Cyclopterus lumpus (lumpfish): 117740131
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Entry
117740131 CDS
T09199
Name
(RefSeq) uncharacterized protein LOC117740131
KO
K06745
programmed cell death 1 ligand 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117740131
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117740131
CD molecules [BR:
clum04090
]
Proteins
117740131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
NACHT
C2-set_3
V-set
Ig_2
ig
C2-set_2
AAA_30
NPHP3_N
AAA
NB-ARC
C1-set
Ig_CD22
nSTAND3
RuvB_N
AAA_25
AAA_19
AAA_18
C2-set
AAA_17
Motif
Other DBs
NCBI-GeneID:
117740131
NCBI-ProteinID:
XP_034402227
Ensembl:
ENSCLMG00005009002
LinkDB
All DBs
Position
12:complement(11213685..11221999)
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AA seq
547 aa
AA seq
DB search
MWRNFSLIAHSSADGRFRSVRAEGRRKHRMRSSWLLQDHQVSMDWALIVVLQAMFQPSLS
VLFTVEAEQTTYKSTFGGDVVMGCRFQPKLSNPHADLKVTWHWIGSASVRVVYRMDNWME
HMASQDPDYRGRVRLLTDELQEGRAKIQISRLRINDSGSYQCLVQTEEGADYKTTRLSVV
APYATVTKHIQKAAEEDEVLLSCQSQGYPESSVGWQEGRRRRLDPNTTAASSADQLFTVT
SQIRVRSSDKNNYTCFFTNDGNSATFHIPDDIPVPRVKNNALIIVLSIGMIMVVIIIAVL
MYRRQKGSRTNSTRNLLVNGRGRLVSAADCLGKDKDNEEVIRVFNEVSTEENLGVFLKAH
YCDFSFSSEVRNHWEAFVVEELPHRLRNNKGQPVNLQALLPEARETFFLEGPPGSGKTTI
AHIVVSSWAEGSTHALANLLDLRTLPLLFFVDCSKVKGDLFQEITIQLSLMEKISTEDQL
RTVLARSSEALLLLDGYREGNQFFDESLRKYLMDKGGCRVLVTACPGHCPALKDTVETEG
VLQLQAV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggaacttctctcttatagctcacagctctgcagacgggagattcagatcagtg
cgagctgaaggaagaaggaagcaccggatgagaagcagctggttgttgcaagaccaccag
gtttcaatggactgggccctaattgtcgttttgcaagcgatgttccagccatctctctca
gtgttgttcactgttgaggccgagcaaaccacatacaagtcaacgttcggaggagatgtt
gtgatgggctgcaggtttcagcctaaactatcaaatcctcatgctgacctgaaggtgacc
tggcactggatcggctccgcctcggtccgggtagtgtaccgcatggataactggatggag
cacatggcgtcccaggatcctgactatcggggtagagtgaggcttctcactgatgagctg
caggaaggccgcgccaagatacagatttctaggctcaggatcaatgactctgggagctac
cagtgtttggtacagacagaagaaggagctgattataaaacaacaaggttgtccgttgta
gcaccttatgccacagtgactaaacacattcagaaggctgcagaggaggatgaggtgctg
ctaagctgccagtctcagggataccccgagtcttctgttgggtggcaggagggacgccgg
cgaagactcgatcccaataccactgctgcatcaagtgcagaccagctgttcacagtcacc
agtcagatacgagtcagatcatcagataaaaacaactacacatgcttctttacaaatgat
ggcaactctgccacatttcacattccagatgacatccctgttcctcgtgtcaaaaataat
gctctcatcattgtgttgagcataggaatgataatggtggtcatcatcattgcagtgctc
atgtacagacgacaaaaagggtccaggactaatagtaccaggaaccttttggtcaacggt
cgaggtcgtcttgtttctgctgctgactgcctcggaaaagataaagacaatgaggaagtg
ataagagtgtttaacgaagtttccacggaggaaaacctgggggtgtttctgaaagcccat
tattgtgacttctccttcagctcagaggtgagaaaccactgggaggcttttgttgtggag
gagctgcctcacaggctgcgtaacaataagggccagcctgtgaatcttcaagctttactc
ccagaagcaagagagacatttttccttgagggacccccaggaagtgggaagacgaccata
gcccacatcgtggtctcttcttgggcagaggggtccacacatgccctcgctaacctcctc
gatctcaggacacttccacttctcttctttgtcgactgcagcaaggtgaagggggacttg
tttcaggaaataacaattcaactttctctcatggaaaagatatcaacagaggatcagctg
agaacggtgttagccaggtccagtgaggctctgctgctgttggacgggtatagagaaggg
aaccaattcttcgatgagtccttgaggaagtatctaatggataaaggaggatgcagggtg
ttggtcacggcctgcccgggacactgccccgcgctcaaggacacagttgagacagagggg
gtgctgcagctccaagcagtatga
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integrated database retrieval system
