KEGG   Cyclopterus lumpus (lumpfish): 117739563
Entry
117739563         CDS       T09199                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117739563 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117739563 (polr1f)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     117739563 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N SSRP1_C DUF7464
Other DBs
NCBI-GeneID: 117739563
NCBI-ProteinID: XP_034401938
Ensembl: ENSCLMG00005004608
UniProt: A0A8C2WUV9
LinkDB
Position
11:12010109..12013697
AA seq 360 aa
MANLEHAEDHPKHVNMSRETPGRDADVVSCAIPSFAAASELLSAPYSCLVMNAHRRHVTL
PPMYLNKKRTGIQEELEAELLRFSQSLKGVPLAYENIRIVGPHGNIYDDSGYIHMDVEAN
FIVFQPEKGQKLLGKVNKLGMSHVGCLVHGCFNASIPKPSLVSVNTWWAAGPRIGAEMEF
DVTALDADTAGVLLIRGQLDRTRVQELLAIGESLESGVPADQPEPPETEPTEESPVDTPK
KKKKKRDKVKEERDEVTSTPSCQVDGSTTSELNGTITEANVNGAGEKKKKKKRKHVKEEE
EEEEEEEEEVAISTMEVHGSDSSGYLSDKPSKKRKHETASAVASSFSNVPEPPKSKKKRK
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggcgaacctcgagcatgcagaagaccacccaaaacatgtgaacatgtcccgtgaaaca
ccgggcagagacgcggacgtcgtctcgtgcgccatcccgtcgttcgcagccgcctccgag
ctgctgtcagcgccgtactcgtgtctggtcatgaacgcgcaccggagacacgtcaccctg
ccccccatgtacctgaataagaagaggaccggtatacaggaggagctggaagccgagctg
ctccggttctcccaaagtctaaagggagtccccctggcttatgaaaacatcaggatagtg
ggtccccatggaaacatctacgacgacagcggctacatccacatggacgtagaggccaac
tttattgtctttcagcccgaaaaaggacagaaactgctgggtaaagtgaataaactagga
atgagccatgtgggctgcctggtgcacggctgcttcaacgccagcatccccaaacccagc
ctggtttctgtgaacacctggtgggctgcagggccgagaatcggagcggagatggagttt
gatgtgactgctctcgacgctgacactgcaggggtgctgctgatcagagggcagctggac
aggaccagggtacaagagctgctggctattggtgagagcttagagtcgggcgtccctgca
gaccagccagaaccaccagagacagaacccaccgaggagtctcctgtagacacccccaag
aagaagaaaaagaagagagacaaagtcaaggaggagagagatgaggtgacaagtacacct
tcctgccaagtggatggcagcacaacatcagagctgaatggaacaatcactgaagcaaat
gtcaatggagctggagagaagaagaaaaagaagaagagaaaacatgtgaaagaagaggag
gaggaggaggaggaggaggaggaggaggttgcaatctctaccatggaggtccacggcagt
gactccagcggttaccttagtgacaagccaagcaaaaagaggaaacatgaaactgcttca
gctgttgcatctagttttagtaatgttcctgaaccaccaaagtccaagaagaagagaaag
tga

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