Cyclopterus lumpus (lumpfish): 117740156
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Entry
117740156 CDS
T09199
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
clum03012
]
117740156 (dhx29)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117740156 (dhx29)
Translation factors [BR:
clum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117740156 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
HA2_C
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
117740156
NCBI-ProteinID:
XP_034402258
Ensembl:
ENSCLMG00005022499
LinkDB
All DBs
Position
12:complement(6387097..6397324)
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AA seq
1377 aa
AA seq
DB search
MGGKKKKSAVQAATSVAPSAAAGRTAAAAAAEDPTKQSANNKPAKPAKENKSKAPKTYSL
ANTAQVDTGGVTDKSILKVAIQAELEKKIIKLINDFREENGDKGPISGRLTNKKLLDLYT
ALQKFSFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDEELPEGFTQQMQEESQKSRPK
FQPPAQQKAAAPSPKAPSNNRIEPTQTTEKDEAASMKDWILRYAEQSSDEEEEQEEEDKR
GKKTHNPELDEKFDPNDRYLALTAQLYDAKEMAAVAKTKGDKAGQRMAQDRIRIIQQEMK
PLESHPVFNPALKVVDVPQKDKKILPVAEEKADASLNLFEQTEKAPPAAKAPVAKKNEPK
DIRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPAPAFHKVAAGRYWRSKVRVQRTEDVLE
VCPTILTEDSMQAQHLAATLALYTLIKGQSVHQLLPPTYRDVWLEWRDSEQQQKEESRTA
ANKPRDQFISRLLTRLKQQQAQNQDQEFGSQGQLGLVSAGDEEPEESWENLAGLDIGEAG
QELEDKSEKRGRGEGALAASREILMKLKKSPLAHKLKAEREQLPVFQHRYRVLEALQRHP
VVVVAGETGSGKSTQIPQFLLEELLTGGKEAKPCNIVVTQPRRISAMSLACRVSQEMGCE
DGPGSRSSLCGYQIRMENQSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVHERSV
QSDFLLTILKDVVMRRSDLQLILMSATVDCDKFSNYFNRCPVISIPGRTFPVEVFHLEDI
VEQTGYVLEKDSEYCQKILEDEEEVSISITQKGGKTGQHQEVILRDSSGWDLGPDLDHFS
SRTRQMLQYMNPNKINMDLLVDLIDYLDKSPQFAVMDGAVLVFLPGLAHIQQLHDLLSSD
KRFRDKNRYRIVALHSTLSSKDQAAAFTVPPAGFRKIVLSTNIAETGVTIPDVVFVIDTG
KTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVQHGFCFRLYPKFRFNSFMDYAIPE
ILRVPLEELCLHIMKCQYGSPEDFLSRALDPPQPQSVSNAVNLLRKIGACHPEHHLLTPL
GHHLAGLPVNVKIGKMLIYGAILGCLEPIATIAAAISEKSPFSTPMNRKEEANLAKAALA
LANSDHLTIYNAYLGWKNSRTDGQRAEMSFCRKYFLNRTALMTIEGVKHELMKMMEQAGF
WSSRSKPQVAAAAAGAALSKQQISVLNAVLAAGLYDSVARVLCTPSVDVLERVACTVETP
QGKAQVHPSSVNRNLQTHGWLLYQEKVKYTKIYLRDTTLISPFPMLLFGGDIDIQHRERL
ISLDGWIHFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMSLEGERTIHIILDLIKSE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaagaagaagaaatcggcggtgcaagcggctacttcagtggccccatcagca
gcagcgggcaggactgctgctgcagcggcggcggaggatccgacgaaacagtcagccaac
aacaagccggctaaaccagcgaaagagaacaagtcaaaagccccaaagacctacagtctt
gccaacactgcccaggttgacacaggtggagtcacggataagtccattcttaaagttgcc
atccaagctgaactagagaagaagatcatcaagctgatcaatgacttcagagaggagaat
ggggacaaagggcccatatccggcagacttacgaacaaaaagttgctggacctgtacacg
gctctgcagaagttcagctttaagagagagcacattgaggaggcgatgaagagtagtgtg
ctgtacggaggggatctccactctgctctcgactggctctgcctcaaccttaaagatgag
gagctgccagaaggttttacccagcagatgcaggaggagagtcagaagagcaggcccaag
ttccagcctcctgctcagcagaaagctgcagccccgagccccaaagcacccagcaacaac
cgcatagagcccacccagaccacagagaaggatgaagctgcaagcatgaaggattggatt
ttacggtatgcagagcagagcagtgatgaggaggaggagcaggaggaggaagacaaaaga
gggaagaagacacacaaccctgaactggatgaaaagttcgatccaaacgacaggtatttg
gcccttactgcgcaattgtatgacgcaaaagaaatggcggctgttgccaagacaaaggga
gacaaggcgggccagaggatggcacaggaccggatacgcatcatacagcaagaaatgaag
ccactggagtcccaccctgtgttcaacccagctctaaaggtggtggacgtgcctcagaag
