Cyclopterus lumpus (lumpfish): 117740198
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Entry
117740198 CDS
T09199
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117740198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117740198
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117740198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ALKBH8_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
117740198
NCBI-ProteinID:
XP_034402317
Ensembl:
ENSCLMG00005002624
LinkDB
All DBs
Position
12:9525354..9545470
Genome browser
AA seq
2745 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPMLLQTLLSRNPKIFRDKSVMQQPMMQQ
YKMSQNQVHGSPGSNYQQTTVPQSPSGCFASPQSGSGARFLPQQNSPIPSPYTPQSPADY
MQYNPPSYSQHQQTQQVRNIHDDKVSAPLSSTASNHNVRLGSDEDYINMAHRLGNEENDP
SMRAATFPVKSPESVCSPAGSEETAKTGSRPPLIMQSPPPDMPPVAAPDLLLTPADRKKK
QKEKSKEENELTDKNASYGIVNSPPKESTRLTIKLSRVKLSEMDQPEELPLRPQVNSEHE
TDLTNNNNNQLSRTAQDLSHKFGAKEQANCKQVPVQPNSKESGAVSGVVFDDAEIDTLAE
IERIERESASEKERWSKEVQDKDKPLKKRKQDTYPQESGAESSDGPTLQGGNTDSKLKPK
KTNAASNGASRPALMVSIDLQQAGRMKGQPVVVLEAQTFCEDHLRHLKTKTDGKVDKVAE
SRPGIIRQHADNPKKSCSDGQPEAPKQKPESQRESKHKHDNKTVSGKRHSDDRRPDTPRQ
KHDKVSDLRHKEEKNHNIHRSHVSNPETPKTTIKGERNSRHGEGKAKDRDKDKVGEDKDK
DKAKDKDRDDKDKDKAKDKDRDDKDKDKAKDKDDRDKDKAKDKDRDDRDKEKAKDKAGDR
VKDKDRDKDRDRDKVGDRDDRDKDKEKEKDRDRVKDKDRDNDRERDKVGDKDRDKNREKV
RDRDKDRDRDKDKDGEKNRARDKDRDRDRDRKHKTSRENCNKHSPDRPTKPDSPRVKQDD
GGKSTDLNGRQKTESSSLQNAQQHKKDRKSGDGGISCQAGNKQQSSETKRCEFPSYLLGG
KSGSLKNFVIPKLKRDAKDLQLPSKLIEGWSEPLVRLERLSLIKNLNQGAKPVVVLNKLN
IDEVKRIIKESRNAHGSRPRSFDKSGRENKRKHSMISKKSKYAELDEDEEEEDDDDDVHS
DNESPKKKSKKDHDKSWKQEEKRGAGQHRSGGSARGSSSCHRSSNGSDEDSPSPSLRDVA
RKLKKKEKQKNKKAYESKLTPEEKMDSSTFKRFTANMDSILESLDDVDLTATDEDEIPEE
LLLGKHQLSELGNDSAKMKAMCVFNKCSTKKLVKMLNILEKNIQDSVKLSTLMNHENDSM
DEERLWRDLIMERVAKSADACLTALHIMTSPHMPKAVYIEDVIERVLQYTKFHLQNSLYP
QYDPVYRKGGMHTSKSKRAKISTHKQKVVVMLYDKVCDILSNMSELLEIQLLTDTTILQV
STLGITPFFVENVSELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFR
LNSDSDKEPLYIQMVTALVLQLIQCVVRLPSERDTEGEHKKVDKDVFITNSYETAMRTAQ
NFLSVFLKKCGSKQGEDDYRPLFENFVHDLLSTVNRPEWPAAELLLSLLGRLLVHQFSNK
QTEMALRVASLDYLGTVASSLRKDAVSSNMDQKAIDRILKEQTQGSDEVPKLQKALLDYL
KENIETDPSLVFARKFYIAQWFRDTTTEADKAVKSQNDDEDFKGRHQSVDVDSTEEIIQK
AETRKKFLRKIMKISPSDLNSLSVNSDTIDYEDSCLIVRYLASMRPFSQSFDIYLSQILR
VLGESAIAVRTKAMKCLSEVVAVDPSILGRLDMQRGVHCRLMDNSTSVREAAVELLGRFV
LSRPQLIEQYYDMLIERILDTGISVRKRVIKILRDICLEMPDFHKITEMCVRMIRRVNDE
