Cyclopterus lumpus (lumpfish): 117740242
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Entry
117740242 CDS
T09199
Symbol
cacna1bb
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117740242 (cacna1bb)
04020 Calcium signaling pathway
117740242 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117740242 (cacna1bb)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117740242 (cacna1bb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117740242
NCBI-ProteinID:
XP_034402396
LinkDB
All DBs
Position
12:15298656..15434318
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AA seq
2291 aa
AA seq
DB search
MILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHTTCFKIETGERAADWPCGLEAPARTCPNG
TQCREYWTGPNFGITNFDNILFAVLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLL
EEEDEIAEEKSPLDGAWYKRKQNLPVLKRGKVKKGINDLIGDEEGEDPFADISSIPPPGS
PFGRASMKSSGKMDSSSYFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYD
QPDWLTTALYAAEFVFLGLFLTEMSLKMYGLGARNYFHSSFNCFDFGVIVGSILEVIWDM
IKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFAL
LGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGDRVSRGRSSRHVL
LRLLHRPHALWNYTLLNVFLAIAVDNLANAQELTKDEEEQEKAANKKLALQKALEVKEVS
PISAANISIAAFVKQNREALSRKSSINSIQSPKEQQRSAKAMSVWEQRTNQLRRHNVRTS
SEALFNELDPEERLQTSSTLHLHPDMKTHLDRPLVVEAKNGDKPGRSPEGAWKESGDPRQ
QDGVGDNFHTHTRKHHRHRDRNGESREGGEGRGGRHHTHHSRSRDHNTDGAQIRERRGES
SHSRDGGQGHRQHHQAGSPEEEANDCRGGEERGHRHHHSHRPPKEGNGLMANGAQGERRG
RGGGGGGDSNGERKGRCSRMVRAQSTLDGDDCKRNKNGTKGHRERQPDSEEEGLASSPLQ
PMRSTLSLGEKQEDADNQKNSTRASQAGLNSSAILIPVTITAPPGETTIIPMNNIDCDNF
RLGEEKKDLEEDEEEAANGPRQILPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVIT
MSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNI
LDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLDYDRDDVAAQPREW
KKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATYEDQGPSPGYRMETSIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENKQSFQ
YKMWKFVCRPPFEYAIMTLIALNTVVLMMKFYGAPDLYEVMLKYLNIVFTALFTLECILK
IIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKDKMINLSFLRLFRAARLIKLLRQGY
TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETAINHHNNFQTFFQ
ALTLLFRSATGEAWHEIMLACLSNRPCDSLSGTTGKECGSDFAYFYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDASILGPHHLDEYIRVWAEYDPAACGRMTYRDMYEMLRDMSPPLG
LGKKCPHRVAYKRLVRMNMPIAEDRTVHFTSTLMALIRTALEIKLASGVLAQHLCDADLK
REISRVWPSLSQKTVDLLVTPPKYNELTVGKVYAALMIFDFYKQTCAKRLQQQHSGGQQS
KLGALFRPMLALPHIQEVEPSICSPKQPLPPEPEAKPEALPTTSIPSVNRDTILNQRSAI
KHSQSGDVSQATQQRPKVRRKLQRGQSEDVPCSPRPQQEFVELKQVEDISDTEEYPSLEG
