Cyclopterus lumpus (lumpfish): 117740057
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Entry
117740057 CDS
T09199
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740057 (lrsam1)
04121 Ubiquitin system [BR:
clum04121
]
117740057 (lrsam1)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117740057 (lrsam1)
Membrane trafficking [BR:
clum04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
117740057 (lrsam1)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117740057 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
zf-C3HC4_3
LRR_1
SAM_2
Prok-RING_4
SAM_1
LRR_LRWD1
zf-RING_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
117740057
NCBI-ProteinID:
XP_034402087
Ensembl:
ENSCLMG00005020684
UniProt:
A0A8C3AM22
LinkDB
All DBs
Position
12:18593879..18624126
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AA seq
734 aa
AA seq
DB search
MPLFFRKRKPSEDSQKRLEYQLCRSKEAGADDILDISACEVSEVPSSAFSICKVLQKKVL
ILHNNELRSLLPKGCDIRTLATLKVLDLHENKLTSLPEDIGKMASLQILNVEKNRLKDLP
QSIGDLRLLQTLNLKGNCLSELPSSIGSLSSLRTLDLSDNNIVQLPKALVYIRTLESFTL
DADMMSYPPAAVCTDGTESIQRFLCTELGEEYCPPSQYLLPVLENECGKQNSDCLDGLEE
AWQNKFSDYEKRKEQKQQAKLAFEWHLEEKKKEHTQLILMNTSRKENILHSVRQEQERLE
LGVSQQQRAQEAERLLVLEKVRQAEDSISSRISNMLMDKIRQKKTAEFLQAMEEDRIRME
HLTAITQEEAISLKKKEVAVAMQKMLSDGCAMDLLQEASDFRRENLVSEAYRSMENMDRK
FDKMLSLQVLDKSKAIAHILQEEEMQKAAFQALQLQKDAVHGYIRNQIKRIESELMQLTR
LEIKRRNLDAENLQEVLVEQRTALSDLLQQLLKQRDQREQELRQVLAEMELKSESNQQNY
WMIQYQRLLDAKPLSLRMQEAGLEKELVNLICKLSAQHYLPILAHHRLTTEALYHMTSSD
LKKIGINEIGIQNALLNWALERYPEGAFKVVPQDEEAEVASTAMSPCSPQVLPSTSTFQI
PSPPLTPGTPVTPSAPSPVEGPGSSECVVCMETGSQVIFLPCGHVCCCQFCSGALQNCPL
CRSNISQHVRLYHS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttcagaaagaggaaaccaagcgaggactcccagaagagactggaatat
cagctgtgcaggtctaaggaggccggtgctgatgacatcctcgacatctcagcttgtgag
gtctcagaggttccctccagtgccttttccatttgcaaggtgcttcaaaagaaggttctc
atcctccataacaatgagctgaggtcattgctgcccaaaggatgtgacatccgcactctt
gccactttaaaggttttggatctgcatgagaacaagctcacttcactcccagaagacatt
gggaagatggcatcactgcagattttgaatgtggagaagaaccgcctaaaggacctgcca
caatccatcggggatttgcggcttctgcagacactcaatttaaagggtaactgtctcagt
gagctgccatcctcgattggttctttgagcagcctgcgtaccctggacctgagtgacaac
aacatcgtccagctccctaaagctctggtctatatacgcaccctagagagctttaccctt
gatgctgatatgatgtcctacccgcctgcggctgtgtgtacagacggcacagagagcatc
cagcgcttcctatgcaccgagctgggagaggagtactgccctccatcccaatatctcctg
ccggtgctagagaatgagtgtggcaaacagaactctgactgtttggatggcctggaggag
gcgtggcagaacaaattcagtgactacgagaagagaaaggagcagaagcagcaggcaaag
ctggccttcgagtggcaccttgaggagaagaaaaaagagcacacccagctcatactcatg
aacacctcacgcaaggaaaacattctccactcagtccgacaggagcaggagcgtctggag
ctgggggtcagccagcagcagagagctcaggaggcagagaggctgctggtgctggagaaa
gtccgacaagctgaagacagcatcagcagtcgcatcagcaacatgctgatggacaaaatc
aggcagaaaaaaactgcagagtttcttcaagccatggaagaagatcgaatccgcatggag
catctgactgccatcacacaggaagaagccatttcactgaagaagaaggaagtggccgtg
gccatgcagaagatgctgtcagacggctgtgctatggaccttctccaggaggccagtgac
tttcgcagagagaacctggtgtctgaggcttacagaagtatggagaatatggacaggaag
tttgataaaatgctgtccctccaagttttggacaaatctaaagctattgcccacatctta
caggaggaggagatgcagaaagcagcgttccaggccctgcagctgcagaaagacgctgta
cacggctacatccgcaaccagatcaagcgcatagagagtgaattaatgcagctgactaga
ttggagattaaaagacgcaatctggatgctgagaacttgcaggaggttctggtggagcag
cgaacagctctcagtgatttgttgcagcagctgctgaagcagagagaccagagagagcag
gagctgcggcaggttctggcagagatggagctgaagtcggagtccaaccagcagaactac
tggatgattcagtaccagagactgttggatgccaaacccctgtcactgcgcatgcaggaa
gcaggcctggagaaagagttggtcaacctgatatgcaaactgtcagctcagcactacctg
cctatcctggctcatcatcgactgacaactgaggccctttaccacatgacctcctctgac
ctcaagaagattggcattaatgaaataggaatccaaaatgctcttctgaactgggctctg
gaacgctaccctgaaggagcttttaaggttgttccgcaggacgaggaggcggaggtcgcc
tccactgctatgtctccttgctcccctcaggtgcttcccagcacctccacctttcagatc
cccagcccaccactcaccccagggacccccgtcaccccctcagccccgagccctgtggag
ggaccagggagctcagagtgtgtggtctgcatggagactgggtctcaggtcatcttcctg
ccctgtggtcatgtatgctgttgtcagttctgcagcggcgctctgcagaactgccctctg
tgtcgtagcaacatatcccagcatgtacgcctttaccatagctag
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