EGIKKLVNETFQKIWFTPTPGHDKNAMTRKILNITDVVLACKDSGYDWFEQLLQNLLKSE
EQASYKPAKKACVQLVDNLVEHILKHEESIADCEDKGVNTGRLVACITTLYLFSKIRAQL
MVKHAMTMQPYLTTKCNTQNDFMVICNVAKILELVVPLMELPSETFLTTLEEDLMKLIIK
YGMTVVQHCVSCLGAVVNKVTHNYKFVWACFNRYYGALAKLKTQHQEDPNSSTLAANKPT
LLRSLFTVGALCRHFDFDQEEFKGTSKIVIKDKVLELLLYFTTHEDEEVQIKAITGLGFQ
FIMHPELMFVQDVKVLYNNTMSDENSLVTLKIQVLKNLQTYLQDEDSRMQEADRGWKSQS
KQEDLKEMGDISSGMSSSIMQIYLKQVLESFFHSQSTVRHFALSVIILTLSQGLIHPVQC
VPYLIAMGTDPEPTMKNKADQQLVDIDKKYSGFIHMKAVAGLKMSYQVQQAINGSKGAVI
RGFRHDDSDASLCAHLYTLVRGNRQHRRAFLISLLNLFDDSSKTEVNRLLFIADNLACFP
YQTQEEPLFIMHHVDITLSVSGSNLLQSFKESLHKGPIQKEKKTTTKKMKTKKKKKKKKK
PQRRKHSSDDDDDDDDDDNDDDEEDDEQSSSTSSSSDEDDEVVQSQKKPVLSDSEAEIED
EDAVMDRLPENHSPLLDFASASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDK
TVNKKSKVHFNPRQTLDYLKRDLANTDLSNEIKRNIVKQYLDFKVLMEHLDRDEEDEEGE
ASANARNKAITALLKVPKSSNQNHSKIETVPVETEEEESEDEDPPVPQRKPRKGGEPAED
TGHLNERVKAMDIIAIWCPKYKDRPQIARVIQRIKTGYSIHWMTGSYSAPWAEVKKREGR
KKVPWVDTIKESDIIYKKIPFTSGQKLSNKVAQTLRALYAAKDGE
NT seq
8238 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctacccttgccttctcctctccctgccaccactgctaagagcctg
ctctacaatggaaggatctctgaagaggtcagcagcctactggtgtgtcgggacgaaaat
ctggtgactcaactggcacatagccttaaccaagtctccactgaacacatagagttgaag
gacaacttggggaatgacgaacccgagggtgacatgccaatgcttctacaaactttgctg
tccaggaaccccaaaatcttcagggacaaaagtgtaatgcagcagccaatgatgcaacag
tataagatgtctcagaatcaggtgcatgggagtccaggatcaaactatcagcaaaccact
gtccctcaaagtccctctggatgctttgcctccccacagtctggatcgggtgcacggttc
ttgccccagcagaacagccctatacccagtccctatacccctcagagtcctgcagactac
atgcagtacaatccacccagttactctcaacaccaacagacacagcaagttcgaaatatc
catgacgacaaggtctctgctccgctatcaagtacggcatctaatcataatgtgagacta
ggctcagatgaagattacatcaacatggctcacagactgggaaatgaggagaatgacccc
tccatgagggctgccacttttccagttaaatcaccagagtctgtgtgttcccctgctggg
agtgaagagacagctaaaacagggtccaggcctccccttatcatgcagtcccctccacct
gatatgccaccagttgcagcacctgacttgctccttacccccgctgaccgcaaaaaaaag
cagaaagaaaagagtaaagaagaaaatgagctgacagacaaaaatgcctcatatggcatt
gttaattctccaccaaaagagtccactaggctgactattaaactgtcccgagttaagctt
tcagaaatggatcaacctgaagagcttcctctgaggccacaagttaattcagaacatgaa
actgatttgacaaataataataataatcagttgtcaaggactgcccaggacctgtcacac
aagttcggtgctaaggagcaggcaaactgtaagcaggttcctgttcagccaaatagcaag
gagtctggagccgtcagtggggttgtgtttgatgatgctgaaatcgacacgctggcagag
atcgagagaatagaacgcgagtcggccagtgagaaagaaagatggtctaaagaagtccag