gacaagaagatacttcctgtcgccgaggaaaaagcggatgccagcttaaacttatttgaa
caaactgaaaaggcccctcctgcggcgaaagctccagttgcgaaaaagaacgagccaaag
gatattcgcaattttgattacacagctcgcagctggacaggaaagtctcccaagcagttc
ctcatagactgggtccgaaagaatctgcccaagagtccggcaccggctttccacaaggtc
gctgccggtcgatactggagatccaaggtgcgtgtgcaaaggaccgaagatgttcttgaa
gtttgtccaacgatcttgacggaggacagcatgcaggctcaacatctggccgccacactg
gccctctacaccctgattaaaggacagtcggtacaccagctcctccctccgacctacaga
gacgtgtggctggagtggagagacagcgagcagcagcagaaggaagagagtcgcactgct
gccaacaaacctcgagaccagttcatctcccggcttctgaccagactcaaacagcagcag
gcccagaaccaagaccaggagtttggatcccaaggccagctggggctggtcagtgctggg
gatgaagagcctgaagagtcctgggagaacctggctggtcttgatattggggaggcgggt
caagaactggaggacaagagtgagaaaagagggaggggggaaggggctcttgcggcatcc
agagagatcttaatgaagctgaagaagtcccctctggcccacaaactaaaggcagagcga
gagcagcttcctgtcttccaacaccggtatcgggtcctggaggctctgcagcgacaccct
gtggtggtggtggcaggtgagacgggcagtggaaagagcacccagatccctcagttcctc
ttggaggagctgttaacgggaggcaaggaggcgaagccctgcaacatcgtggtgacccag
ccccgcaggatctccgccatgagcctggcctgcagagtcagccaggagatgggctgcgag
gatgggccgggatcgaggtcgtcgctgtgtggataccagatccggatggagaatcagtct
ggggagtggacccgcctgctgtactgcactactggagtcctgctcaggaagctccagcac
gacagacacctcagctccctgacgcacatcatcgtagacgaggtccatgagcgcagtgtc
cagtcagacttcctgttaaccattctgaaagatgttgtgatgaggagatccgacctgcag
ctcatcctcatgagtgccacagtggactgtgacaagttctccaactacttcaaccgctgc
ccagtgatcagcattcccgggaggactttcccagtggaggtgttccacttagaagatata
gtggagcagacggggtacgttttggaaaaggactcggagtactgccagaaaattcttgaa
gatgaggaggaagtcagcatctctatcacacagaaaggaggcaagacaggacagcaccag
gaggtgatattgagggactcttccggctgggacctgggtccggatctagaccacttcagc
agcaggactcggcagatgctgcagtacatgaaccccaataagatcaatatggacttactg
gttgacctcatcgactatctagacaaatccccacaatttgcagtgatggatggagccgtt
ctcgtgttcctcccgggtctggctcacatccagcagctccacgacctgctttcttcagac
aagaggttcagggacaaaaacaggtacaggatcgttgctctccactccactctctcatca
aaggaccaggctgctgccttcacagtgccacctgctggatttagaaagattgtcttgtcg
actaacattgctgagacaggtgtgactatccccgacgttgtgtttgtcatcgacaccgga
aagactaaagaaaataagtaccatgagagcagccagatgagttccctggtggaaactttt
gtctccaaagcgagtgccctccagaggcaagggagagcaggacgcgtccaacacggcttc
tgcttcaggctctatccaaagttcaggtttaactccttcatggattacgccattccagag
atactacgggtcccactggaggagctctgccttcatatcatgaaatgtcagtacggctcc
ccagaggactttctgagccgggccctggatccccctcagccccagtcggtcagtaacgcc
gtcaacctgctgaggaagatcggcgcgtgtcaccccgaacatcatctcctcacccctctg
ggacaccacctggcgggtctgcccgtcaatgtgaagattggcaagatgctcatctatgga
gctatcctcggctgcctggagcccatagcaaccatcgcggcagcaatctcagagaagtct
cccttctccacaccgatgaacaggaaggaggaagccaacctggccaaagccgccctggca
ttggccaactctgatcacctgacgatatataatgcatatctggggtggaagaactcccgg
acggacggacaaagggcagaaatgtccttctgtagaaaatacttcctcaatcgcacagcg
ctcatgacaatagagggtgtgaagcacgagctgatgaagatgatggagcaggcgggtttc
tggtcgtctcgctccaagccacaagtggcggcggcggcggcgggggcggcgctgtccaag
cagcagatctccgtcctgaacgcggtgctggcggcggggctctacgacagcgtggcccgg
gtcttgtgcaccccctctgtggatgtgctcgagcgagtggcctgcacggtggagacgccc
caaggcaaggctcaggtccacccctcgtccgttaaccgcaacctgcagacacacggctgg
ctgctttaccaggagaaggtgaaatacacgaagatctacctgcgagacaccactctgata
tctcccttccccatgctgctgttcggaggcgacatcgatatccagcacagagaaaggctc
atctccctagatgggtggatccacttccaggctcctgtgcggattggcgtgatcttcaaa
cacctgaggaagctgatggactctttgctggaaaagaagctggagaacccgaggatgagt
cttgaaggtgagaggaccatccatataattctggatctgatcaaatcagagtga
DBGET
integrated database retrieval system
