Cyclopterus lumpus (lumpfish): 117740281
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Entry
117740281 CDS
T09199
Symbol
zgc:162472
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117740281 (zgc:162472)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117740281 (zgc:162472)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117740281
NCBI-ProteinID:
XP_034402457
LinkDB
All DBs
Position
12:2242838..2255170
Genome browser
AA seq
2304 aa
AA seq
DB search
MFRRARFSVRPNVGATGKTPQEAPSATPEAGETPKDVGEGGAAVTDHQSVGTSSERPTAS
GDGIEQHGEGTGSSAAVQRRKRFSVKPKVAPGRPSTVARMQKSHVQAASETPDEVPVSDQ
TRTAVAPQRLQSPRRRRPSEDGKQPKASPVPPGGSEPSADDPAANLPAASGEASESASGG
QEKGAPSRPPDDVPLSLPDKEAMEISEKARTLVSSKSGRARSPPAFSLSRLLNDPSDLQR
LAKAQKLRELLRREMHKEKKLKKGNLRVQEFNLDPAKMTMSDLIRYLPQSNPMTSSLEEA
AQENETVVPPTPRREASPERAPEPVVLPKMGSPGAGEGGDEEEEEEEEEEDSSMVPQVKV
AEDGTLIIDEESLTVEVLRAKGPNPAQDRDPIFERGSTTTYASFRKGTYTKPWSNEETDM
FFLAISMVGTDFSMICQLFALRTRSEIKNKFKKEERENSWRVDKAFRERRKLDIEYFSKL
LEKIMEVHKNRKKLRSLAAKNSPKKTERKPKAATKARKPSVVEEGDEKEEKQIADLEEEG
EKENEDLRNEGGADAAKKKKRKRKNRDDAPTGEPDDKKNKKKQDEADVPADTEADCPPSD
MTESANEAADAKIKPAKLSRGKAPKPLVPLGRKRAKKPPPASTETTATDKEDQGVMDGDD
EDQVKSQADGRKSPTEDSEEEDAALQPQRPTRSGRVPKPIQLLNYPAREAAPEASPASPE
GSARPKAKSTAKRRRPSKLPSSQESKKPKLVTLRASQSEYSDEEDEKQRGGGGGGGGGEY
EDEDVEEDEHPVWGSRNDSTAPVFVPASLRSPRPVIPEVEETVEELDILANIPDVLGISH
DALFPDASCERAHSETGAAEPCEHQLDLLVDVIDFLSSDHIEVSENENESYNEAAQTLLT
IGNLAPLPPSEQDQEATQDDATANVNETSRRLEEEISSTPAELEESGAVPSDRGATETSG
AVVELLDGDGVSLVEAIDQRTGFQMDPAPQSPGSSKTNSPQAKKGRSSKAKPKPNLGPAS
RTARSQPGPSAVRGSEESHAVAPRLAPTTETPSAAEDTPKMAECSKNTLGDDISSIGVEP
TEEPSGGEKTSVGEGQPLEKQPQGSSEAQLEPRVEPASGDSGSTSGSTEEVPTAERSCSN
QVTSDTAVTETQLAQESIDHPAPRAPPAEEVPVTQKEESDVGPTQPTRKSRFQKVKPKLN
LAQTSRSLGSKDSPPTPHPKVHEHTTEVEAEPAVTTSSCCPDAASDLIPLVTVGTTLRPT
EEVSTPEEEKSDVGVVGRVEPDAETPHRSVPEAQFPPRREQATRDPTPTSESSAESRCDD
PQPTSDPGVTESLRGGSDLDPAPVTRAEELPAGQKEESDAASPRRRLQKVKPKPNLPPTS
RTARSKPPTTKDSVAPPQPTETPSSQTSRAEDTEDTRAEARLTCSAAPPSPIKSTSASSV
SLCSTQRTTDERSSDVGLDSKGSEQKVPPRRQRFSRVKPNLGSPKSPRTTHAKLQADDLS
KPPEPPGHVDTSFTSEPQPVDDNDAQTKRELTGTDSPRAEPPESGLAIAEYWSLNTDPKG
LAVEGGDRTASTDQVEHAPASQRDQDRSTRSTGSNTRPTGGPSAASDVRSSGGGSTPPTR
TQSAAGSKDEVECEAQSPDSVQQGSEPNHTAAQSSDPSEPTDSPSRRAPQARRGRLVKPK
PRLVPSSRPPPPRQVQNTKRAETGFGAEGVSDLRPDIPDPTEGATVQHRDPNSSPHDADG
CPQAAGGTQSLPIFPDTSAPSSQEPSDPEEPFFILSLTEIPVCSLSEPVAGGPERLPRAP
GANGHQSVPGEAPERLPRAPGTDAPLEHQSSVPGEAPPSSAAAPVEESGEADLVWVWDIE
PAASTTQPGRAMENPVEPHETSTVHPPETETPKEPGGPTRRRVKEPVKPEATKRKQAGKT
LVAKGAASTPIQTDAAGPSELPEASVDVVGESRGGSGDRVDVEKETPTGGGGVPEESGAG