gataaagataagccactgaagaaacggaagcaagacacgtatcctcaggaatctggagct
gagtcaagtgacgggccgacattacaaggcggcaacactgatagcaagttgaaacccaag
aagacaaatgctgcaagtaacggtgccagtcgacctgctttgatggtcagtattgatctg
cagcaagctggcagaatgaaaggacagcctgtcgtggtcttggaagcacagacgttctgt
gaggatcacctacggcacctaaagacaaagactgatggaaaggtggataaagttgctgaa
agcagaccggggatcatccgacagcatgctgacaaccccaagaagtcttgctcagacggg
caaccagaagcccccaagcagaagccagaaagtcaacgagaatccaaacacaagcatgac
aacaaaactgtcagtggcaagagacactcggacgacaggcggccagacacaccgcggcag
aaacatgacaaggtttcagacttgcgccacaaagaggaaaagaaccacaacattcacaga
tcccatgtcagcaaccctgagactccaaaaaccacgatcaagggggagcgcaactccaga
cacggagaaggcaaagccaaggacagagataaagacaaagttggagaggataaggataag
gacaaagcgaaggataaagatagagatgataaggataaggacaaagctaaagataaagat
agagatgataaggataaggacaaagcaaaagacaaagacgatagggataaggacaaagca
aaggataaagatagagatgatagggataaggaaaaagcaaaagataaagctggagatcgg
gtgaaggacaaagatagagataaggacagagatagagacaaagttggcgatagagatgat
agggataaggacaaagagaaagagaaagatagagatagggttaaggacaaagacagagat
aatgatcgagaaagagacaaagttggagataaagatagggataagaacagagaaaaggtt
agagatagggataaggacagagatagagataaagataaagatggagaaaaaaacagagct
cgggataaggacagagatagagaccgagataggaagcacaagacgtcgagggaaaactgc
aacaaacactctcctgacaggcctactaaacctgacagcccgagagtgaagcaagacgat
ggtggaaaatccactgaccttaatggtcgacagaagacagagagctccagccttcaaaac
gcacaacaacataagaaagacaggaaaagtggggatggcggcattagctgccaagctgga
aacaaacagcagtcttcagagacaaaacgttgcgagttcccctcatacctactgggtggc
aagtcgggaagtctgaagaactttgtgattcctaaattaaaacgggatgcgaaagatctc
caacttccaagcaaactgattgagggctggagtgaacccctggtcaggctggagagattg
tcattgataaagaacctaaaccaaggagctaagcctgttgttgtgctcaacaaactcaat
attgatgaggtaaaaaggatcattaaggaaagcaggaacgcacacggctccagacccaga
tcctttgacaaatcagggagagagaacaagcgtaagcacagtatgatcagtaagaaatcc
aagtacgctgagctggatgaagatgaggaggaggaggacgatgatgatgacgttcactct
gacaatgagtctccaaagaaaaagtccaagaaagaccacgacaagtcatggaagcaggaa
gagaagaggggagctggacagcaccgaagcggaggttctgctcgggggtccagcagctgc
caccggagttcaaacggctcagatgaagactctccatccccaagcctgcgtgatgttgcc
agaaaattgaagaaaaaggagaaacaaaaaaacaagaaagcgtatgaatccaagctgaca
ccagaggaaaagatggactcctccacatttaagagattcacggctaacatggacagcatt
ctcgagagcctcgatgacgtggacctcactgccacagatgaggatgagatacctgaggag
ctgttgcttggaaagcaccagttgagcgagctaggcaatgattccgctaagatgaaagct
atgtgcgtctttaacaagtgttcaactaagaaactggtgaaaatgttgaatatcctggag
aagaacattcaagacagcgtcaaactttctacactaatgaatcatgaaaatgattccatg
gatgaggagcggttgtggcgtgaccttatcatggaacgggtagctaagtctgctgatgcc
