Cyclopterus lumpus (lumpfish): 117740304
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Entry
117740304 CDS
T09199
Symbol
hpse
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00531
Glycosaminoglycan degradation
clum01100
Metabolic pathways
Module
clum_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117740304 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117740304 (hpse)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117740304 (hpse)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Enzymes
117740304 (hpse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
117740304
NCBI-ProteinID:
XP_034402511
Ensembl:
ENSCLMG00005010845
LinkDB
All DBs
Position
12
Genome browser
AA seq
551 aa
AA seq
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MESTRLPLVLVLALLWTQTTGDLDRNSSVLKVDLSVAIRRVDRRFLSVTIDASLAAEERF
MSLLSSPKVRTLAKALSPSFLRFGGTRQDFMVFTPQGVRQDSGYPADESCDRLQLPVWPE
DQLKKDWTRQQLTLMREDLQGKYRRVQYTEYTVDLLHSFTRCSGMDLIFGLNALLRTANN
TWNSSNAAALLRYCESRRYHMSWELGNEPNSYEKKAGIRVDGNQLGRDFTRLRAMMSRSK
SYRHAGLFGPDVGQPRDHRADLLEGFLQTGAEAVDACTWHHYYVNGRDASLEDFLDPEVL
DTLAFKTKEVLEKVKLVSPEKPVWLGETSSAYGGGAAGLSDTFAAGFMWLDKLGLAARLG
LDVVMRQVFIGSGSYHLVDENLDPLPDYWLSVLYKRLVGPEVLQVEAAGEAGRRRVRLYL
HCSSRERCSCFGITCSLCRPSCSDGSSLYRYPSGAVTLFSMNLSHRPVRVSLPARLSSGS
VEAFVLQADRPGEEGLYSRCVRMNGDVMKMKDDETLPDMKGARLPPSEQLQLPAFSLNFF
IFTGAGAPACL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagtccacgaggctgccgctggttcttgttctggctctcctctggacccagaccacc
ggagacctggaccggaactcttcggtcctcaaggtggacctctccgtggcaatccgccgg
gtggaccgacgctttctgtccgtcaccatcgacgcgagcctggccgcagaggagaggttc
atgtccctgttgagctctccgaaggtcaggacgctggcgaaggccttgagtccgtctttc
ctgaggtttggggggacgagacaagacttcatggtcttcaccccccagggggtccgtcag
gactccgggtaccctgcagatgagtcctgtgatcggctgcagctgccggtctggccggag
gaccagctgaagaaggactggacccggcagcagctgaccctgatgagagaagacctgcag
gggaagtacaggagagtccagtacacagagtacaccgtagacctgctgcactccttcacc
agatgttctgggatggatctgatcttcgggctgaacgctctcctcagaaccgccaacaac
acgtggaacagcagcaacgccgccgccctgctgcggtactgtgagtccagacggtaccac
atgtcctgggagctgggcaacgaaccaaacagctacgagaagaaagccgggatccgagtg
gacggaaaccagctgggacgggatttcactcgtctcagggcgatgatgtcacggtccaaa
tcctaccgccacgccgggctgttcgggccggacgtcggtcagcctcgagaccaccgggca
gacctactggagggcttcctgcagactggagctgaggctgtggacgcctgtacttggcac
cattattacgtgaatggaagagacgcgtctctggaggattttctggaccctgaggttctg
gacactctggccttcaagaccaaagaagtcctggagaaagtaaagctggtttctcctgaa
aaaccagtttggctcggagagaccagttcggcgtacggaggaggagctgctgggctgtcg
gacacgttcgccgcaggattcatgtggttggataaactgggcctggcagccagactgggc
ctggatgtggtgatgcggcaggtgttcattggctctgggagttatcacctggtggatgaa
aacctggatccacttcctgactactggctgtccgtcctctacaagaggctcgttggtccg
gaggtgctgcaggtggaagctgccggcgaggctggaaggaggcgcgtgcgtctgtacctg
cactgctccagcagagagaggtgctcctgcttcggcatcacatgctctctgtgtcggcca
tcttgttctgacggctcctccctgtacaggtacccgagcggagcggtcacgctcttctcc
atgaacctcagtcacaggccggtccgggtctcacttcctgcccggctctcctccggctca
gtggaggcctttgtgctgcaggcagaccggccgggggaggaggggctctactccaggtgt
gtgaggatgaacggagacgtgatgaagatgaaggacgatgaaactcttcccgacatgaaa
ggagctcgtcttcctccgtctgagcagctgcagcttccggccttctccctgaacttcttc
atcttcacgggcgctggagcgccagcctgtctgtga
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