Cyclopterus lumpus (lumpfish): 117740309
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Entry
117740309 CDS
T09199
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04210
Apoptosis
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117740309 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117740309 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117740309 (sptan1)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117740309 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
117740309 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
117740309
NCBI-ProteinID:
XP_034402523
Ensembl:
ENSCLMG00005005989
LinkDB
All DBs
Position
12:21105561..21149702
Genome browser
AA seq
2460 aa
AA seq
DB search
MDTAGAKVLETAEDIQERRQQVLDRYRRFKELSIMRRTKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGHLMISEGHFSSETI
RTRLEELHRLWDLLLQRTKEKGTRLLQAQKLVQYLRECEDALDWISDKEAMASSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLVQEAHPEAELIVRKQDEVNAAWQRL
KGFAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAERLQQTHPQNATQIHLKKDELVTNWEQIRTLAAERHAHLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRAT
DEAGQALLNTGHYASEEVKEKLGVLAEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVAERMEEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVLRYEALREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHDPRI
KAVTQKGEAMVEEGHFAGEEVKVKLSELHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIALRQDQIENQYGTLLEFGEKRKDMLEKSCKKFMLFREA
NELQQWINEKESALTNEEMGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESE
GLMAEEAPMVQAQQQELLGAAPGQDEADSKTASPWKNIRLAVQTTANFNTIKELNNRWRS
LQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEG
FERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKDKLGN
SHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQA
FEQFGQQLLVRGHYASPEIQQKLEALDRERADLEKAWVQRRMMLDQCLELQLFNRDCEQA
ENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLIGTDHY
AKPEIFNRRTEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDE
SYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNTLIQRGACAGSEDAVKAR
LSALDEQWQFLVNKSAEKSHKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLAS
VNNLLKKHQLLEADISAHEDRLKDLNGQADSLMAGTAVDTSQVKDKRDAVNGRFTKIKSM
AAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAE
LGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVHHWKELKDLSGARGQRLEESLEY
QQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCTN
GEELIKKNNHHVDNISAKMSALRGKVSELERAAAQRKAKLDENSAFLQFNWKADVVESWI
GEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALQDQLLAAKHVQSK
AIEARHAALIKRWNQLLSNSAARKKKLLEAQEHFRKVEDLFLTFAKKASAFNSWFENAEE
DLTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFGQLAELDQQIKSYQVVSNPYTWFTM
EALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGS
CMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQ
QWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCL
RSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESA
FRALSTENKPYVTKEELYQNLSKEQADYCLSHMKPYLDSKGRELPTAFDFVEFTRSLFVN
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgctggggctaaagtgctggagacagctgaagacatccaggagcgccgacag
caagtgctggaccgctaccggcgcttcaaggagctgtccataatgcgccggacgaagctg
gaggactcctaccgcttccagtttttccgccgcgacgccgacgagttggagaaatggatc
caggagaagctgcagatcgcctctgatgagaactacaaggacccctccaacctgcagggt
aagctgcagaaacatcaggcctttgaagctgaagttcaagccaatgctggggctatcatc
aaactggacgagactggacacctaatgatcagcgagggacacttctcctctgagaccatt
cgaactcgtctggaggagctgcatcgcttatgggaccttctgctgcagaggaccaaggag
aagggcacgcgtctgttgcaggcccagaaactggtccagtacctgcgagagtgtgaagat
gccctggactggatcagtgacaaggaggccatggcctcctctgaggagctgggccaggac
