Cyclopterus lumpus (lumpfish): 117739544
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Entry
117739544 CDS
T09199
Name
(RefSeq) gasdermin-E-like
KO
K22146
gasdermin-E
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117739544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117739544
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117739544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
DUF6279
Motif
Other DBs
NCBI-GeneID:
117739544
NCBI-ProteinID:
XP_034401904
Ensembl:
ENSCLMG00005020357
UniProt:
A0A8C3ALJ1
LinkDB
All DBs
Position
11:13322267..13328644
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AA seq
481 aa
AA seq
DB search
MFSKATANFVRQIDPEGSLIHVSRVNDSKKLVPMALVVKRNRIWFWQSPKYQPTDFTLND
LLQGDKVLGPDVSETEFLTYKGTFRDKLSGKLDTEAGSASATLEALGSSRLQSCFGKLKK
EDLDVKKLLQDSSSRLVDMQNPLVQQLEKRADVLAVVKERILTTNSCSITQTKKEQCIFQ
GMLGLLGMLGNSVKVCAKDSNNIEVDSDVSLEIPSGTVIAYSILELEIKKNGHYDICLQP
GTIGGIEADSPVPWPSHDSLDTVDEGCNGKMVPLKVALSALPNGSQEMDLSPLAELSQAA
RCALFKRLQEALRDRTALSYMECLLEELCSGETLDIDKYEELSESQRKALSALLDNHAED
SQCHLPACLDAAHLLVSAMEALPDQTLSLLSESRLDFLEAFDTLMCRLKKSSEPLSIQCL
PVPLQDNQVFQLAEQLLSSTNVTLKRDSHRLWAETGNEAGALPLVLCLSIQGLSLLCKEL
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaagccaccgccaacttcgtccgtcagattgaccctgaaggaagcctcatc
cacgtgtcccgagtaaatgactcaaaaaaactggttcccatggcgctggtcgtcaaacgc
aaccgcatctggttctggcagagtcccaagtaccagccgaccgacttcacactcaacgac
ttgttgcaaggcgacaaggtgctcggccctgatgtgtccgagacagaattcctgacctac
aaggggacgtttcgagacaaactctctgggaagctggacacagaggccggctctgccagc
gccaccctggaggcgctgggctcttccaggctccagtcatgttttggcaagctgaagaaa
gaggacctggatgtgaagaagctgttacaagactccagcagcaggctggtggacatgcag
aatccgctggtgcagcagctggagaagcgagctgacgtgctggcggtggtgaaggagagg
atcctgaccaccaactcctgctccatcacccagaccaaaaaggagcagtgcatcttccag
gggatgctcgggctgctgggcatgctggggaactctgtgaaggtgtgtgcgaaggacagc
aacaacattgaggtggacagcgatgtttccttggagattccctccggtacagtcattgct
tacagcatcctggaactggagattaaaaagaatggccactatgatatatgcctacaacct
ggcacaataggaggcattgaggccgactcaccggtaccctggccatcccatgattccttg
gatacggtggacgaagggtgcaatgggaagatggttccattgaaagtagctttgagtgca
ctgccaaatggatcccaggagatggacctctctcctctggcagagctctcccaggcagct
cgctgtgccttgttcaagagactccaagaggctctgcgggacagaactgctctgtcttat
atggagtgtttgctggaagagttgtgcagtggtgaaacactggatatagacaagtatgaa
gaactgtcggagagtcagagaaaagcattgtcggccctactggacaaccacgccgaagac
agccagtgtcatctcccggcctgcctcgacgcagctcacctgctggtcagtgccatggaa
gcgctgcctgatcaaactctgagcctcctgagtgagagtcgtctggattttctggaggcc
ttcgacacactgatgtgcaggttgaagaagagcagcgagcctctctccatccagtgtctt
ccggtcccgctgcaggacaaccaggtcttccaactggcagagcagctgctcagctccacc
aatgtgacactaaagagagacagccacaggctgtgggcggagacaggaaatgaagcagga
gctctcccattggtcctctgcctcagcatccagggattgtccctgctgtgcaaagagcta
aagtag
DBGET
integrated database retrieval system