ARATRTRVTRSQNRKPKGFTETDAPPPGKAAPKGPRVRTPRAAGKRLTPAPAASAKRAPP
THTPNASPCPAEAPASQRSDSRKKEEPTSREEEEEPTSRKEEAPTSRKKEEPTSRKEEAP
TSRKKEEPTSRKKEEPTSRKKEEPTSREEEEEPTSREEKEPTSRKEEAPTSRKKEEPTSR
KKEEPTSRKKEEPTSRKEEEPTSRKDEESTSRKEEAPTSRKKEEPTSRKDEESTSRKDEE
STSRKDEESTSREEEESTSREEEESTSRKEEESTSRKKEEPTSRKEEEPTSRKEEEPTSR
EEEEEPTSVSQYFLCDIFTDVEEG
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccgggcgagattcagtgtccggcccaatgtcggcgcgacgggtaaaacgcct
caggaagccccgtcggcaactccggaggccggcgagacccccaaagacgttggcgagggc
ggcgccgcagtgacggaccaccagtctgtcgggacctcgtcggaaagacctacagcctcg
ggggatggcattgagcaacacggagaaggtaccggctcctcggcggcggtccaaagaagg
aagcggttttccgtcaagcccaaagtggcgccgggccgcccctccacagtcgctcggatg
cagaaatcccacgtccaggccgcctctgaaactcccgacgaagtccccgtctcggaccaa
acccggaccgcggtcgcccctcagagactccagtccccgaggagacggaggccttcggaa
gacggcaagcagcccaaagcgagccccgtcccaccgggcggttcagagccttcggccgac
gaccctgcggcgaatctgccggcggcgagcggcgaggcgtcggaaagcgcgtcgggcggt
caagagaaaggagctccttccaggccaccggacgacgtcccgctctcgctgccagacaaa
gaagccatggagatatcggagaaagccaggacgctggtgtcgtccaagagcggtcgcgct
cgctcgccgccggcgttctccttgagccgactcctgaacgacccgtcggacctgcagagg
cttgcgaaggcccaaaaactcagagagctgctcagacgggagatgcataaagaaaagaag
ctcaagaagggaaacctgcgtgtccaggaatttaacttggatccggccaaaatgaccatg
agtgacctgatccgctatctaccgcagtctaaccccatgacatcgagtttagaagaagcg
gctcaagagaacgagactgtggtcccaccgactccaagaagagaagcgtcaccagagagg
gcgccggaacctgtggtcctccctaagatgggaagccccggggcgggggaagggggggat
gaagaagaggaggaggaagaggaggaggaagacagctcgatggttcctcaggtcaaagta
gccgaggatggcacgctgatcattgatgaagagagcttgacggtggaggtcctgcgagcc
aaaggcccaaatccagctcaggaccgagaccccatattcgagcgtggatccaccacgact
tacgcgagcttcaggaaggggacctacacgaaaccctggtccaacgaagagacggacatg
ttcttcctggccatcagcatggtggggaccgacttctccatgatctgtcagctgtttgct
ctccgaacgcgctcagagataaagaacaaatttaaaaaagaagagcgagagaattcctgg
cgggtcgacaaagctttccgagaacggcgcaaactggacattgaatatttttctaagttg
ctggagaagattatggaagttcacaaaaacaggaagaaactccggtcactcgccgcgaag
aattcccccaagaagaccgagagaaagccaaaggcggccacaaaagcccggaagccgagt
gtcgtggaggagggagacgagaaagaggagaagcaaattgccgacttggaggaggaggga
gagaaggagaacgaggacctccgtaacgaaggaggagccgacgccgcgaagaagaagaag
cgtaaaagaaagaaccgagacgacgccccgacgggggaacccgacgacaagaagaacaaa
aagaaacaagatgaggccgacgtacctgcagacactgaggcagactgtccaccatcagac
atgacggagagcgcgaatgaagccgcggacgccaaaatcaagccggctaaactctcacga
ggcaaagccccgaaacccctcgtgcctttgggccggaagcgggctaaaaagcccccgccg
gcctccaccgagaccaccgccacggataaagaggaccagggcgtcatggacggagatgat
gaagaccaggtcaagagtcaagctgatgggaggaagtcgcccacggaggactctgaagag
gaggatgccgcccttcagcctcagaggcctaccaggtctgggagagtgccgaaacccatc