HCRAASLPRLNAEYYRSHPRHVPGTHLAPIVDLSPIRRSASSLMPHRYQEVGLSEYDLER
PDLAQDEGQDRAQHHHHHHRCHRRRDKDKDKKQKSLDRAASMQPSSTVDSFTDPSAEGLS
RERARERDRSRPHERRHHSSAGEKQRYYSCDRYGSREQCHTKSAGPSRSTSPGERQDAVF
VKQHGSSVVKAGPGTLPSGSSTPGRGRRQLPQTPLTPRPAVTYKTANSSPLQSGASSAAT
GHQTRVSRGFSEHERLHWGHDESPIPVTRIGSDPNLNRQSQVASRQALLVEDFQDTVSSH
GGGRSARTATSTTAASTSHETAAAPVTAAGAQGRAGAVPNGYHFTLGVNSASGPGSRGTG
SLREREEEDWC
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgctacaattatcgccaactgcatcgtcttggccctggagcagcatctgccc
gccagcgacaagacgcccatgtccgaacgcctggacgacacagagccctactttattgga
atattctgttttgaggctgccattaagatcatcgccctgggcttcgcatttcacaaaggc
tcctacctacgcaacggctggaatgtaatggacttcgtggtcgtcctcacgggaatcctg
gccacggtgggttcggacttcgacctgcgaacactgcgagcagtgagagtgctgagaccc
ctgaaacttgtgtcaggaatccccagtctccaggtggtattgaagtccataatgaaagcc
atggttcctctgctccagatcggcctgctgcttttcttcgccatcgtcatgtttgccatc
atcggggtggagttttacatgggcaaattccacaccacctgcttcaagatagagactggt
gagcgagcagcagactggccttgtggtctggaggctccggccaggacgtgtcccaacggg
acccagtgcagagagtactggactggacccaactttggcatcaccaactttgacaacatc
ctgtttgcagtgctcactgtgttccagtgcatcaccatggagggctgggtggacatcctc
tacagcaccaatgatgtagcaggaaacacctggaactggctctacttcatccctctcatc
atcatcggctccttcttcatgctcaacctggtgctcggtgtcctctctggagaatttgcc
aaagaaagagagcgtgtggagaagaggcaggagttcctgaagctccggaggcagcagcag
atcgagagagagctcaccgggtacttggagtggatctgcaaagcagaggaggtgttgctg
gaagaggaggatgagattgcagaggagaagtccccgctggatggtgcgtggtacaagagg
aaacaaaaccttccagtcctgaaaagaggcaaagtcaagaaaggtataaacgacctgatc
ggcgatgaggagggtgaggatccttttgcagacatctcctccattcctcctcctggctct
ccgtttggtcgggccagcatgaagagcagcggtaagatggatagctcctcatacttccgg
cgtaaggagaaaaggacccgcttcttcatccgccgcatggtgaaagctcagagcttctac
tggatcgttctgtgtctggtgggcctcaacactctgtgcgtggccatagtccactacgac
cagcccgattggctcacaacggccctctacgcggccgagtttgtgttcctgggtttgttt
ctgactgagatgtccttgaagatgtacggccttggagcgaggaattatttccactcctcc
ttcaactgctttgattttggggtgattgtgggaagtattttggaggtgatctgggacatg
atcaaacccggggcctcgtttggaatcagtgtgctgagagctctgcgactgctcaggata
ttcaaagtcaccaagtactggaactcattgaggaacctcgtggtgtccctcctcaattcc
atgaagtccatcatcagcttgctcttcctcctcttcctcttcatcgtggtctttgctctg
ctgggcatgcagctcttcggaggacagtttaactttgaagaagagacgccaacaacaaac
tttgataccttcccagcggccattctcactgtgttccagattctgactggcgaggactgg
aacgccgtgatgtaccacggggatcgagtctcaagggggcgttcgtcgaggcatgttctc
ctccgtctacttcatcgtcctcacgctctttggaactacaccctcctgaatgtcttcttg
gctatcgccgtcgacaacctcgctaatgcacaggagctgactaaggatgaagaggagcag
gagaaggcggccaataagaagcttgccctgcagaaagctttggaggtgaaggaagtcagc
ccgatatctgcagccaacatctcaatcgctgcttttgtaaagcaaaatcgagaggcactc