ctggagcatgtggagcttctgcagaagaagttcgaggagttccagactgacctggctgcc
cacgaggaacgtgtgaatgaggtgaaccagctggcagccaagctggtccaggaagcccat
cctgaggctgagctcatagtccgcaagcaggacgaggtcaacgcggcctggcagcgcctg
aagggcttcgcccagcagaggcagggcaagctgtttggggctgctgaggtgcagcgcttc
aacagggatgtggatgagaccatcagttggatcaaggagaaggagcagctgatggcctct
gatgactttggtcgtgacctggccagtgtgcaggccctgcttcgcaagcacgaggggctg
gagagagatctggctgccctggaagataaggtcaacacactgggtggtgatgcagagcgt
ctacagcagacacatccacagaatgccacacaaatccatctgaagaaagacgaactcgtc
accaactgggaacagattcgcaccctggccgctgagcgccacgcccatctgaacgactcc
taccggctgcagcgtttcactgctgacttcagggacctgaccagctgggtgacggagatg
aaagccctgatcaatgctgacgaactggccaatgacgtggctggagctgaggctctgctc
gaccgccaccaggagcacaagggggagattgatgctcacgaagacagctttagagccacg
gatgaagctggccaggccctgctcaatacaggtcactatgcttctgaagaggtcaaggaa
aagctgggcgtcctcgctgaggagaaggagtctctgctggagctgtgggaggttcgcagg
cagcagtatgagcagtgcatggacctgcagctcttctacagagatactgagcaagttgac
aactggatgagcaaacaagaggctttcctccttaatgaagaccttggtgactccctggac
agtgttgaggcactgctgaagaaacacgaggactttgagaagtcccttagtgcccaggaa
gagaagatcactgccctggatgagtttgctactaaactcatccagaacaaccactatgcc
aaagaggacgtggccacccgcagagatgctctgctcagtcggcgtaacgccctgcatgag
cgcgctcagtcccgtcgcgctgccttggaggactcgttccacctgcagcagttcttcagg
gactctgatgagctcaagagctggatcaacgagaagatgaagaccgccacggacgaggcc
tacaaggacccctccaacctgcagggcaaggtgcagaaacaccaggcctttgaagctgag
ctgtcagctaatcagagccgcattgatgccctgcagaagtctggccaggagctgctggat
gggaagcattatgcctctactgaggtggctgagcgcatggaggaagtcagctcccagtgg
aagaagctgctggaggccactgagctgaaaggcatcaagctccgcgaggccaaccagcag
cagcagttcaacaggaacgtagaggacattgagctgtggctgtatgaggtggagggccac
ctggcttcagacgactatgggaaagacctgactagtgttcagaacctgcagaagaagcat
gcactgctggaggccgatgtggctgctcaccaggatcgtatcgatggcataacaatccag
gctcgccagttccaagaggcgggacactttgatgctgacaacatccgcaagaagcaggaa
gcgttagtgctgcgctatgaagctctgcgtgagcccatggcggcacgcaagcagaagctg
tctgactctctgcggctccagcagctgttcagagacgtggaggacgaggagacttggatc
cgagagaaagagcccattgctgcctctactaacagaggcaaagacctgattggtgtccag
aacctgctgaagaagcaccaggcgctgcaggcggagatcaccggtcatgatcctcgcatt
aaggctgttacccagaaaggagaggccatggtggaggaaggacactttgctggagaggaa
gtgaaagtgaagctgtcagaactacatggccgctgggacacgctgaaggctaaggcctcc
cagaggagacaggatctggaggactctctgcaagcccagcagtactttgctgatgccaac
gaggccgagtcctggatgagggagaaggagcccatcgtagggagcacagactacggcaaa
gacgaagactcggctgaggctttgctgaagaagcatgaggccctgatgtctgacctgagt
gcttatggcagcagcattcatgctctgaaggaacaggcccagtcctgcaggcaacaagta
gcaccgacggatgatgagaccgggaaggagctggtcctggccttgtacgactaccaggag
aagagtccccgtgaagttaccatgaagaagggggacatcctcaccctgctcaacagcacc
aacaaggattggtggaaggtggaggtgaacgatcgccagggctttgttcctgctgcttat
gtgaagaagctggaccctacccagtcctcgtccagagaaaacctgctggatgaacacggc
agcattgcactgcgccaagaccagattgagaatcagtatggtactctgttggagtttgga
gagaaacggaaggacatgctggagaagagctgcaagaagttcatgttgttccgtgaggcc
aatgagctccagcagtggatcaatgagaaggagagtgccctcactaatgaagagatgggc
tctgacctggagcaggtcgaggtcctgcagaagaagtttgacgacttccagaaggaccta
aaggccaatgagtctcgcctgagggacatcaacaaagtggcgtctgagctggagtctgaa
ggcctcatggctgaggaggcccccatggttcaggctcagcaacaagagctgctcggtgct
gctcctggccaggatgaagccgattccaagactgcatctccatggaagaatatacgcttg
gctgttcaaacaacggctaactttaatactatcaaggagctgaacaatcgatggaggtcc
ctgcagcagctggctgaagacaggagcaacatgctgggcagtgcccacgaggtgcagagg
ttccacagggatgctgatgaaactaaagagtggatcgaggagaagaaccaggccctcaac
actgacaactatggtcacgacttggccagtgtccaggctctgcagcgcaaacacgaaggc
ttcgagagagacctggcagctctgggggataaggtgaactctcttggggagacagcggag
cgtctgatccagtcccacccagaggcagtggatgacatccaggagaaatgcactgagctg
aacactgcctggagcagcctggtgggacgagctgatcagcgcaaagacaagcttggcaac
