KEGG   Cyclopterus lumpus (lumpfish): 117739575
Entry
117739575         CDS       T09199                                 
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
  KO
K23455  collagen type VIII alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
SSDB
Motif
Pfam: Collagen C1q PA14
Other DBs
NCBI-GeneID: 117739575
NCBI-ProteinID: XP_034401950
Ensembl: ENSCLMG00005020362
UniProt: A0A8C3ALS7
LinkDB
Position
11:13486874..13496536
AA seq 688 aa
MLVTMLLAPACVLLMLGARALAGGYPPVAHMKYMQPMMKGPIGPPFREGKGHYVDMPPMM
EVKGEPGPQGKPGIRGPTGPEGIPGKPGLGKPGLNGQPGSQGPPGFPGIGKPGLPGLPGK
IGPKGMNGLNGEVGPRGEPGSRGSSGQPGLPGPAGLSLNGKPGLPGMRGPSGSRGEPGGK
GLSGPPGERGFRGENGNGKPGPSGIRGPPGLKGTSGPPGLPGIGKPGLKGLSGLPGLKGD
QGLPGEQGEPGEAGAPGLQGLPGPVGLGKPGQDGLPGGLGSQGPKGEAGLRGSPGFPGTP
GYGKPGLSGPKGDKGYGGLPGLPGDKGGQGMLGPIGETGLDGQSGPPGLQGPMGLPGKHG
MSGQKGELGPQGPPGLPGLRGDQGPTGSFGKPGIPGEKGILGPNGPVGKPGPKGDAGHIG
LPGNPGLTGVSGPKGEAGFIGTPGPRGQSGIPGLQGPMGPMGPQGGPGQKGESGLPGPAG
LGKFGEKGTIGPQGPPGKAGPSGLNGNHGAPGPPGPPGPPGNGQTVVAGATDSQLEGDEV
PGDRKGPAYSQVPLSASVAPAFTAILTTPFPPSAMPIKFDRTLYNGQNAYSSATGMFTAP
LSGVYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQVWV
QMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgctggtgaccatgctgttggctcctgcctgtgtgctactgatgctgggagcgcgggct
cttgctggaggctatccccccgtggcccacatgaagtacatgcagcccatgatgaaaggg
cctataggacccccgttcagagaaggaaagggacattacgttgatatgccacccatgatg
gaagtcaagggggaaccaggcccccaaggcaaacctggaattagaggccccaccgggcct
gaaggaattccaggcaaacctggactgggcaagccaggtctcaatggccagccaggctct
caaggacctcctggttttccaggaattggtaaacccggacttccaggactcccaggaaaa
attggtccaaagggaatgaatgggcttaatggcgaggttggccctcgtggtgaaccaggt
tccagaggttcttcagggcagcccggcctccctggcccagctggcttgtctctaaatggg
aaacctggacttccaggcatgagaggcccctctggctctcggggtgaaccgggaggaaag
ggcctttctggcccaccaggtgaacgtgggtttaggggcgagaatggaaatggaaagcca
gggccttcaggtataaggggtcctcctgggctgaaaggcacttcaggacctcctggtctt
ccaggtataggcaaaccaggcttaaaaggtttgtctggactgcctggtcttaaaggtgat
caaggactcccaggggaacaaggagaacctggagaggctggggctccaggtctacaaggt
ctgccaggaccagttgggttagggaagcctgggcaagacggactgcctggaggactaggt
tcacaaggtccaaaaggtgaggcagggcttaggggttctcctggatttcctggcactcct
ggttatggaaaacctggtctgagtggacctaaaggagacaagggctatggtgggttgcct
ggtctcccaggggacaaaggagggcaaggaatgttgggcccaattggggaaacaggcctt
gatgggcaatcaggaccaccaggacttcaagggccaatgggactccctggaaaacatgga
atgtcaggacagaagggagagctggggccccaaggccctccaggacttcctggcctcaga
ggcgaccaaggccccactggatcctttggaaaacctggcatacctggggagaaagggatt
cttggacctaacggtcctgttggaaaacctggacccaaaggtgatgcagggcatattggc
ctacctggaaatccaggactgacaggtgtttcagggcctaaaggtgaggcagggtttata
ggaactccaggacccagggggcagtcaggaattcctggtctacagggtcccatggggccc
atggggccacagggtggccctggccaaaagggtgaatccggacttccagggcctgcagga
ctgggtaagtttggagagaagggaactataggtccccagggtcctccaggaaaagcaggc
ccttctgggcttaatggtaaccacggcgctcctggtcctccagggccccccggtcctcca
ggaaatggccaaacagttgttgcaggggcaactgattcgcagttggaaggggatgaagta
ccaggagaccggaaagggcctgcatacagtcaagtcccactctctgcctctgtggcaccg
gccttcacggccatcctcaccacacctttccctccctctgccatgccaatcaaatttgac
agaaccctgtacaacgggcaaaatgcctacagctctgctactggcatgttcactgctcct
ttatctggtgtctactactttgcataccacatgcatgtcaagggaacaagcctgtgggtg
gcactgtacaagaacaatgtgccagctacttacacctatgatgaatacaagaaaggctac
atggaccaggcgtccggtagtgctgtcctagagctgaaggagggtgaccaggtctgggtc
cagatgccctcggatcaggcaaatggcctctattctaccgaatacattcactcctccttc
tcaggatttctgctctgtcccacataa

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