KEGG   Cyclopterus lumpus (lumpfish): 117739555
Entry
117739555         CDS       T09199                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117739555 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117739555 (sf3b4)
Spliceosome [BR:clum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117739555 (sf3b4)
 Complex B
    117739555 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    117739555 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 117739555
NCBI-ProteinID: XP_034401924
Ensembl: ENSCLMG00005002278
UniProt: A0A8C2WH74
LinkDB
Position
11:complement(9008788..9012862)
AA seq 393 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPASAPTPVLTAMGSGMPMPGMPPP
GFPPIPPPGSMPPSMSMSHNANQQGGGGGPPPGPPPFPGNMHPGMSQMPMPPPGPPGMVP
PPPAPPGSNQSRAPLPPGMPPPPPMGMPPRAPYGPHMGHPGPPGMRGPPPMPPPGYGAGL
PPRPPFGFQRGPPMPPRPPGVPPRVPMRAPMPP
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcagagagaaaccaagacgccactgtgtatgttggtggcttg
gatgagaaagtgtcagagccattactatgggagcttttcctgcaggctggtcctgtggtc
aacacacacatgcccaaagacagggtcactggtcaacatcaaggttatggctttgtggag
ttccttagtgaagaagatgctgactatgcaatcaaaatcatgaatatgataaagctctat
ggcaaacccattcgagttaataaggcctctgcgcacaacaaaaacctggatgtgggcgca
aacatcttcattggtaatctggatccggagattgatgagaaactgctctatgacacattc
agtgcctttggcgtgatcctccagacgccaaagattatgcgagacccagacacaggcaac
tccaagggttatgcttttatcaattttgcaagttttgacgcatctgatgcagcaattgag
gccatgaacggccagtacctctgtaacaggcccatcacagtatcctacgccttcaagaaa
gactccaaaggagaacgacatggctctgctgcagagcgcctcctggctgcacaaaaccct
ctttcacaggcagacaggccacatcagctgtttgcagatgctccaccgcctgctagtgct
cctacgccggttctaactgcaatgggaagtgggatgcccatgccaggcatgccacctcca
ggtttccctcctattcctcctcctggatcgatgcctccatcaatgtccatgtctcataat
gcaaaccaacagggcggtggcggtgggcctccacccggaccaccacccttcccgggcaac
atgcatccaggtatgtctcagatgcccatgccccctcctggtcctcctggcatggtgcct
ccacctcctgctcccccgggatcaaatcaatcgcgggcaccactaccacctggcatgccg
ccacccccacctatgggcatgccgcccagagccccgtacggacctcacatgggtcaccct
gggcctccaggtatgagagggcctcctccaatgcctccacctggctacggtgctggcctt
cctcctcgtcctccttttggcttccagagaggaccgccaatgcctccaaggccccctggt
gtcccaccccgcgttcctatgagagcaccaatgccaccataa

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