tcccacgacctgcaacgcttcctctctgacttcagagatctgatgtcctggatcaacggt
atacgagggctggtgtcctcggaggagctggccaaagacgtgacgggagccgaggccctt
ctggaaagacaccaggaacaccgcacagagattgatgctcgtgccggtaccttccaggcc
tttgaacagtttggtcagcagctgcttgtgcgaggccactatgccagtcctgagatccag
cagaaactggaggctctggaccgtgagcgcgccgacctggagaaggcctgggtgcagcgt
cgcatgatgctggaccagtgcctcgagctccagctcttcaacagggactgtgagcaggct
gagaactggatggcagcccgtgaagccttcctcgctagtgatgacaagggtgactccctg
gacagtgtggaggccctaatcaagaaacatgaagactttgacaaggccattaacgtgcag
gaggagaagattgctgctctgcagtcctttgctgaccagctgattggaactgatcattat
gccaaacctgagatcttcaaccgccgcactgaagtcctcgacaggtggcgccggctgaag
gctcagatgatcgaaaagcgctccaagctcggtgaatcccagaccctgcagcagttcagc
agggacgtggatgagattgaggcctggatcagcgagaagctgcagactgcaactgatgag
tcctacaaggaccccaccaacatccagctgtccaagctgctgagtaagcatcagaaacat
caggcgttcgaggcggagctgcacgccaacgcagaccgaatccgaggggtcatcgacaca
ggaaacaccctgatccagagaggagcctgtgccggcagcgaggacgcagtcaaggcgcgc
ctcagcgctctggatgaacagtggcagttcctcgtcaacaaatctgcagagaagagccac
aaactcaaagaagccaacaagcagcagaacttcaacacgggcatcaaagactttgacttc
tggctctctgaggtggaagctcttctggcctctgaggattatggcaaagatctggcttca
gtgaacaacctgctgaagaaacaccagctgctggaggcggacatctctgcccatgaggac
cgcctgaaggatctgaacggccaggccgacagcctgatggccggcaccgccgtggacacc
tcgcaggtgaaggacaagcgcgacgccgtcaacggccgcttcacgaagatcaagagcatg
gccgccggccgccgcgccaagctcaacgagtcccaccgcctgcaccagttcttcagggac
ctggatgatgaagagtcttggatcaaagaaaagaagctgcttgtgagttcggaggactac
ggacgtgatttgacaggagtgcagaatctgaggaagaagcataagaggctggaggccgag
ctgggagctcacgagccggccattcagtcggtgctggacactgggaagaagctgtctgat
gacaacaccatcggccaggaggagatccagcagaggctggcccagtttgtccaccactgg
aaggaactcaaagacttatctggagcacggggacagaggctggaggagtcactggagtac
cagcagtttgtggcgaacgtggaagaggaagaggcttggattaatgagaagttgaatcta
gtggggagcgaggactacggagataccctggctgctgtgcagggcttgctgaaaaagcac
gaagcatttgagactgacttcaccgtgcacagggaccgagtcaacgatgtgtgcactaac
ggggaggagctgatcaagaagaacaaccaccacgtagacaacatcagtgccaagatgtcg
gctctgagaggcaaagtgtctgagctggagagggccgccgctcagaggaaggccaagctg
gacgagaactctgccttcctgcagttcaactggaaggccgacgtggtggagtcctggatc
ggtgagaaggagaacagcctgaagactgatgactacggcagagacctgtcctcagtccag
actctgctcacgaagcaggagacgttcgatgccggtctccaggccttccagcaggagggc
atcaccaacattacggctctccaggaccagctgctggccgccaagcacgtccaatcaaaa
gccatcgaagcgcgtcacgccgccttgattaagcgctggaaccagctgctgtccaactca
gccgctcgcaagaagaagcttctggaagctcaagagcacttcagaaaggttgaggacttg
ttcctgacatttgccaagaaagcttcagccttcaacagctggtttgagaatgcagaggag
gatctgacggacccggttcggtgcaactctctggaggagatccgggcgctgcgtgaagcc
cacgaggccttccgctcctcgctgagctcggctcaggccgacttcggccagctggccgag
ctggaccagcagatcaagagctaccaggtggtgtccaacccctacacctggttcactatg
gaggccctggaggagacctggagaaacctgcagaagatcatcaaggagcgagagctggag
ctgcagaaggagcagaggaggcaagaagaaaacgacaagctgcgtcaagagtttgcacag
cacgccaatgcgttccaccagtggctgcaggagaccaggacatatcttctggatgggtcg
tgtatggtggaggaatctggaaccctggagtcccagctggaggccaccaagcgtaagcac
caggagatccgggccatgcgcagccagctgaagaagattgaagacctgggtgcagctatg
gaggaagcgctgatcttggacaacaagtacacagagcacagcacagtgggcctggcccag
cagtgggaccaactggaccagctgggaatgaggatgcagcacaacctggagcagcagatc
caggccaggaacaccactggagtgacagaggaggccctgaaggagttcagcatgatgttc
aagcacttcgacaaggagaagtccggccgtctcaaccaccaagagttcaagtcgtgtctg
cgctcgctaggatacgacctgcccatggtggaggaaggagaaccggatccggagtttgag
gccatactcgacaccgtggatccaaacagggatggcaacgtgtcgctgcaggagtacatg
gccttcatgatcagtcgcgagacggagaacgtgaagtccagtgaggagatcgagagcgcc
ttccgagctctcagtacagagaacaaaccctacgtcactaaagaagagctctaccagaac
ctgagcaaggagcaggcggactactgcctctcacacatgaagccctatctcgacagcaag
ggccgagagctgccgacagctttcgactttgttgaattcacccgctcgctcttcgtcaac
tga
DBGET
integrated database retrieval system