tgtttgactgcactccacatcatgacgtctccacacatgcccaaggcagtttacatagaa
gatgtgattgagagggtgttgcagtacaccaagttccatctgcagaattctctgtaccct
cagtatgaccccgtctacagaaaaggtggcatgcatacttcaaagtctaagcgagcaaag
atttcaacccataaacagaaggtggtagtcatgctctacgacaaagtgtgtgatattctc
agcaatatgtcagagcttctggagatccagctgctaactgacaccactattctccaggtg
tccactctgggcatcacacctttttttgtggagaatgtcagtgaactgcagttatgtgcc
atcacacttgtgacagcagtgttttctcgttacgagaagcacaggcagctcattcttgaa
gagatcttcacctccttagctagactgccgactagtaaacgcagcctcaggaactttagg
ctaaacagtgattcggataaagagcccttgtatatccagatggtcacagcattggttctt
cagctcatccagtgtgtggttcggcttccctcagagagggatacagaaggtgaacataag
aaggttgataaagatgtcttcatcacaaactcctatgaaactgccatgaggacagctcag
aacttcctatctgtgtttctcaagaagtgtggtagtaagcagggagaggatgactacagg
cctctgtttgagaactttgttcatgacctgctgtctacagtgaaccggcctgagtggcct
gcagctgaactgctgctcagtttactgggccggctgttggtgcaccagttcagtaacaag
cagacagaaatggcgctcagggtggcatcgctggactacctcggcactgtcgcttctagc
ctgcgtaaagatgctgtcagtagcaacatggaccaaaaggctatcgaccgcatactcaaa
gagcagactcaaggcagtgatgaggtcccgaaactccagaaggccttgctggactaccta
aaggagaacattgagacagatccatctctggtgtttgccaggaagttttatattgctcag
tggttcagggacactacaactgaggcagacaaagcggtgaagtctcaaaatgacgatgag
gacttcaaaggtcgacatcagtctgtggatgttgactcaactgaggagattatacagaag
gccgagacacgaaagaaattcctccgcaagatcatgaagatttcaccatcagatttgaat
tctttgagtgtaaactctgacacaatcgactatgaggactcgtgcctgatcgtcagatat
ctggcctccatgaggccgttttcacagagttttgatatttatttatcacagattctgaga
gtgctgggtgagagtgccatagcagtccgaactaaagccatgaagtgtctgtctgaagta
gtagctgtggatccaagtattcttggacggttggatatgcagcgtggggttcactgtcgc
ctcatggacaactccaccagtgtgcgagaggcagccgtggagctccttggccgctttgtg
ctaagtcgaccgcagctcattgagcagtactatgacatgctcattgaaaggatattggac
accggtataagtgtaaggaagagggtcataaagatcctgagggatatttgcctggagatg
ccggacttccataagatcaccgagatgtgtgtcagaatgatccgaagggtcaacgatgaa
gaggggatcaagaaactggtgaatgagacattccaaaaaatctggttcactcccacaccc
ggtcatgacaaaaatgccatgactcggaagatcttgaacatcacagatgtggtgttagcg
tgtaaagattcaggctatgattggtttgagcagcttctccaaaatctactgaagtcagaa
gagcaagcttcgtacaaacctgccaagaaagcctgtgttcagttggtggacaatctcgtg
gagcacatactgaaacacgaggagtctattgcagactgtgaggacaaaggggtcaacaca
ggtcgtctggtagcatgcatcaccactctttacctgttcagcaagatcagagcgcagtta
atggtcaaacatgccatgactatgcagccctacttgaccaccaagtgcaacactcagaat
gacttcatggtgatatgtaacgtggcgaagatcttggagctggtggtgcctctgatggag
ctcccaagtgagactttcctcactaccttagaagaagacttgatgaagctcatcatcaaa
tacggcatgacggttgtccagcactgtgtcagctgtcttggtgctgtcgtcaacaaggtc
