Cyclopterus lumpus (lumpfish): 117739526
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Entry
117739526 CDS
T09199
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117739526
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117739526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
117739526
NCBI-ProteinID:
XP_034401871
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All DBs
Position
11:complement(20336956..20359971)
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AA seq
1430 aa
AA seq
DB search
MSEDVPPELLESVREAVGRRVKLTLRRRVQLEVKGDKLENRVLALASHRAFLLTARVPSK
VEHSFNYLDIQGISSNKPTQLLLESERGPWSLRLGSVEEVDEVIAHIGGCLQQICPASSP
VKVMKKLVLKPPERTASLQAAWDEPGSADLGPCGGFSLQYWCVCDHLGLPYREEVQWDVD
TIYLTQDTRELNLQDFIHLENRDLVAIIAALEYNQWFTKLSTKDYKLSTDICDQILRVVS
RSSRLEELVLDNTGLKSDFAQKLASALSYNPASTLHTLNLSNNSLEDKGVSALSAQLAKL
PMGLKHLNLSRTSMSPKGVNSLCQALAANPSVAAALVHLDLSGNSLRGDDLPNLHGFLSH
PNRLETLDLSNSDCSLEQVCASLLRGSLKHLSVFNMSKSVFSHRKCKEVSPSFKQFFSDA
QALSSVSLSGTRLPLEALKALLLGLGCNPNLSDVSLDLSCCELRSGGSQILEGCVAEIPN
ISSLDISDNGLDLDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNVSHVLDNLVHMIQEEE
SPLISLSLADSKLKTDLSIILNALGSNTSLTKLDISGNSMGDMGAKMLAKALQINTKLRT
ILWDRNNISPQGLQDVAAALEKNHTIRFMPVPIMDAAQALKASPEKTEEALLKMEQYLLR
NHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRFTETSSVQEDVKVAENF
MKDARNSKKLLPNLHYLKSAGSSGACVGAIEDKLESMAGEVSRVIDEQLQTMLVSMVDAA
EGLCPHVMKRSSLRQELLKAGAGRMTVPRSFITTTLLEQSGVDIINKISEVKLSMASFLS
DRIVDEILESLSRSQHTLGEHVVRKSRPPLHHEPPMETEVLEETVLQPEKRDQEQKQSRT
RDQKPGLQDLDGCIMTPKSKRKSILVRMLRPVSVAFEMEFDLDKALEEVPIHVEDLPPAP
AQPLDRGSVPQGDLPPPPPPLDAKPVCLGELPPVEHKLLEHHTKLRPKPKKRTRPSRPAR
KAAGSTPPEAEQNSIMGKLDEGLDDFFSKKVIKLSFKLPSVRGPSSSSQEAADKKRDSRK
SGFFNLIKSRTSRSEKSHGAASITPLHPAASSTSSTSSASPSPSVAPVAEETPPTSPTPP
ARNPVSVAEPHQELHRAQSWDHTDSETETSPTADEPSEEETVEKKENPHILRHIGVPVMG
MDLLAEMKARQGRMAVKKAESSSLLDNDKDKSDVHLVVPVDADESKPEPTPRSKPPSVTP
KPAPPQAIKPPLGPRTSVPLSPASPTSPGPSSTYTFDESAEAPAGGSSAKGPLPAPRLKR
APSEQERESTSSNSAGPLSPLDGEFPADGDAFEPPSPALDPGAGGRQWSSLKSSAGPLAA
SRDRDQEERAKSLPAYVRPPSLTDTDPRPAEEDVPSPVADLKSDDESGDV
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggacgttccccccgagctgttggagagcgtgcgggaggcggtgggccggagg
gtgaagctgaccctgagacgcagagtccagctggaggtcaaaggtgacaagctggagaac
cgagtgctggcgctggcgtcccatcgggccttcctgctgacggctcgggtcccctccaag
gtggagcactccttcaactacctggatatccagggaatcagcagcaacaagcccactcag
ctgctgttggagagcgagcgcggtccatggagcctccgcctcggctcggtggaggaagtg
gacgaggtcatcgctcacatcggcggctgcctgcagcagatctgccccgccagctcacct
gtcaaggtgatgaagaagctggtcctgaagcccccggagaggacggcgtccctgcaggcc
gcctgggacgagccgggctccgcggacctggggccgtgcggaggcttttctctccagtac
tggtgtgtgtgtgaccacctgggtctgccctaccgggaggaggtccaatgggacgtggac
accatctatctgactcaggacacccgagagctcaacctgcaggacttcatccacctggag
aacagggatctggtggcgatcatcgcagctctggagtacaaccagtggttcactaaactc
tccaccaaggactacaaactgtcgactgatatttgtgaccagatcttaagagtggtgtct
cggtccagccggctggaggagctggtgctggacaacaccgggctcaaaagtgattttgct
cagaagctggccagcgcgctgtcgtacaacccggcctccacgctgcacacactcaacctg
agcaacaactcactggaggacaaaggcgtttccgctctgagtgctcagctcgccaaactt
cccatgggcctgaagcacctgaacctctccaggacctccatgtcccctaaaggtgtgaac
agcctctgccaggcgctcgccgccaacccgtcggtcgccgccgccctcgtgcacctcgac
ctgtcgggaaactcgctccgaggcgacgacctgccgaacctgcacggcttcctgagtcac
ccgaaccgcctggagactctggacctgtccaacagcgactgctccctggagcaggtgtgt