cagctcctgaactaccccgccagagaggctgcacccgaagcgagccctgcctcccccgag
gggtccgccaggcctaaagccaaaagcaccgccaagaggcggagaccgtcgaagctgccg
tcatcccaagagtccaaaaaacctaaactggtcacgctcagggcttctcagtccgaatac
agcgacgaggaggatgaaaagcagcgaggaggaggaggaggaggaggaggaggagaatat
gaagatgaagatgtggaggaggacgagcaccctgtgtggggctccaggaacgacagcacg
gcccccgtctttgtgccggccagcctgcgctcgccgcgacccgtgatcccagaagtggag
gagactgtggaggagcttgatatcttggccaatatccctgatgtgttgggcatctcccat
gatgcactgttccccgacgcctcttgcgagcgggcgcacagtgagacgggcgcagccgag
ccctgtgaacatcagttggatctgctggttgatgttatagacttcctttcttcagaccac
atagaagtatctgagaacgagaacgagagctacaacgaggcggctcaaaccctgctgacc
atcggtaacctggctcccctccctccgtcggaacaggaccaagaagccactcaagatgat
gcaacagccaatgtgaatgaaaccagccggcgcctggaagaagagatctcatcgacgccg
gctgaactggaggagagcggtgccgttccttctgaccgcggagcaacggaaacatcagga
gccgtcgtggagctcctagacggtgacggcgtctccctcgttgaagccattgatcagagg
acgggtttccagatggaccccgcccctcaaagtccagggagctcaaagacgaattctcca
caggccaagaagggacgctcctccaaggcgaagccaaaacccaacctgggcccggcctcg
aggaccgctcggtcccaaccggggccatcggcggtaaggggatccgaggagagccacgcg
gttgctcctcgcctcgctccaaccacggagacgccgtcggctgcagaggacacccccaag
atggcagagtgcagtaaaaacacgctaggagatgacatttcttctatcggagtcgagccc
acagaagagccatctggaggtgagaagacgtctgttggtgaaggacaacccctcgaaaag
cagcctcaaggctcttctgaagcccagctggaaccccgtgtggagccggcctccggagac
tcggggtcaacgtccgggtcgacagaggaagtgccgaccgctgagagaagctgtagcaac
caggtgacgtctgacacggcggtcacagaaacccagttagcccaagagagcatcgaccat
cctgctccacgtgctccacctgcagaggaggtacccgtcactcagaaagaagagagtgac
gtgggacctactcagccgaccaggaagagtcggttccagaaagttaaacccaaactcaac
ttggcacagacatccaggagtctgggttctaaagactcccccccaactccacaccccaaa
gtccatgaacacacaacagaggtcgaagcagagccagctgtcaccacctcgagttgttgt
cccgatgctgcttccgatttgatcccactggtgactgtagggacgactctcaggcccaca
gaagaagtatccacacctgaggaggagaagagcgacgttggagtcgttggtcgagtagaa
ccggacgcagaaacaccccatcggagtgttcctgaagcccagtttccacccaggagggaa
caggccacacgagacccaacgcccacgtcagagtcctcggctgagagccgctgtgatgac
ccacagccgacctccgacccgggagtcacagagtccctccgaggaggttcagacctggac
ccggctcccgtcactcgtgcagaggagctccctgccggtcagaaagaggagagcgacgcc
gcttctcccagacgtcggttacaaaaagtcaaacccaaacccaacctgccgccgacgtcc
agaaccgcgaggtctaaacccccgaccaccaaggactccgtcgcaccgccgcagcccacg
gagacgccctccagccagacttcacgggccgaagacaccgaagacacgagggcagaagca
cggctgacttgcagcgccgcccctccgagcccaattaaaagtaccagcgcctcttcggtg
tcattgtgctcgacgcagagaaccacagacgaaaggtcctcagatgttggactagactcc
aagggctcggaacaaaaggttcctccaagaaggcaacgcttttccagggtcaaacccaat
ttaggatcccctaaaagccccagaaccacacacgcaaagctgcaggcagatgacctcagc
aaacccccagaaccaccgggccacgtggacacctctttcacctcggaaccacagccggtg
