Cyclopterus lumpus (lumpfish): 117740107
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Entry
117740107 CDS
T09199
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117740107 (rfx3)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Other basic domains
RF-X
117740107 (rfx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
117740107
NCBI-ProteinID:
XP_034402176
Ensembl:
ENSCLMG00005013930
LinkDB
All DBs
Position
12:complement(9615617..9632024)
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AA seq
766 aa
AA seq
DB search
MLRAYCAMQTPETGADSTSTVPLQTTVPVQPTGSTQQGPVQQQAQTVQQVQHVYPAQVQY
VEENSSVYTNGNIRTYSYSEPQLYSQNSGGNYFDTQSSSSQVSTVVTSHGMTNNGGGGSG
GMSMNLAGGQVISTSPGAYIMDNAAPHPVSQTARASPATIEMAIETLQKSEGLSSQRSSL
LNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTR
RLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKFDGCSGENY
SSGGQHLPGAEEQTVIAQSQHHQQFLDASRALPDFVELDLGPSNTENISPEDVKALQSLY
REHCEAILDVVVNLQFSLIEKLWQTFWRYSPPDSVEGATLTENSSLSEIEARLPRSQLLE
LCRNETVLKWMSTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNAI
PQRMIQTKIAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQ
ASWVCQCEEGVVQHLEQDFKATLQQQSSLEQWAAWLENVVTQVLKPYEHRSSFPRAARQF
LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIGVMGEF
DSLNTLSLSNMDRDETSGMDSDLDDDIEETGEPLAKREKSEHEVIQVIQVGALEDGSHPV
VGVVQPGVLHSLPQPQQDHTEHILTPSAATPTIRHCSATGNTYASV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggcatattgcgccatgcagacccctgagacaggcgctgactccacctccaca
gtccctcttcagaccaccgtgcctgtccagcctaccggctccacccagcaggggcctgtc
cagcaacaggcccagactgttcaacaggttcagcatgtttacccagcacaggtgcagtat
gtggaggaaaacagtagcgtctacactaatggcaacataagaacctactcgtactcagag
ccgcagctgtacagccagaacagtggcgggaactactttgacacgcagagcagctcatca
caagtttccactgtggtgacatctcatggcatgaccaacaatggaggagggggcagtgga
ggaatgagcatgaatctggcagggggtcaggtaatcagcaccagtcctggggcttacatc
atggacaacgctgcaccccaccctgtcagccagacggcacgagcctccccggccacaatt
gaaatggcgattgagactcttcaaaaatctgagggtttatccagtcagagaagctcgctg
ctcaacagccatctccagtggctgttggacaattatgagacagcagagggcgtaagtcta
ccacgatccaccctctacaatcattacctgcgccactgccaggagcagaaactggaccct
gtaaatgcagcctcttttggtaaacttatccgctccatcttcatgggactccgtacaagg
cgcctagggacaagagggaactccaaataccattactatggtatacgtgtgaaaccagac
tcgccactcaatagactccaagaagacatgcagtatatggcactcagacagcaacctgtt
cagcaaaaacagaggttcaagccggtgcagaagtttgatggctgctccggggagaattac
tcaagtggaggccagcaccttcctggtgcagaagagcagacagtcattgcacagagtcaa
caccaccagcagttccttgatgcgtcgcgggcactccctgactttgtagagctggacctg
ggaccgagcaatacagagaacatcagcccagaggatgtgaaagctctccagtccctttac
agagagcactgtgaggctatcctggatgtggttgtcaacctccagttcagtctaattgag
aagttgtggcagacattttggcgttattctccccctgactctgtagagggtgccactcta
acagaaaacagcagcttaagtgagattgaagcacggcttccccgttcacagctactggaa
ctgtgcaggaacgagactgtgctcaaatggatgagtacctgtgaccatctaatgtaccag
gctcttgtggagatcctcatccctgatgtcctgagacccattcccagtgccttgactcaa
gccattcgcaactttgccaaaagcctggaaggttggctcaataatgccatgaatgccatt
ccccagagaatgatccagaccaagattgccgctgttagtgcctttgcgcaaacactgcgc
agatacacatctctgaaccacctggctcaggcggcacgtgctgttttgcaaaacacgtca
cagattaaccagatgctgagcgatctcaaccgtgttgactttgccaacgtacaggagcag
gcatcatgggtgtgccagtgtgaggagggagttgttcagcacttggagcaggacttcaag
gccacgctacagcagcaaagctctctggagcagtgggcagcttggctggagaatgtggtc
actcaggtgctcaagccttatgagcaccggtccagcttccccagggcagctcgacagttc
ctgctcaagtggtccttctacagttctatggtgatcagggacctgacccttcgcagtgct
gccagctttggttccttccacctgattcgcctgctgtacgatgagtacatgttttacctt
gtggagcatcgtgtggctcaagctactggagagacgcccattggtgtcatgggggagttc
gacagcctcaacacgctgtccctctctaacatggatagagatgaaaccagtgggatggac
agtgacttggatgacgacatagaggagacgggggaacctcttgcaaagcgagaaaagtcg
gagcacgaggtgatccaggtgatccaggtcggggcactcgaggacgggtcccaccctgta
gtgggggtcgtccagccaggtgtcctccactcgctgccccagccccagcaggaccacact
gaacacattctaaccccttctgccgctactcccaccatccgccactgcagcgccacaggc
aacacctacgcctccgtttga
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integrated database retrieval system