acacacaactacaagtttgtctgggcttgtttcaatcgctactacggagctctggcaaaa
ctgaagacacagcaccaggaggaccccaacagctccactctggctgctaacaaacctact
ctcctgcgctcactgttcactgtgggggcgctgtgtcgacactttgattttgaccaagag
gagttcaagggtactagcaagattgtcatcaaggataaggtgctggagcttctgttgtac
ttcaccactcatgaagatgaagaggtccagatcaaggccatcacgggtctaggcttccag
ttcatcatgcatccagagctcatgtttgtgcaggatgtgaaggttctgtacaacaatacc
atgtcagatgaaaacagtttggtcactctgaagatccaggtgctaaaaaacctgcagaca
tacctgcaagacgaggactctcgaatgcaggaggccgatcgcggatggaagagccaatcc
aagcaagaggatctgaaagaaatgggggacatctcatcaggcatgagcagctccataatg
cagatttacctgaagcaggtgctggagtccttcttccactcgcagtccactgttcggcac
tttgccctgagtgtcatcatactgactctcagccagggcctcatccaccctgttcagtgt
gttccttacttgattgccatgggaacagaccctgagccaaccatgaagaacaaagccgat
caacaattggtggacatcgataagaaatattcaggcttcattcatatgaaggctgtagca
gggttgaagatgtcttatcaggtgcaacaggcaataaatggatccaaaggtgcagtgatt
cgaggttttcgccacgatgactcagacgcttctctctgcgctcacctctacactctggtc
cgagggaaccgacaacatagacgggctttcctcatttccctgctcaacttgtttgatgac
agctccaaaacagaagtgaacaggctgttgttcatagcagacaacttggcctgcttcccc
taccagacccaggaggagcctctttttatcatgcaccatgtagatattactctgtctgtc
tctggcagcaacctgctccagtctttcaaggagtctttacacaaaggacccatccagaag
gaaaagaagacaacaacaaagaagatgaagacaaaaaagaagaagaaaaagaagaagaag
cctcagagaagaaaacacagctctgatgatgatgatgatgatgacgatgacgacaacgat
gatgacgaagaggacgatgagcagagcagtagcacatccagcagcagcgatgaggatgat
gaggtggttcagagtcaaaagaaacccgtgctctctgattctgaagctgaaatagaggat
gaggatgcagtgatggaccgtctgcctgaaaaccacagccctctgctggactttgccagt
gcttcacagggcattctgctactgctggtgctaaaacaacatctgaagaacctgtatggc
ttctccgacagcaaaatccagaaatattccccaacggagtcggccaaagtgtacgacaag
acagtgaacaagaaatctaaggtgcacttcaaccctcgtcagacactggattacctgaag
cgggaccttgccaacacagatcttagcaacgagatcaagaggaatattgtgaaacaatat
ttggattttaaggtactaatggagcacttggatcgtgacgaagaggacgaggagggtgaa
gcaagtgccaatgccagaaacaaagccattactgcactcttgaaggtcccaaaatcttca
aaccagaaccacagtaaaattgagactgtaccagtggagacagaggaggaggagagtgag
gatgaagatccccctgtgccacagcggaaaccaaggaaaggcggggagcccgcagaggat
acaggtcacctgaatgagagagtgaaggccatggacatcattgccatctggtgtcccaaa
tacaaagacagaccacagatagccagggtcatccagaggatcaaaactggctacagtata
cactggatgactggatcttactctgcgccctgggctgaggtaaagaaacgggaaggtcgc
aaaaaggttccctgggttgacaccatcaaggagtcagacatcatttacaagaaaatacct
tttacaagtggacaaaagctatcgaacaaagtggcacagacgttacgagcactatacgct
gccaaggacggggagtaa
DBGET
integrated database retrieval system