gacgataacgatgcacagacgaaacgggagctcacggggacggactcgccgcgtgcagaa
cctccagagtccggcctcgccatagcggagtattggtctctgaatacagaccctaaaggc
ctcgcagtcgaaggaggggacagaacggcaagtactgatcaggtggagcacgcacccgcc
tcccaacgggaccaggaccggtccacgcggtctaccgggtcaaacacccgaccgacgggc
ggcccgagtgcagcgtcggatgtccggtcctcaggaggcggctcgacgccccccaccaga
acacagtccgcggccggttctaaagatgaggtcgagtgtgaggcgcagagtccagattca
gtccagcaaggttctgagcccaatcacacagctgcccagagcagcgatccgtcagaaccg
accgactcgccctcgagaagagctccgcaggctcgcagaggccggctcgttaaacccaaa
ccccgtctggttcccagcagccgacctccgccaccccgacaggtccagaatacaaaacgg
gcagaaacaggttttggcgcagaaggcgtgtccgacctcagacctgacatcccagaccca
acagagggcgctactgtacaacacagagacccaaactcctctccacatgatgctgacggg
tgtcctcaggctgcaggagggacccaaagtctccccatatttccagacacctcggcgccg
tcgtctcaggagccttcggatccagaagaaccgttcttcatcctctctctgacggagatc
cccgtctgctcgctgagcgagccggtggccggcgggcctgaacgcctccctcgtgctcct
ggagccaatgggcatcagagcgttcccggagaagcgcctgaacgcctccctcgtgctcct
ggaaccgatgcgccgcttgagcatcagagcagcgttcctggagaagcgcctccttcttct
gccgctgcgcccgtggaggagagcggcgaggcggacctcgtctgggtctgggacatcgag
ccggctgcgtctacgactcaaccgggtcgggcgatggagaatcccgtggagccacacgag
acttctacagtccatccacctgagactgaaacccctaaagaacccggtggcccgactcga
agaagagtcaaagagccggtgaagcccgaggctacgaagcggaagcaggccggcaagacc
ctcgtagccaagggagcggcgtcgacccccatccagacggacgccgccgggccctcggag
ctccccgaagcctccgtggacgtggtcggcgagtctcggggaggaagtggtgatcgtgta
gatgttgagaaggagactccgacggggggaggaggcgtgcctgaggaaagcggcgcagga
gcacgagcgacccggacgagggtgacgagaagccagaacagaaaacccaaaggctttacg
gagaccgacgcccctccacctggcaaagcagcccccaagggcccgagggttagaactcca
cgtgcagctggaaaacgcttgaccccggcgcccgcggcctcggcaaagcgggcgccgcca
acacacacgccgaacgcttccccgtgtccggccgaggctccggcttctcagaggagtgac
tccagaaagaaggaggagcctacctccagagaggaggaggaggagcccacctccaggaag
gaggaggcgcctacctccagaaagaaggaagagcccacctccaggaaggaggaggcgcct
acctccagaaagaaggaagagcccacctccagaaagaaggaagagcccacctccagaaag
aaggaggagcccacctccagagaggaggaggaggagcctacctccagagaggagaaagag
cccacctccagaaaggaggaggcgcccacctccagaaagaaggaagagcccacctccaga
aagaaggaagagcccacctccagaaagaaggaggagcccacctccagaaaggaggaggag
cccacctccagaaaggatgaggagtccacctccagaaaggaggaggcgcccacctccaga
aagaaggaagagcccacctccagaaaggatgaggagtccacctccagaaaggatgaggag
tccacctccagaaaggatgaggagtccacctccagagaggaggaggagtccacctccaga
gaggaggaggagtccacctccagaaaggaggaggagtccacctccagaaagaaggaagag
cccacctccagaaaggaggaagagcccacctccagaaaggaggaagagcccacctccaga
gaggaggaggaggagcccaccagcgtgtcccagtacttcttatgtgacatttttacagac
gtggaggagggatga
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integrated database retrieval system