tctcgcaagtcgtccatcaacagcattcagtcacctaaggagcagcagcgctccgcaaag
gccatgtcagtgtgggagcagaggaccaaccagctaaggagacacaacgtacggacgagc
agcgaggctttgttcaacgagctcgacccggaggagcgcctccagacgtcctccaccctc
catctgcacccggacatgaagactcacctggaccggcctcttgtggtggaggccaagaac
ggggacaaacccggcaggtcacccgaaggagcgtggaaggagtcgggggatccccggcag
caggacggggtgggagacaacttccacacgcacaccaggaagcaccaccggcaccgcgac
aggaacggggagagcagggaggggggcgaaggccggggagggaggcaccacacccatcac
agccggagcagagatcacaacaccgacggtgcccagataagagagaggagaggggagagc
agccacagccgcgacggagggcagggacaccggcaacaccaccaggccggctcccctgag
gaggaggccaatgactgtcgaggaggagaagagaggggccaccgccaccatcactcccat
cgtccgccaaaggaggggaacgggctgatggcgaatggcgcccagggagagcgcaggggg
aggggtggaggaggaggaggggacagtaatggagagaggaagggacgctgctcccgtatg
gtcagagctcagtctactctggatggagacgactgtaagaggaacaagaatggaaccaaa
ggccacagggagaggcagccggattctgaggaggaaggcctcgcctccagtcctctgcag
ccaatgcggagcaccttgagtcttggagaaaagcaagaggatgctgacaaccagaagaac
tccaccagggccagccaggccggcctcaacagcagcgccatcctcatccccgtcaccatc
actgccccgcccggagaaaccaccatcatacccatgaacaatattgactgcgacaacttc
cgacttggtgaggagaagaaagacctggaggaggatgaggaggaggcagctaatgggcct
cggcagatccttccctacagctccatgttcatcttcgggcaaacaaaccctgtgcgtcgg
ctgtgtcactacgtggtgaacctgcgctactttgaaatgtgcatcctgatggtcatcacc
atgagcagcatcgccctggcagccgaggaccccgtgcaagccaacgcgccgcgcaacaac
gttctcaagtatctggactacgtctttacgggggtcttcacttttgagatggtgattaag
atgatcgacttgggactgctcctccacccgggcgcttatttccgtgacctgtggaacatt
ctggacttcatagtggtcagcggagccctggtggcctttgcctgctcagggacgaagggc
aaggacatcaacaccatcaagtccctgagggtcctccgagtcctgcggccactcaagacc
attaaacgtcttcccaagctgaaggcggtgttcgactgcgtcgtgaactctctgaagaac
gttctcaacatcctcatcgtctacatgctcttcatgttcatcttcgctgttatcgccgtg
cagctctttaagggcaagttcttctactgcaccgacgagtccaagggtctggagaaagac
tgcaggggtcagtttctggattacgacagggatgacgtggcagctcagcccagagagtgg
aagaagtacgagttccactacgacaatgttctctgggccttcctgacgctcttcacggtg
tccacgggggagggctggccactggtcctgaagcactcagtggacgccacttatgaggac
cagggccccagcccaggctaccgcatggagacgtccatcttctatgtggtctacttcgtg
gtgttccccttcttcttcgtcaacatattcgtggctttgatcatcatcaccttccaggag
cagggggacaaggccatgtcggagtgcagcctggagaagaacgagagggcttgtattgac
tttgccatcaacgccaagccgctgacgagatacatgccggagaacaagcagtccttccag
tacaagatgtggaagtttgtgtgtcgccccccgttcgagtacgccatcatgactttaata
gccctcaacacagtcgtgctgatgatgaagttctacggagctcctgacctgtacgaagtc
atgctgaaatacttgaacatcgtcttcacagccctctttacactggaatgcatccttaag
attattgccttcggtccactgaattacctgaaagccgcctggaacgtgttcgacttcgtg
accgtgctcggaagcatcacagacatcttggtcacagagattaaggacaagatgatcaac
ctgagtttcctcaggctgttcagagcggctcgtctcatcaagctgctgcggcagggctac
