Cyclopterus lumpus (lumpfish): 117739554
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Entry
117739554 CDS
T09199
Symbol
gpnmb
Name
(RefSeq) protein QNR-71 isoform X1
KO
K20732
transmembrane glycoprotein NMB
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117739554 (gpnmb)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Phagocytosis
Others
117739554 (gpnmb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PMEL_NMB_N
PKAT_KLD
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117739554
NCBI-ProteinID:
XP_034401921
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Position
11:complement(12733758..12740227)
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AA seq
631 aa
AA seq
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MEALRYVFLLICACFICQADGRKTYGDMFPHKHVMPGKSPYPIPPIPGWDPDTNPWDDYL
YPPLNPKPKELMHHKGKPKVHLTSDSPALNGSNISFTAKLEYPPCQKEDANGDIVWDEHC
EDGTELEASANGQVRSGDVYNLYNDYGFGKCTDMKKCNVFPDGKPFPQSSDWSRKSYVYV
WHAMGQYFETCDGSSSSLTINTTNIPLGAEVIEVMVYKKRERRKYSPLTTDNTIFYVTDK
IPVAVSISQKAAVNQSENVFFRGEDVVFKVQLHDPSGYLKTAAAIDYIWDFRDGNQLVTH
RNVTTHAYSTLGSMNVKLVVEAAFPVQCPPTSATPTQWSATSSAPTEAPTPPLPGTHSMT
VKMETTQVPPSTSQPLPSSSSSPTAVTTGLPTTEPLSPTVANATPGSNPTTLAWLRTRNL
NGNECYRYAFGTFMGNITIVEPKHKLTSQSNSRIEDVSVARVTNTDINFLVKCMGNIPTS
ACTIVSDPTCTQVRSIVCDDVPPSSECEVHLRRTFPEPGTYCINITLENSRSLTRTSTTV
TINKSQDTPVSMTSHTVEVVLSSTAVLVAIFAFVAYLVCKRYKVYRPIRKSLLEDASGGH
AGAGGRMVRLREALFPASEESHYLLTERRPV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaagccctgcgatacgtttttctcctgatttgtgcctgctttatttgtcaagctgat
ggacgcaaaacatacggtgacatgttcccccacaagcatgtaatgcctgggaagtcacca
tatccgattccaccaatccctggctgggatccagacaccaacccatgggatgactacctc
taccctccactaaacccaaagccaaaagaactcatgcaccacaaaggtaaacccaaggtt
catctgaccagcgacagtccggctctcaatggctctaacatctccttcaccgcgaagctg
gagtaccctccatgccagaaggaagatgccaacggggacattgtttgggatgagcactgt
gaggacggtacggagctcgaggcctcagccaacggacaagtgcgttctggcgacgtgtac
aacttgtacaacgactatggctttggaaagtgtacggacatgaaaaaatgcaacgtgttc
cccgatgggaagcccttccctcagagcagcgactggagccgcaagagctacgtttacgtg
tggcacgcaatgggccagtattttgagacatgcgacggttcctcctccagtttgaccatc
aacaccaccaacatccctctgggtgcagaggtcatagaggtcatggtctacaagaaacgt
gagcgcaggaagtatagccccctcaccactgacaacaccatcttctacgtcacagataag
atcccagttgcagttagcatctcccagaaggctgcggtcaaccagtctgagaatgttttc
tttcgtggtgaggacgtggttttcaaagtccagctccatgaccccagcggttacctcaaa
accgcagccgccattgactacatctgggacttccgagatggcaaccagctggtgacacac
cgcaacgtgaccacacacgcctacagcacgctggggagcatgaacgtgaagctggtagta
gaggcagcgttccctgtgcagtgtccgcccacctctgccaccccgactcagtggagcgcc
acatcatcagcccccacagaggctcccacacctccacttcctggtactcattccatgacc
gtcaagatggagacaacccaggtgccacccagcaccagccagccccttccatcctcctcc
tcctctcctactgccgtgacaacaggcctgcccaccacggagcccctctcccctactgtt
gccaatgcgaccccagggtcgaaccccacaaccctggcctggctccgcaccagaaacctc
aacggcaacgagtgctaccgctacgcctttgggaccttcatgggaaacatcaccattgtt
gagcccaagcacaaactgaccagccagtcgaacagtcgcattgaggatgtgtcagttgcc
agagtgaccaacactgacatcaacttcctggtgaaatgtatgggcaacatccccacttca
gcctgtaccatcgtgtcagaccccacctgtacacaggtgcgcagcattgtgtgcgatgac
gtgccgccatcgtcagagtgtgaagtccatctcaggcgaacttttccggagccaggcacc
tactgcatcaacatcaccctggaaaactccaggagcctgaccagaaccagcaccactgtc
accatcaacaagtcccaggatacacctgtgtccatgacttcacacactgtggaggtggtg
ctgtcctcgaccgctgtgttggtggccatctttgcattcgttgcctatctggtctgcaag
cgttacaaggtgtaccgtcccattcgtaagtccctattggaggatgccagcggcggccat
gctggggccgggggacgcatggtccgtttgagggaggcactcttccccgccagcgaggag
agccattacctgctgacagagagacgccctgtgtag
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