Cyclopterus lumpus (lumpfish): 117740282
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Entry
117740282 CDS
T09199
Symbol
mef2ca
Name
(RefSeq) LOW QUALITY PROTEIN: myocyte enhancer factor 2ca
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117740282 (mef2ca)
04371 Apelin signaling pathway
117740282 (mef2ca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117740282 (mef2ca)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
117740282 (mef2ca)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
117740282
NCBI-ProteinID:
XP_034402461
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Position
12:complement(3283762..3299779)
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AA seq
452 aa
AA seq
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MGRKKIQIARIMDERNRHVTFTKRKFGLMKKAYELSVLCDCEIALIVFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNNDIVETLRKKGLNGCDSPDIEADDSAGQSPESDDKYRKI
TEDIDLMINRQRICGLVPSSYDMGVSIPASNPSGLLYSHSGISCGMGTHNLLPASHLQRN
LSPQRPPSTGLMSSELQTAAVSSVGNSSYSHLMSPGGVSRSLQEKSPPPMGLSRKPDLRT
LMPPNNNNNNNNKCSTLPSINQRINHSQTAQTLSSPVVSLTGSTLPPQLMGGYPSPLSSS
YGTEFSLSSDLSSLSGFGGSGLGSVSNWQQIQNLQHSALGHMGTLCQNSNLNLHPNLHIK
SEPASPPRDRGCVDMMGGGGGLVGGCVTAGGYSASAAGRSPGDSASSCGSSYEGSEEREE
HHGNFLLQPLANHEERHSPSVKRMRLSEGWAT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacgaattatggacgaacggaaccgacatgtgacg
ttcaccaagcgtaagttcgggctgatgaagaaggcgtacgagctgagcgtgctgtgcgac
tgcgagatcgccctcatcgtgttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctcctgaagtacaccgagtacaacgagccgcacgagagccgcacc
aacaacgacatcgtggagacgctgcgtaaaaaaggcttaaacggctgcgacagccccgac
atcgaggccgacgactctgcgggtcagagccccgagtccgacgacaagtaccgcaagatc
acggaggacatcgacctgatgatcaacagacagaggatctgtggtctggttccctccagc
tacgacatgggcgtctccatcccagccagtaatcccagtgggctgctgtactcccactct
gggatcagctgtgggatgggaacccacaacctgctgcccgcctctcacctgcagaggaac
ctgtcgcctcagaggccgccgagcacaggactgatgagctccgagctgcagacggctgct
gtctccagtgtgggaaacagcagctacagccacctcatgtctccagggggcgtctccagg
agcctgcaggagaagagtcctcctccgatgggcctgagccgtaagcccgacctgcggacc
ctgatgccccccaacaacaacaacaacaacaacaacaagtgcagcaccctgccctccatt
aaccagaggataaatcactcccagacggctcagacgttgtcgtctccggtcgtttccctg
actggttcaactcttcctcctcagctgatgggcggctacccgtctcctctctcctcctcc
tacggcacagagttctccctcagcagcgacctctcctctctgtccgggttcgggggatcc
ggtctcggatcggtatccaactggcagcagatccagaatctgcagcactcggcactcgga
cacatggggaccttgtgtcagaactcgaacctgaacctccacccaaacctgcacatcaag
tccgagcccgcctcccctcccagggaccgggggtgcgtcgacatgatgggcggcgggggg
gggctggtcggagggtgcgtgacggcgggcggctactccgcctccgccgcgggccgctcg
cccggcgacagcgcgtccagctgcgggagctcgtacgagggcagcgaggagcgcgaggag
caccacgggaacttcctcctgcagccgctggccaatcacgaggagcgccacagcccgtca
gtcaaacgcatgaggctatcggaggggtgggccacatga
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