gcctctctgctcagaggatctttgaagcatctctccgtcttcaacatgtcgaagtcggtc
ttctctcacaggaagtgtaaagaagtctctccgtccttcaagcagttcttcagcgacgct
caggctctgagctccgtcagcctgtcgggaacccggctgcctctcgaggctctgaaggct
ttgctgctcggactcggctgcaacccgaacctcagcgacgtgtctctggatctcagctgc
tgcgagctgcgttctggaggctcccagatcctggagggttgtgtggcggagatccccaac
atctccagtctggacatttctgacaacggtctggacttggacctgaccaccctgctggtc
tggctggctaagaaccgctccatcagacacctgtcgctgggcaagaacttcaacaacatc
aagtccaaaaatgtgtctcatgttctggacaacctggttcacatgatccaagaggaggaa
tcgccgctgatctcgctgtccctggctgactccaagctgaagaccgacctgtccatcatc
ctcaacgccctgggcagcaacacctctctgaccaaattggacatcagcggaaactccatg
ggagacatgggggccaagatgctggccaaagccctgcagatcaacaccaaactcaggaca
atcctgtgggataggaacaacatcagccctcagggcctgcaggacgtcgctgctgctttg
gagaagaaccacaccattcgtttcatgcctgttcccatcatggacgctgctcaggcactg
aaggcgagcccagagaagacggaggaggccctgctcaagatggagcagtacctgctgagg
aaccacgagacccgcaaatacctccaggagcaggcgtacaggctgcagcagggaatagtc
accaccaccacgcaacagatgatggacatgatttgtgtcaaggtgcaggaccacctgaac
tctctgaggttcacagagaccagctcggtccaggaggacgtgaaggtggccgagaacttc
atgaaagacgccaggaactccaagaaactgctccccaacctgcactacctgaagagtgcc
gggtccagcggagcgtgcgtcggagccatcgaggacaagctggagtcgatggccggtgag
gtctcccgggtcatcgacgagcagctgcagacaatgctggtgtccatggtggacgccgcc
gagggcctgtgtccccacgtgatgaagaggagcagccttcgccaggagctgctgaaggcc
ggagccgggaggatgaccgtccctcgcagcttcatcaccaccacgctgctggagcagtcc
ggggtggacatcatcaacaagatcagcgaagtgaagctgagcatggcgtcgtttctttcc
gatcgcatcgtggacgagatcctggagtctctgtcccgatcacagcatactctgggcgaa
cacgtggtccgtaagagtcggcctccgctgcaccacgagcccccgatggagacggaggtt
ctggaagagacggtcctgcagccggagaaacgcgaccaggagcagaagcaaagccggacc
cgggaccagaagcccgggctgcaggatttggacggctgcattatgactcctaaatccaag
aggaagagtatcctggtgaggatgctgcgacccgtctctgtggcgttcgagatggagttt
gacctggacaaggctctggaggaggttcccatccacgtggaggaccttcctcctgcgccg
gcacagccattggacagagggtcagtcccccagggagacctcccccctccccctcctcca
ctggacgcgaagccggtctgtttgggcgagctgccgcctgtggagcacaagctgctggag
caccacaccaaactccgaccgaaacccaagaagaggaccagaccgagccgaccagcccgg
aaagccgccggctcgacgccaccggaggccgagcagaacagcatcatgggaaagctggat
gagggcctggatgacttcttctccaagaaagtcattaaactcagcttcaaacttccctct
gtgagaggtccgtcctccagctcgcaggaagcagcagataagaaacgcgactccagaaag
agcggtttcttcaacctcatcaagtcccggacatcccgctcggagaagagccacggagcc
gcctccatcactccactccaccccgccgcctcctccacctcctccacctcctctgcttca
ccatctccctctgttgccccagtggctgaggaaacgccgccgacatcccccactcctcct
gcgagaaaccccgtttctgtggcggagccccatcaggagctccacagggctcaatcctgg
gaccacacggattctgaaacggagacctcgccgaccgctgacgaaccttctgaggaggag
accgtggagaagaaggagaacccccacattctccgccatattggggtccctgtgatgggc
atggacctgctggctgagatgaaggccagacagggcagaatggctgtaaagaaagctgag
tcgtcatccttactggacaatgataaagacaagtcggacgtccatctcgtggtcccagtg
gacgctgatgagtccaaaccggagccgactcccaggtcaaaaccgcccagcgtcaccccc
aaaccggccccaccccaggccatcaaacctccgctcgggccccggacttctgtgcccctc
agccctgccagtccgaccagccccgggccgagcagcacctacaccttcgatgagtctgct
gaggctccagcaggcggctcctctgccaaaggaccacttcctgctcctcgcctgaagagg
gcgccgtcggagcaggagagagagagcaccagcagcaactctgcaggacccctttctcct
ctggacggcgagtttcctgcggacggcgacgcgttcgagccgccgagcccggcgttggat
cccggcgccggtggccgtcagtggtcgtccctaaagagctccgccggtcctctcgctgcg
agccgggaccgggaccaggaggagcgagccaagtccctccccgcctacgtgaggcctcca
tctctgaccgacacagatcccagaccagctgaggaggacgttccgtctccggtcgctgat
ctcaagtcagacgacgagtccggtgacgtctga
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