Cyclopterus lumpus (lumpfish): 117739458
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Entry
117739458 CDS
T09199
Symbol
atp6v1c1b
Name
(RefSeq) V-type proton ATPase subunit C 1-B isoform X1
KO
K02148
V-type H+-transporting ATPase subunit C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00190
Oxidative phosphorylation
clum01100
Metabolic pathways
clum04145
Phagosome
clum04150
mTOR signaling pathway
Module
clum_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
117739458 (atp6v1c1b)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117739458 (atp6v1c1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117739458 (atp6v1c1b)
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Gene cluster
GFIT
Motif
Pfam:
V-ATPase_C
Etd1
Folliculin
Motif
Other DBs
NCBI-GeneID:
117739458
NCBI-ProteinID:
XP_034401760
Ensembl:
ENSCLMG00005001565
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Position
11:10179496..10187566
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AA seq
419 aa
AA seq
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MRSCVCSTELHRVDIILKPYAYRDFLTSHITNLSPTAMTEFWLISAPGEKTCQQTWDKLM
VATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDTFVESVVRKVAQYMADVLEDS
RDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKQATQIDNDLKARASAY
NNLKGNLQNLERKNAGSLLTRSLADIVKKEDFVLDSEYLITMLVVVPKISYADWQKTYET
LTDMVVPRSTKLLYEDNDSGLFSVTLFTKAIDDFKHKARENKYTVRDFQYNEEELKADKE
EMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQP
TKKNMKKLREVVYDLYKHLDSSAAIIDAAMDIPGLNLSQQEYYPYVYYKIDCNLLDFKV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagaagctgtgtctgttcaactgaattacaccgcgtggacataattctaaagccatac
gcataccgtgacttcctcacatcacacatcacaaacctttcaccaacagccatgacagaa
ttctggttgatctctgcaccgggggagaagacgtgccagcagacctgggacaagctgatg
gtggccaccacacgcaccaacaacctctccactaacaacaagttcaacatccctgatctc
aaggtcggaacactagatgtgttggtgggtctgtcggatgaactggccaaactagacacc
tttgtggaaagtgtggtgaggaaggtcgcgcagtacatggcagatgtcctggaggacagc
cgagacaaagtccaggagaacctactcgctaatggagttgatctggtcacctatatcacc
aggtttcagtgggacatggctaagtatccaatcaaacagtcgctgaaaaacatctctgag
atcatcgccaagcaagcgactcagatagacaatgacctaaaggccagagcttcagcctac
aacaacctgaagggaaacctgcaaaacttggagaggaagaatgcggggagtttgttgacc
aggagtttggctgacatagtgaagaaagaagattttgtactggactcggagtaccttatt
accatgctggtggttgtcccaaagataagttatgctgactggcagaagacgtatgagacc
ctgacagatatggtcgtgccacgctccacaaagctgctgtatgaggacaacgacagcggt
ctgttcagtgtcactctctttacgaaggctatcgatgacttcaagcacaaggccagagaa
aacaaatatacagtgcgggatttccagtataatgaggaggagttgaaggcagacaaagaa
gagatgacacgtttgtccactgacaagaagaaacagtttgggcctttggtacggtggctg
aaagtgaatttcagcgaagccttcatcgcgtggattcacataaaagcccttcgtgtgttt
gtggaatcagttttgagatatggactgccagtgaacttccaggccatgctgctgcagccc
accaagaagaacatgaagaagctgagagaggtggtctacgacctgtacaaacacctggac
agcagcgctgcaatcattgatgctgctatggacatcccagggctgaacttgagccagcag
gagtactacccctatgtttactacaagatcgactgcaacctgctggacttcaaagtctag
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