggctgt
aagaaacagttgggtcgggttttgtctatctggcaggagagagctgtgtacgagatcaac
ctgctggatcagctctcacaagtcctttatggagagaagaaggctaagaagaggccgtat
gaggagatccgaccagatgatgaggactttgcttcccagagttccccggctgagcctccg
cagacagcagagttaatccgagctcttcaggagctggaaaatgcagcctctggcgactca
gtgctgcgtcagcgcatctcatcccttcctgctgaggtgcaagacacgtcactgcttcac
aggatcacagataaggaatcgggggagcgtctctcccggctggtggaggaggcctgcatg
ttgctagcagactacagtggccgcttggcagcggagatcgacgatagacggcaactcact
cgcacactaacggtcttcctgcaaagccagaaggacggcctgacccagaacgagcagaaa
cttgaagtgcgtaaatcaattttctttcaattactgtacgtctcgtccacctcacctttg
tgtcaccattattgtttctcgtgttcatctgtcttgtgtatctgtgtcctcagacatctt
ttgaataaacatttcttttcatgtatttcagcatgttgcatacttctgctgagtgcctgt
catgttgctgaattagactctcgatttcagactgtagatttaaatttcattgacaggcct
tctggagagtatcctgattag
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