acaatccgcatcctgctgtggacctttgtccagtccttcaaggccctgccgtatgtctgc
ctgctcattgccatgctgttcttcatctatgccatcatcggaatgcaggtctttggaaac
atcaagctgaacgaggagacggcaataaatcaccacaacaacttccagacgtttttccag
gccttgactcttctcttcaggagtgcgacaggcgaggcgtggcatgagatcatgttagct
tgtctcagtaaccggccgtgtgatagcctctcaggaaccacagggaaggagtgtgggagt
gactttgcctacttctactttgtctccttcatcttcctctgctccttcctgatgttgaac
ctgtttgttgctgtcattatggacaactttgagtacctgacgagagacgcctccatcctg
ggacctcatcacctggacgaatacatccgcgtgtgggcagagtacgaccctgcagcctgc
ggccgcatgacttaccgcgatatgtacgagatgcttcgcgacatgtcccctccgctaggt
ttggggaagaaatgccctcatcgagtcgcctataagcgattggtgaggatgaacatgccc
attgcggaggaccggacggtgcatttcacctccacgctgatggccctgattcgcacagcc
ctggagatcaaactggcatctggcgtcctggcgcagcatttgtgcgacgctgacctgaag
agggagataagccgagtctggcccagcctgtcgcagaagaccgtcgacctgctggtgacg
ccccctaaatacaacgagctgaccgtggggaaagtctacgcagctctaatgatctttgac
ttctataagcagacttgtgccaagagactccagcagcagcattcagggggacaacagagt
aaactgggggcgttgttccgtcccatgctggcgctccctcatatacaggaagtagagcca
tcgatctgcagccccaagcagcccctcccgcctgagccagaagccaagccagaagcactg
cccaccaccagcatcccctcggtgaacagggacacgatactgaaccagagaagtgccatc
aaacattcccagtcgggagatgtctctcaggcgacacaacagaggcccaaagtccggagg
aaactacagagaggccagtcagaggacgtgccgtgttccccccggcctcagcaggaattt
gtcgaactgaagcaagtggaggacatatcagacacggaggaatatccaagcctggaaggc
cactgcagagcggcttctctgccccgactcaacgctgagtactaccggagccaccctcgc
cacgtccctgggacccacctggcaccgatcgttgacctcagtcccatcaggcgctcggca
tcctcgctgatgccgcatcgctaccaggaggtcggtctgtcagagtatgacctggagcgg
cccgacttggcccaagacgagggccaggacagagcccagcaccatcaccaccaccaccgc
tgccacagacggagggacaaggacaaagacaagaagcagaagtccctggatagagctgcg
tcaatgcagccgtccagcaccgttgactccttcaccgacccctcagcggaaggtctgtcc
agagaacgggcgagggagcgggaccgcagccggcctcatgagcggaggcaccactcctcg
gcgggagagaagcagcgctactactcctgcgaccgctacggcagccgggagcagtgtcac
accaagtccgccgggcccagtcggtccacgtctcccggagagcgacaggacgcagttttc
gtcaagcagcacggtagcagtgtggtcaaagctggccctggaacgctgccctctggttca
agcactccaggccgcgggcgcaggcagctcccacagacgcccctgaccccgcgccctgcc
gtgacctacaagaccgccaactcctcgcctctccagtccggtgccagcagcgccgcgacg
ggccaccagactcgcgtcagccgtggcttttcagagcacgagcgcttacactggggccac
gacgagtccccgataccggtcacacgcatcggttcggaccctaatttaaaccgccagtcg
caggtcgcctctcgacaggccctcctcgtcgaggacttccaggacactgtgagcagccac
ggaggggggcgctccgccagaaccgccacctccaccacagccgcctcaacttcacatgag
acggccgctgcgcccgtcacagcggccggcgcgcaggggagggcgggggcggttcccaac
gggtaccacttcaccctcggggtcaactctgcgtccgggcctgggagccgaggaacagga
agtctcagggagcgggaggaagaggactggtgctga
DBGET
integrated database retrieval system
