Cyclopterus lumpus (lumpfish): 117740180
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Entry
117740180 CDS
T09199
Symbol
rabepk
Name
(RefSeq) rab9 effector protein with kelch motifs
KO
K20285
Rab9 effector protein with kelch motifs
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740180 (rabepk)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117740180 (rabepk)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_6
Kelch_2
Kelch_1
NANM
DUF6242
Rax2
FapA
Motif
Other DBs
NCBI-GeneID:
117740180
NCBI-ProteinID:
XP_034402292
Ensembl:
ENSCLMG00005011413
UniProt:
A0A8C2Z752
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Position
12:8733421..8737139
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AA seq
351 aa
AA seq
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MEFLPVLDPLDKPKEGIWYSLIPRGASPGVSVGHTCTFIPSRDEGKGRIFIVGGANPSGS
FSLSHIINLDNHEWDIPEWEGLESRYEHCSFVPDSCLQSLWVFGGAQQSGNRNCIQNIQL
MDSGSHWKNVVVNGKPPSPRTYHTSSACQGDRLYVYSGGEAGASPVSDPKLHVFDTVSST
WSQPGTQGRNLQARHGHIIAAVGSKIYIHGGMAGDKFHNDLYSLDTRSMKWEKVQAKGDI
PPGVAAHSALVLGENIYIFGGMTADGAGNAMYRFNTDKSSWVLMKFEGDMPPNRLDHSMC
VLPWMVCGERNEDEEQASSPAASKTINLAFVFGGMDTEGVIHNDCIVTVIT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctcccagtacttgaccctctagataaacccaaagaaggaatatggtattct
ttgatacccaggggggcttctccaggtgttagtgtgggtcacacctgtacgtttattcca
tcgagagatgaaggaaaaggaagaatctttattgttgggggagccaaccccagtggcagt
ttctcactttcgcacatcataaatctagataatcatgaatgggacatcccagagtgggag
ggtttggagtcacggtatgaacactgcagctttgtgccagacagctgccttcagagccta
tgggtgtttggaggggcacagcagagtggcaatcgcaattgtatccagaatatacagcta
atggacagtgggtctcactggaagaatgtagtggtcaatggcaaaccccccagtcccagg
acataccacaccagctcagcgtgccaaggggaccgactgtatgtctattctggtggggaa
gcaggagcttcaccagtctcagaccccaaacttcatgtatttgatacagtgtcttcaact
tggtcccagccaggaacacaaggcagaaacctgcaagccagacatggccacattatcgct
gcagttggttcaaagatctacattcatggaggcatggctggagacaaattccacaacgat
ttgtattctcttgatacaaggagcatgaagtgggagaaagtgcaggccaaaggagacatc
ccaccaggagtagcagcccactcagcgttggtactgggcgagaacatctacatatttggg
gggatgactgctgatggagccggcaacgccatgtacagattcaacacggacaaaagtagt
tgggtcctcatgaagtttgaaggcgatatgccccccaaccgcctagaccactccatgtgt
gtattgccctggatggtgtgtggtgagaggaatgaagacgaggagcaagccagtagccca
gcagcctcaaaaactataaatctggcttttgtatttggaggaatggacaccgagggtgtc
attcataatgactgcattgtgactgttataacatga
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